Relationships between mesoscale morphological units, stream hydraulics and Chinook salmon (Oncorhynchus tshawytscha) spawning habitat on the Lower Yuba River, California

An expert-based approach was used to identify 10 morphological unit types within a reach of the gravel bed, regulated Yuba River, California, that is heavily utilized by spawning Chinook salmon (Oncorhynchus tshawytscha). Analysis of these units was carried out using two-dimensional hydrodynamic modeling, field-based geomorphic assessment, and detailed spawning surveying. Differently classified morphological units tended to exhibit discrete hydraulic signatures. In most cases, the Froude number adequately differentiated morphological units, but joint depth–velocity distributions proved the most effective hydraulic classification approach. Spawning activity was statistically differentiated at the mesoscale of the morphological unit. Salmon preferred lateral bar, riffle, and riffle entrance units. These units had moderately high velocity (unit median > 0.45 m s^− 1) and low depth (unit median < 0.6 m), but each exhibited a unique joint depth–velocity distribution. A large proportion of redds (79%) were associated with conditions of convective flow acceleration at riffle and riffle entrance locations. In addition to reflecting microhabitat requirements of fish, it was proposed that the hydraulic segregation of preferred from avoided or tolerated morphological units was linked to the mutual association of specific hydraulic conditions with suitable caliber sediment that promotes the provision and maintenance of spawning habitat.