Preservation conditions and the use of sediment pigments as a tool for recent ecological reconstruction in four Northern European estuaries

Down-core sediment pigment concentrations from four Northern European estuaries were measured using high-performance liquid chromatography (HPLC) to investigate phytoplankton community structure and preservation conditions over the last ca. 100 years where all sites have experienced different levels of eutrophication. Phytoplankton pigments have been shown to be useful biomarkers for phytoplankton community structure and abundance due to their taxonomic specificity. The pigment concentrations and sediment pigment inventory showed large variation between the four sites. Concentrations ranged from more than 6000 nmol/g OC to less than 100 nmol/g OC and the inventory integrated over the top 10 cm from more than 300 nmol/cm² to less than 30 nmol/cm² for total identified pigments. Good pigment preservation in Mariager Fjord (Denmark) reflected the almost permanently anoxic conditions. Pigments in Laajalahti (Finland) showed peak concentrations around the time of highest nitrogen loading events known from historical and modelled records over the past 100 years. In contrast, poor down-core preservation of pigments (especially carotenoids) was observed in the Ems-Dollard (The Netherlands) and Himmerfjärden (Sweden) estuaries. The Ems-Dollard site is an intertidal mudflat that experiences daily exposure to light and air, which enhances pigment degradation. In Himmerfjärden, resuspension is an important process affecting both the sedimentation rate and degradation properties. The different preservation conditions at the four sites were supported by the differences in two degradation indicators; the ratio of pheopigment-a to chlorophyll-a and total carotenoids to total pigments. Class-specific carotenoid pigments represented the dominant algal groups reported from each site, however, no distinct down-core changes in the pigment composition were observed at any of the four sites. This indicated that changes in plankton community structure on the group level have been limited over this time period or masked by low preservation of pigments.     

Responses of phytoplankton and heterotrophic bacteria in the northwest subarctic Pacific to in situ iron fertilization as estimated by HPLC pigment analysis and flow cytometry

To verify the hypothesis that the growth of phytoplankton in the Western Subarctic Gyre (WSG), which is located in the northwest subarctic Pacific, is suppressed by low iron (Fe) availability, an in situ Fe fertilization experiment was carried out in the summer of 2001. Changes over time in the abundance and community structure of phytoplankton were examined inside and outside an Fe patch using phytoplankton pigment markers analyzed by high-performance liquid chromatography (HPLC) and flow cytometry (FCM). In addition, the abundance of heterotrophic bacteria was also investigated by FCM. The chlorophyll a concentration was initially ca. 0.9 μg l⁻¹ in the surface mixed layer where diatoms and chlorophyll b-containing green algae (prasinophytes and chlorophytes) were predominant in the chlorophyll biomass. After the iron enrichment, the chlorophyll a concentration increased up to 9.1 μg l⁻¹ in the upper 10 m inside the Fe patch on Day 13. At the same time, the concentration of fucoxanthin (a diatom marker) increased 45-fold in the Fe patch, and diatoms accounted for a maximum 69% of the chlorophyll biomass. This result was consistent with a microscopic observation showing that the diatom Chaetoceros debilis had bloomed inside the Fe patch. However, chlorophyllide a concentrations also increased in the Fe patch with time, and reached a maximum of 2.2 μg l⁻¹ at 5 m depth on Day 13, suggesting that a marked abundance of senescent algal cells existed at the end of the experiment. The concentration of peridinin (a dinoflagellate marker) also reached a maximum 24-fold, and dinoflagellates had contributed significantly (>15%) to the chlorophyll biomass inside the Fe patch by the end of the experiment. Concentrations of 19′-hexanoyloxyfucoxanthin (a prymnesiophyte marker), 19′-butanoyloxyfucoxanthin (a pelagophyte marker), and alloxanthin (a cryptophyte marker) were only incremented a few-fold increment inside the Fe patch. On the contrary, chlorophyll b concentration reduced to almost half of the initial level in the upper 10 m water column inside the Fe patch at the end of the experiment. A decrease with time in the abundance of eukaryotic ultraphytoplankton (<ca. 5 μm in size), in which chlorophyll b-containing green algae were possibly included was also observed by FCM. Overall, our results indicate that Fe supply can dramatically alter the abundance and community structure of phytoplankton in the WSG. On the other hand, cell density of heterotrophic bacteria inside the Fe patch was maximum at only ca. 1.5-fold higher than that outside the Fe patch. This indicates that heterotrophic bacteria abundance was little respondent to the Fe enrichment.     

