Preservation of the shell matrix protein dermatopontin in 1500 year old land snail fossils from the Bonin islands

Organic molecules such as proteins can be preserved in certain fossils. The bulk properties of fossil proteins of both vertebrates and invertebrates have been studied for over half a century. Named proteins have so far been identified, however, only in vertebrate fossils, such as collagen from mammoth bones. Using immunological assays, we examined 1500 year old fossils of the extinct land snail Mandarina luhuana from the Bonin islands for the presence of dermatopontin, a molluscan shell matrix protein. First, we examined the shell microstructure and mineralogy of the fossil shells using scanning electron microscopy (SEM) and powder X-ray diffraction (XRD) in order to estimate the extent of diagenetic alteration. The results suggest that the original microstructure and mineralogy of the shells are preserved. Antiserum raised against the Type-1 dermatopontin fragment of the living land snail Euhadra brandtii showed significant immunological reactivity with the extracts from the fossil shells of M. luhuana. Immunological binding curves drawn for the shell extracts of extant M. aureola and the extinct M. luhuana confirmed the presence of dermatopontin in the fossil shells and provided an estimate that about 75–98% of the original dermatopontin was lost from the M. luhuana fossils. This is the first report of a named protein being identified in invertebrate fossils.     

Sedimentation of terrigenous red soils in coastal area adjacent to an estuary and coral reefs,the Okkubi River estuary,Okinawa Island,Japan

Sedimentation process of fine-grained terrigenous red soils was observed on the seafloor by coral reefs near an estuary using a paired mooring of turbidity meter and sediment trap or a mooring of sediment trap and current meter. Silty clays contained in the bottom calcareous sands were mainly resuspended and trapped in both surface and bottom layer traps, at noncatastrophic normal sedimentation periods. In addition, silty clays were supplied to this mooring site by inflowing river. Turbidity and the flux rate determined by sediment traps show certain relationship accompanied with the coefficient, which is changed by precipitation, current, and other conditions. Resuspension process caused by a typhoon was recorded as both core sequence of sediment trap and time-series data of bottom current. Maximum velocity of 49.5 cm/s was recorded from bottom currents resulting from the passing of attyphoon at the mooring site. A graded sand layer is interbedded in dark-gray, silty clay and considered to be a resuspended sediment resulting from the passing of the typhoon. Flux of the resuspended sediments by the typhoon was estimated from this core sequence and compared to the flux observed at the normal sedimentation.     

An energy conversion method in the ocean using the density difference of water

A new method which produces energy from the ocean by utilizing the density difference of water, by means of a “chimney effect”, is proposed. Density difference of water in the ocean occurs in two ways, namely differences of consistency and water temperature. For instance, fresh river and melting floes and icebergs are pointed out as some origins of the former, while thermal effects of volcanoes and hot springs may account for the latter. Furthermore, sunlight power transmitted into the sea through glass fibre power lines can be an artificial source in the latter case.This paper concentrates on regions near estuaries where low density river water can be piped into the high density ocean. An analysis estimates that the proposed method extracts energy of several thousands or more kW in the above case.     

Full-range equation for wave boundary layer thickness

Full-range equation covering all the flow regimes in a wave boundary layer is proposed for the boundary layer thickness. The results are compared with the available experimental data and good agreement has been found. In case of wave boundary layers, there are three definitions of boundary layer thickness in use. Therefore, the full-range equation is derived for three of the definitions. The findings of this study may be useful in calculating suspended sediment transport in coastal environments and studying wave–current combined motion.     

Air-Sea Gas Transfer Velocity in Stormy Winter Estimated from Radon Deficiency

Thirteen vertical profiles of ²²⁶Ra and ²²²Rn in the near-surface water were obtained in the western North Pacific in winter, and the gas transfer velocities across the air-sea interface were estimated. The transfer velocities found by applying a steady state model varied widely from 2.1 to 30.2 m day⁻¹ with a mean of 9.4 m day⁻¹. The mean value is almost 5 times higher than that in summer in other oceans, and the maximum value is a record high for world oceans. This is partly due to the inadequacy of the steady state model, which overestimates when stronger winds blow in more recent days than the ²²²Rn half-life of about 4 days. In fact, a strong low pressure zone passed through the station about 2 days earlier, which was one of the low pressure zones that with a period of develop once a week or so in the northwestern North Pacific in winter. Instead of steady-state removal, if half of the radon removal occurred sporadically every 7 days, and the last removal took place two days before the observation, the transfer velocity would be 26 m day⁻¹. Our mean transfer velocity, which is less than 20% different from the steady state value including both overestimated and underestimated values, 9.4 ± 4.8 m day⁻¹, seems to represent the mean state of this region in winter. This suggests that the gas exchange fluxes under extremely rough conditions in the open ocean are larger than those estimated by using a transfer velocity equation with a linear or quadratic relationship with wind speed. This revised version was published online in July 2006 with corrections to the Cover Date.     

Aspherical correction for free vibration of elastically anisotropic solid by means of theXYZ algorithm

By applying the perturbation theory to theXYZ algorithm (a kind of variational method), the difference f in free vibration frequencies between sphere and ellipsoid was approximated as , where i and _i (i = x,y andz) (i=x, y andz) are aspherical coefficients and asphericities of the ellipsoid, respectively. We developed an analytic method to compute the aspherical coefficients719-4 by using theXYZ algorithm. A numerical example was given for an ellipsoidal olivine, and an attempt was made to estimate the asphericities of the specimen by a least-squares method, based on the relationship between frequency shift and asphericity.     

X-ray observation of the Jovian impacts of comet Shoemaker - Levy 9

An ASCA observation of the Jovian impact of the comet Shoemaker-Levy 9 is reported. Four impacts of H, L, Q1 and R were observed and four impacts of B, C, G, and Q2 were observed within 60 minutes after their impacts. No significant flaring of X-ray emission was observed. Upper limit X-ray fluxes of 90 % confidence level, averaged 5 minutes just after the impacts, were 2.4 × 10^–13 erg sec^–1 cm^–2, 3.5 × 10^–13 erg sec^–1 cm^–2, 1.6 × 10^–13 erg sec^–1 cm^–2 and 2.9 × 10^–13 erg sec^–1 cm^–2 for the impacts of H, L, Q1 and R, respectively, in the 0.5(0.7 for H and Q1)–10 keV energy range. However, a hint of X-ray enhancement around Jupiter from July 17 to July 19 was detected with about 2 6 × 10^–14 erg sec^–1 cm^–2 in the 0.5–10 keV energy range.