建鲤基因组DNA的RAPD分析

用 1 5个随机引物对建鲤基因组DNA进行RAPD分析 ,结果显示 ,建鲤群体内的遗传相似系数为 0 91 81± 0 0 73 8,多态位点比例为 0 41 67,平均杂合度为 0 1 884。表明建鲤种质较纯 ,群体内的遗传变异程度较小。建鲤优良性状产生的分子学基础是等位基因的杂合程度较高     

Assessing the Germplasm of Laminaria （Phaeophyceae） with Random Amplified Polymorphic DNA （RAPD） Method

Eighteen gametophytes including L.japonica ,L.ochotensis and L.longissima,were verified with random amplified polymorphic DNA (RAPD) technique.Eighteen ten-base primers were chosen from 100 primers selected for final amplification test.Among the total of 205 bands amplified ,181(88.3%) were polymorphic ,The genetic distance among different strains ranged from 0.072 to 0.391,The dendrogram constructed by unweighted pair -group method with arithmetic(UPGMA) method showed that the female and male gamtophytes of the same cell lines could be grouped in pairs respectively,It indicated that RAPD analysis could be used not only to distin-gusih different strains of Laminariz ,but also to distinguish male and female gametophyte within the same cell lines,There is ambiguous systematic relationship if judged mereely by the present data It seems that the use of RAPD marker is limited to elucidstion of the phylogenetic relationship among the species of Laminaria.     

The comparison between allozyme and RAPD makers for the population genetic structure analysis of scallop Chlamys farreri

1INTRODUCTION Since the first use in human genetic research in1966,allozyme has become the most popular genetic marker for population genetics studies for almost all groups of animals and plants(Lewontin and Hubby,1966;Murphy et al.,1996).In the past seve…     

绒螯蟹种质资源研究进展

本文综述了近年来有关绒螯蟹属在形态学、遗传学和育种学方面的研究进展 ,着重介绍了同工酶、RAPD和 mt DNA技术在绒螯蟹群体遗传学中的应用 ,提出遗传学分类标准的建立是绒螯蟹属分子分类的关键所在。     

海桑属红树植物遗传多样性和引种关系研究

以海南东寨港红树林自然保护区内无瓣海桑(Sonneratia apetala)、海南海桑(S.hainanensis)、拟海桑(S.paracaseolaris)、杯萼海桑(S.abla)、大叶海桑(S.ovata)、海桑(S.caseolaris)等6种海桑属红树植物为材料,对15个有效引物进行RAPD分析,共扩增出512条带,其中多态性条带为297,占总扩增条带的58.01%.Nei指数法分析和UPGMA统计分析表明,6种海桑属红树植物分为A,B,C3个组,平均遗传距离为0.38.A组包括无瓣海桑、海南海桑、大叶海桑、怀萼海桑,其中无瓣海桑、海南海桑、大叶海桑处于同一个亚组.B组包括拟海桑.C组包括海桑.对海南和福建无瓣海桑种群进行RAPD分析.对Shannon表型多样性指数统计结果表明,福建种群为0.669,海南种群为0.671,各种群遗传变异较大,这与无瓣海桑种群广泛的适应性相一致.对种群间的Shannon表型多样性指数分析表明,种群内的遗传变异占整个遗传变异的93.3%,而种群间的遗传变异仅占6.7%.这表明无瓣海桑种群的大部分遗传变异存在于种群内,而种群间的遗传变异较小.由此可见,无瓣海桑基因组丰富的多样性,是使其由海南成功引种到福建的重要因素.     

翘嘴红鲌(Erythroculter ilishaeformis Bleeker)种群遗传多样性的RAPD分析

采用RAPD技术对翘嘴红鲌养殖群体进行了DNA多态性检测.共采用40个随机引物进行扩增,其中14个引物可获得清晰且重复性好的扩增图谱,共扩增出121个RAPD位点,具有多态现象的位点为40个,多态位点比例为33.06%.翘嘴红鲌群体的遗传相似系数为 0.8878-0.9600,平均为0.9201,遗传变异度为0.0799.Shannon多样性指数为10.8824,Shannon多样性值为0.0899.研究表明,翘嘴红鲌目前的种质资源状况令人堪忧,改变目前人工繁育模式,建立原种、良种场,丰富物种遗传多样性是资源保护的基础.     