Late Holocene changes in ultraviolet radiation penetration recorded in an East Antarctic lake

Late Holocene changes in the ultraviolet radiation (UVR) penetration in a lake in the Larsemann Hills (East Antarctica) were reconstructed using sediment core proxies based on fossil pigments (scytonemins and its derivatives) and siliceous microfossils. The influence of changes in lake depth on the UVR proxy was excluded by applying a correction, based on the non-linear relation between modern scytonemin concentrations and lake depth in a regional reference data set, and the record of past lake depths inferred using a diatom based transfer function in the sediment core. Results showed four well-defined maxima in the UVR proxy during the last 1600–1800 years, centred around 1820–1780, 1580–1490, 790–580 and 680–440 AD. Several mechanisms may account for these observed changes in UVR penetration, including past variability in cloud cover, atmospheric turbidity, ozone column depth, snow cover on the lake ice, DOM concentrations and lake-ice thickness and transparency resulting from temperature fluctuations. Although some gaps remain in our knowledge of scytonemin production in relation to the limnology of Antarctic lakes, the results highlight the importance and potential of the sediments in these highly transparent water bodies as archives of changes in past UVR receipt at the Earth’s surface.     

Phytoplankton composition and biomass across the southern Indian Ocean

Phytoplankton composition and biomass was investigated across the southern Indian Ocean. Phytoplankton composition was determined from pigment analysis with subsequent calculations of group contributions to total chlorophyll a (Chl a) using CHEMTAX and, in addition, by examination in the microscope. The different plankton communities detected reflected the different water masses along a transect from Cape Town, South Africa, to Broome, Australia. The first station was influenced by the Agulhas Current with a very deep mixed surface layer. Based on pigment analysis this station was dominated by haptophytes, pelagophytes, cyanobacteria, and prasinophytes. Sub-Antarctic waters of the Southern Ocean were encountered at the next station, where new nutrients were intruded to the surface layer and the total Chl a concentration reached high concentrations of 1.7 ??g Chl a L⁻¹ with increased proportions of diatoms and dinoflagellates. The third station was also influenced by Southern Ocean waters, but located in a transition area on the boundary to subtropical water. Prochlorophytes appeared in the samples and Chl a was low, i.e., 0.3 ??g L⁻¹ in the surface with prevalence of haptophytes, pelagophytes, and cyanobacteria. The next two stations were located in the subtropical gyre with little mixing and general oligotrophic conditions where prochlorophytes, haptophytes and pelagophytes dominated. The last two stations were located in tropical waters influenced by down-welling of the Leeuwin Current and particularly prochlorophytes dominated at these two stations, but also pelagophytes, haptophytes and cyanobacteria were abundant. Haptophytes Type 6 (sensuZapata et al., 2004), most likely Emiliania huxleyi, and pelagophytes were the dominating eucaryotes in the southern Indian Ocean. Prochlorophytes dominated in the subtrophic and oligotrophic eastern Indian Ocean where Chl a was low, i.e., 0.043-0.086 ??g total Chl a L⁻¹ in the surface, and up to 0.4 ??g Chl a L⁻¹ at deep Chl a maximum. From the pigment analyses it was found that the dinoflagellates of unknown trophy enumerated in the microscope at the oligotrophic stations were possibly heterotrophic or mixotrophic. Presence of zeaxanthin containing heterotrophic bacteria may have increased the abundance of cyanobacteria determined by CHEMTAX.     

Contrasting oceanographic conditions and phytoplankton communities on the east and west coasts of Australia

