Survey of cyanomyovirus abundance in Shantou coastal waters by g20

To understand the genetic diversity and population changes in cyanophages in the coastal waters of Shantou,northeast South China Sea,we used the capsid assembly protein gene g 20 as a marker of the abundance and phylogeny of natural cyanomyovirus communities. The abundance of total viruses,heterotrophic bacteria,and picophytoplankton in the coastal waters was monitored with flow cytometry. Hydrological parameters(NO ˉ 3,NO ˉ 2,NH 3,soluble reactive phosphorus,total dissolved nitrogen,total dissolved phosphorus,dissolved oxygen,chemical oxygen demand,temperature,salinity,and chlorophyll a concentration) and microbial abundance(total viruses,total bacteria,P rochlorococcus,Synechococcus,and eukaryotes) were measured in the upper and lower layers at four sampling sites in the research area. In the direct viral counts,cyanomyoviruses accounted for 1.92% to 10% of the total viral community. A phylogenetic analysis showed that the g 20 sequences in the Shantou coastal waters were very diverse,distributed in eight distinct operational taxonomic units,including the newly formed Cluster W. The g 20 gene copies inferred from real time PCR assay indicated that cyanomyoviruses were correlated significantly with the heterotrophic bacteria numbers and the nitrate and chlorophyll a concentrations. These results suggest that cyanomyoviruses are ubiquitous and are an abundant component of the virioplankton in Shantou coastal waters.     

Effects of dietary supplementation of Ulva pertusa and non-starch polysaccharide enzymes on gut microbiota of Siganus canaliculatus

Fishes represent the highest diversity of vertebrates; however, our understanding of the compositions and functions of their gut microbiota is limited. In this study, we provided the first insight into the gut microbiota of the herbivorous fish Siganus canaliculatus by using three molecular ecology techniques based on the 16 S r RNA genes(denaturing gradient gel electrophoresis, clone library construction, and highthroughput Illumina sequencing), and the Illumina sequencing technique is suggested here due to its higher overall coverage of the total 16 S r RNA genes. A core gut microbiota of 29 bacterial groups, covering 99.9% of the total bacterial community, was found to be dominated by Proteobacteria and Firmicutes in fish fed three dif ferent diets with/without the supplementation of U lva pertusa and non-starch polysaccharide(NSP) enzymes(cellulase, xylanase, and β-glucanase). Diverse potential NSP-degrading bacteria and probiotics(e.g., R uminococcus, Clostridium and Lachnospiraceae) were detected in the intestine of the fish fed U. pertusa, suggesting that these microorganisms likely participated in the degradation of NSPs derived from U. pertusa. This study supports our previous conclusion that U. pertusa-based diets are suitable for the production of S. canaliculatus with lower costs without compromising quality.     

2010年度海洋与极地科学领域基金项目的受理与评审

1 2010年度申请项目受理和同行通讯评议情况1.1项目受理情况2010年地球科学四处(资助范围:海洋科学与极地科学)共受理申请项目936项,其中包括面上项目500项、青年基金426项和地区基金10项,申     

养殖浅色黄姑鱼体表溃烂症病原菌的分离与鉴定

浅色黄姑鱼的高密度养殖一直受到病害的困扰,导致成鱼养殖成活率低,直接影响了浅色黄姑鱼养殖业的发展.以汕头南澳岛患皮肤溃烂症的养殖浅色黄姑鱼为材料,从其溃烂头部组织中分离得到优势菌KLg,人工感染实验证实菌株KLg为浅色黄姑鱼的致病菌.药敏试验表明菌株KLg对头孢哌酮、红霉素、头孢曲松、先锋霉素V、复达欣、头孢呋辛和氧哌嗪青霉素等7种抗生素敏感,革兰氏染色、生理生化测定等手段初步确定菌株KLg为哈维氏弧菌(Vibrio harveyi),这一结果通过16S rDNA基因序列及进化树分析得到进一步确认.哈维氏弧菌是海水养殖鱼类的常见致病菌,但在浅色黄姑鱼养殖中尚属首次报道.实验结果可为我国沿海地区浅色黄姑鱼养殖中弧菌病害的防治提供重要参考.     

深海微生物极端酶的研究进展

21世纪是海洋的世纪,海洋生物资源的开发和利用已成为世界各海洋大国竞争的焦点之一,其中基因资源的争夺更是焦点中的重点.