利用RAPD和AFLP标记初步构建太平洋牡蛎的遗传连锁图谱

利用RAPD和AFLP标记 ,以一回交家系 [(Miyagi×Hiroshima)×Miyagi]为作图群体 ,构建了太平洋牡蛎的遗传连锁图谱。用经过筛选的 3 3个RAPD引物和 1 1个AFLP引物组合 ,对父母本和 80个子代个体进行了遗传分析。共得到母本分离标记 1 93个 ,其中 1 44个符合1∶1孟德尔分离规律。父本分离标记 1 5 6个 ,其中 1 1 1个符合 1∶1孟德尔分离规律。雌性框架图包括 99个遗传标记 ,定位在 1 2个连锁群中 ,覆盖 985 2cM ,标记间平均间隔 1 1 3cM。另外有 3个三联体 ,7个连锁对 ,图谱共覆盖 1 1 6 5 7cM。雄性框架图包括 72个遗传标记 ,分布在 8个连锁群 ,覆盖 81 1cM ,标记间平均间隔 1 2 7cM。另外有 4个三联体 ,3个连锁对 ,图谱共覆盖93 1 8cM。     

Application of the first internal transcribed spacer(ITS-1) of ribosomal DNA as a molecular marker to population analysis in farrer''s scallop Chlamys farreri

Sequence variation of the first internal transcribed spacer of ribosomal DNA （ ITS - 1 ） was examined and its application to the study of genetic variation was explored in four populations of farter＇ s scallop Chlamys farreri. ITS - 1 fragments, with a length of about 300 bp,of 78 individuals collected from Dalian, Qingdao, Yantai in China and Korea respectively were amplified via PCR, cloned and sequenced. Intra-genomic variation was examined by sequencing several clones of single individuals. Alignment and polymorphism analysis detected 44 haplotypes and 50 polymorphic sites which consist of 30 substitutions and 20 indels, indicating a high level of polymorphisms. Sequence analysis also showed a very low level of intra-individual variation. All these features validated the feasibility of application of ITS - 1 fragment to population analysis. Polymorphism analysis showed that the Korea sample has the richest genetic variation, followed by Yantai and Qingdao samples. AMOVA （analysis of molecular variance） showed that the majority （96.26%） of genetic variation was distributed within populations and 3.74% resulted from among populations, but with P 〈 0.05 （ = 0.042）, indicating that the populations in this study have significant divergence. This output was basically concordant with the result arising from RAPD data and different from that from mitochondrial 16S rDNA sequence data. Discussion on this inconsistency was made accordingly.     

广西地区文蛤的遗传多样性研究

以随机扩增多态性DNA（RAPD）研究广西的山口、北海、犀牛角、东兴的文蛤种群的遗传多样性。结果表明，在筛选的60个引物中，23个呈阳性反应，其中10个引物可产生105条稳定、清晰的带。山口、北海、犀牛角、东兴的文蛤种群的遗传多样性指数分别为0.1995,0.2039，0.1773,0.1936；多态位点比例分别为86.32%，90.63%,81.05%,88.00%,4个种群间的遗传距离在0.050～0.070之间，相邻种群的遗传差距较小。除犀牛角种群以外，其它3个种群的遗传变异水平较高。     

栉孔扇贝(Chlamys farreri)自然群体遗传多样性的RAPD分析

利用RAPD技术对栉孔扇贝(Chlamysfarreri)的四个自然群体(大连、烟台、青岛、韩国)的遗传多样性进行了分析。12个随机引物在四个群体中共检测到123个位点,其中多态位点109个,多态位点比例为88.62%;四个群体中均未检测到各群体特有的扩增带。韩国、烟台、大连、青岛四个群体的遗传多样性指数(Shannon指数)分别为0.2557、0.2557、0.2344和0.2249,以韩国和烟台群体遗传多样性较高,其次为大连群体,青岛群体最低,但它们之间无明显差异。不同群体的遗传多样性指数的平均数Hpop为0.2427,整个栉孔扇贝自然群体的遗传多样性指数Hsp为0.2503。遗传多样性剖分显示,绝大多数(97%)的遗传多样性是由群体内不同个体间的差异造成的,只有很小部分(3%)的遗传多样性与群体间的遗传分化有关。而采用基于单倍型(等位基因)之间的进化距离的AMOVA分析得到的这两个数据则分别为99%和1%,Φ值为0.010,且P=0.05,表明群体间遗传分化明显程度位于临界值。