The composition and dynamics of the phytoplankton communities and hydrographic factors that control them are described for eastern and western Australia with a focus on the Eastern Australian Current (EAC) and Leeuwin Current (LC) between 27.5° and 34.5°S latitude. A total of 1685 samples collected from 1996 to 2010 and analysed for pigments by high performance liquid chromatography (HPLC) showed the average TChla (monovinyl+divinyl chlorophyll a) concentration on the west coast to be 0.28±0.16 ??g L⁻¹ while it was 0.58±1.4 ??g L⁻¹ on the east coast. Both coasts showed significant decreases in the proportions of picoplankton and relatively more nanoplankton and microplankton with increasing latitude. On both coasts the phytoplankton biomass (by SeaWiFS) increased with the onset of winter. At higher latitudes (>27.5°S) the southeast coast developed a spring bloom (September) when the mean monthly, surface chlorophyll a (chla) concentration (by SeaWiFS) was 48% greater than on the south west coast. In this southern region (27.5-34.5°S) Synechococcus was the dominant taxon with 60% of the total biomass in the southeast (SE) and 43% in the southwest (SW). Both the SE and SW regions had similar proportions of haptophytes; ∼14% of the phytoplankton community. The SW coast had relatively more pelagophytes, prasinophytes, cryptophytes, chlorophytes and less bacillariophytes and dinophytes. These differences in phytoplankton biomass and community composition reflect the differences in seasonality of the 2 major boundary currents, the influence this has on the vertical stability of the water column and the average availability of nutrients in the euphotic zone. Seasonal variation in mixed layer depth and upwelling on the west coast appears to be suppressed by the Leeuwin Current. The long-term depth averaged (0-100 m) nitrate concentration on the west coast was only 14% of the average concentration on the east coast. Redfield ratios for NO₃:SiO₂:PO₄ were 6.5:11.9:1 on the east coast and 2.2:16.2:1 on the west coast. Thus new production (nitrate based) on the west coast was likely to be substantially more limited than on the eastcoast. Short term (hourly) rates of vertical mixing were greater on the east coast. The more stable water column on the west coast produced deeper subsurface chlorophyll a maxima with a 25% greater proportion of picoeukaryotes.     

Algal pigment patterns and phytoplankton assemblages in different water masses of the Río de la Plata maritime front

The composition of phytoplankton assemblages were studied in three sections across the continental shelf between the Río de la Plata and the oceanic waters of the Subtropical Convergence, during late spring. Algal communities were examined using microscopy and HPLC-derived pigment concentrations. The CHEMTAX program was used to estimate the chlorophyll a (chl a) biomass of different algal classes. Trends in pigment ratios due to phytoplankton photo-adaptation and photo-acclimation were also examined. In order to accommodate the natural diversity of phytoplankton assemblages the original data have been split to represent five ecosystems. In addition, the pigment data for the Brazil Current ecosystem has been split by sample depth.     

Monsoon driven changes in phytoplankton populations in the eastern Arabian Sea as revealed by microscopy and HPLC pigment analysis

Like the rest of the Arabian Sea, the west coast of India is subject to semi-annual wind reversals associated with the monsoon cycle that result in two periods of elevated phytoplankton productivity, one during the northeast (NE) monsoon (November–February) and the other during the southwest (SW) monsoon (June–September). Although the seasonality of phytoplankton biomass in these coastal waters is well known, the abundance and composition of phytoplankton populations associated with this distinct and predictable seasonal cycle is poorly known. Here we present for the first time, the results of a study on the community structure of phytoplankton for this region, derived from HPLC pigment analysis and microscopic cell counts. Our sampling strategy allowed for large spatial and temporal coverage over regions representative of the coastal and offshore waters, and over seasons that included the NE and the SW monsoon. Monthly observations at a fixed coastal station in particular, allowed us to follow changes in phytoplankton community structure associated with the development of anoxia. Together these measurements helped establish a pattern of seasonal change of three major groups of phytoplankton: diatoms, dinoflagellates and cyanobacteria that appeared to be tightly coupled with hydrographic and chemical changes associated with the monsoonal cycle. During the SW monsoon when nitrate concentrations were high, diatoms were dominant but prymnesiophytes were present as well. By October, as nitrate fell to below detection levels and anoxic conditions began to develop on the shelf below the shallow pycnocline, both diatom and prymensiophytes declined sharply giving way to dinoflagellates. In the well oxygenated surface waters, where both nitrate and ammonium were below detection limits, pico-cyanobacterial populations became dominant.During the NE monsoon, a mixed diatom-dinoflagellate population was quickly replaced by blooms of Trichodesmium erythraeum and Noctiluca miliaris with higher amounts of zeaxanthin, β-carotene, Chl b and prasinoxanthin. Trichodesmium trichomes were noticed in the water column as early as December when nitrate concentrations became limiting. The low phytoplankton biomass and high ammonium concentrations argue that active grazing populations may be responsible for preventing diatom-dinoflagellate populations from establishing themselves to bloom proportions in the eastern Arabian Sea during the early NE monsoon. Trichodesmium continued its dominance well into May, when nutrient enrichment associated with its death and decay helped simulate the growth of both diatoms and dinoflagellates. Given that anoxic conditions are becoming more pervasive in the eastern Arabian Sea, our observations in particular, those of a shift towards dinoflagellate dominance during the development of anoxia assume particular importance.     

Organic biomarkers in the twilight zone—Time series and settling velocity sediment traps during MedFlux

The transfer of material through the twilight zone of the ocean is controlled by sinking particles that contain organic matter (OM) and mineral ballast. During the MedFlux field program in the northwestern Mediterranean Sea in 2003, sinking particulate matter was collected in time series (TS) and settling velocity (SV) traps and analyzed for amino acids, lipids, and pigments (along with ballast minerals) [Lee, C., Armstrong, R.A., Wakeham, S.G., Peterson, M.L., Miquel, J.C., Cochran, J.K., Fowler, S.W., Hirschberg, D., Beck, A. Xue, J., 2009b. Particulate matter fluxes in time series and settling velocity sediment traps in the northwestern Mediterranean Sea. Deep-Sea Research II, this volume [doi:10.1016/j.dsr2.2008.12.003]]. The goal was to identify how organic chemical compositions of sinking particles varied as a function of their in-situ settling velocity. The TS record was used to define the biogeochemical character and temporal pattern in flux during the period of SV trap deployment. Temporal variations in organic and mineral compositions are consistent with particle biogeochemistry being driven by the seasonal succession of phytoplankton. Spring diatom bloom conditions led to a high flux of rapidly sinking aggregates and zooplankton fecal matter; summer oligotrophy followed and was characterized by a higher proportion of slowly sinking phytoplankton cells. Bacterial degradation is particularly important during the low-flux summer period. Settling velocity traps show that a large proportion of particulate organic matter sinks at 200–500 m d⁻¹. Organic compositions of this fast-sinking material mirrors that of fecal pellets and aggregated material that sinks as the spring bloom terminates. More-slowly sinking OM bears a stronger signature of bacterial degradation than do the faster-sinking particles. The observation that compositions of SV-sorted fractions are different implies that the particle field is compositionally heterogeneous over a range of settling velocities. Thus physical and biological exchange between fast-sinking and slow-sinking particles as they pass down the water column must be incomplete.     

The changes of pigment contents and their environmental implications in the lake sediments of Ny-(A)lesund, Svalbard, the Arctic

According to palaeoclimatic and modern instrumental data, numerous studies have indicated that the Arctic climate has undergone a significant warming during the past 100 years, and this may lead to significant impact on the fragile lake ecosystem. In this study, we collected a lake sediment core from the Ny-(A)lesund of Svalbard and determined the concentrations of four pigments including chlorophyll derivatives, total carotenoids, oscillaxanthin and myxoxanthophyll in the sediments. Combined with other physical and chemical proxies such as calcium carbonate, total organic carbon, biogenic silicon etc., we have reconstructed the historical changes of lacustrine primary productivity in Ny-(A)lesund, especially for the past 100 years. The results showed that during the period of Little Ice Age (LIA), the climate was unfavorable for the growth of the lake algae, and thus the lacustrine productivity declined. This result was supported by the relatively low contents of pigment and biogenic silica in the sediments. In contrast, the contents of total organic carbon (TOC) and sediment pigments increased significantly in the upper 5 cm (~1890AD), reflecting the rapid growth of the lake algae, thus the great increase of lacustrine primary productivity, corresponding to the warming climate after LIA. However, the biogenic silica in the upper sediments still had a relatively low level, and this might be related to the growth competition with other algae species. Over the past 100 years, the ratio of Osc/Myx in the sediments decreased continuously, indicative of durative increase of myxoxanthophyll in blue-green algal pigments, and this might imply that the human activity had enhanced the nutrition level of the lake in the Arctic region.     

胶州湾口内海水中叶绿素浓度的周年变化和垂直分布

于１９８３年１１月－１９８５年１１月在胶州湾两个观测站逐月进行了２周年的海水中叶绿素浓度的定点研究。结果表明，（１）胶州湾口表层海水中的叶绿素α平均浓度为３．０５（１．０２－１５．６２）ｍｇ／ｍ＾３；真光层中平均为２６．３４（９．９７－１０６．５９）ｍｇ／ｍ＾２；其季节变化呈春（３－４月）、秋（９－１１月）双峰型。（２）小型（＜７８μｍ）的浮游植物平均占海水中叶绿素α的８５．７６％。（３）叶绿素ａ