大型多元统计软件PRIMER的方法原理及其在底栖群落生态学中的应用

本文阐述大型多元统计分析软件 PRIMER的原理及其在底栖生态学中的应用。PRIMER是处理生态和环境多元数据的重要数值分析工具 ,本文从实用的角度对其中包括的技术方法和相应的子程序如 :等级聚类 (CLUSTER)、非度量多维标度 (MDS)、主分量分析 (PCA)、相似性分析检验(ANOSIM)、相似性百分比分析 (SIMPER)、生物 -环境连接的逐步分析和相关检验 (BIOENV/BVSTEP)等作了较为系统的介绍。     

Benthic meiofauna community composition at polluted and non-polluted sites in New Zealand intertidal environments

Meiofauna composition was investigated for six field sites, including polluted and non-polluted sites, within two regions (Auckland and Bay of Plenty) during winter (July-August 2004) in the North Island of New Zealand. Physico-chemical parameters were measured during the sampling period and meiofauna distribution and abundance were compared with these measured parameters. Analysis of meiofauna abundance indicated that foraminiferans, nematodes and ostracods were the taxa that contributed to the variability between field sites within the Auckland region. However, no clear taxa dominance was seen in the Bay of Plenty region. Comparison of meiofauna abundance and physico-chemical parameters was done using multivariate analysis (PRIMER). However, no clear relationships between the parameters were observed in any field site in either region. The Shannon-Weiner index of diversity did not show any clear differentiation between polluted and non-polluted field sites. Therefore, from the present study, the taxa or physico-chemical parameters used could not effectively characterise pollution at the investigated field sites.     

Macrobenthos of Kakinada Bay in the Godavari delta, East coast of India: comparing decadal changes

A one-year study (1995–1996) on the macrobenthos over a spread of (37) hydrographically differing GPS-fixed sites in Kakinada Bay (mean salinity 27.16±0.4) and adjacent mangrove channels (14.78±0.55) in the Godavari delta, one of India's largest estuarine systems, revealed a great preponderance of benthic life. There were 11 diverse taxa represented by 95 species collected through several (303) grab and dredge hauls. Based on Bray-Curtis similarity through hierarchical clustering implemented in PRIMER, it was possible to distinguish the benthos into four assemblages each of which represented sites in the Central and North bay (Paphia textrix – Typhlocarcinus sp. Assemblage), South-East bay (Protankyra similis – Paphia malabarica Assemblage), Mangrove Outlets (Cerithidea cingulata Assemblage) and Mangrove channels (Diopatra neapolitana Assemblage). Benthos densities (mean nos. dredge haul⁻¹) were highest (299 individuals) at sites close to mangrove outlets. Species diversity (Margalef, d; Shannon-Wiener, H′) was low in general (d 1.244 to 2.251 and H′ 0.038 to 1.502). Sediments were mostly clayey-silt in nature except in southeast bay where they are silt-sand. Organic matter (mean) was at or near 1.3%. The observations have revealed marked changes in benthic community structure relative to an earlier investigation held in 1958–1963 in this area. Over the years, species such as Turritella duplicata, Tonna dolium and Placuna placenta found in considerable numbers previously have dwindled. Anomia, Bursa and Atrina and echinoderms, Astropecten indica, Echinodiscus auritus and Temnopleurus toreumaticus and the brachiopod, Lingula sp. of common occurrence in early 60s are absent altogether attributable to long-term natural trends during the intervening years and/or events accompanying human impingement (e.g. industrial and urban growth, port expansion measures, aquaculture, mangrove denudation etc.). Despite such large-scale alterations in benthos community structure, there were no significant changes in “biodiversity” measured through Average Taxonomic Distinctness (AvTD) and Variation in Taxonomic Distinctness (VarTD). The investigation revealed that AvTD (Δ⁺) and VarTD (Λ⁺) for previous years and the present study remained well within the 95% confidence funnel implying taxonomic stability. It was found that species, which had replaced the earlier forms, were drawn from comparable (Linnean) hierarchy i.e. same phylum/class.     

应用PRIMER软件进行浮游植物群落结构的多元统计分析

根据青岛近海进行的一次添加营养盐的围隔实验数据,采用专业软件PRIMER中的多元统计分析方法,进行了浮游植物群落结构的变化研究。结果表明,虽然由于本实验中浮游植物的生长受到Si的限制,硅藻类群不占明显的优势,使得优势种随时间的变化不明显,没有出现明显的群落演替,但用PRIMER软件的聚类分析(Clustering)和多维尺度转换排序(MDS)分析表明,添加营养盐后浮游植物群落结构有较明显的变化,同时,PRIMER软件的相异系数(ANOSIM)分析也表明,在同时添加N、P的围隔内,浮游植物群落结构变化较只添加P的围隔中的变化显著。这显示了PRIMER软件在分析浮游植物群落结构变化和评价水域富营养化中的应用前景。     

Enhancement of the benthic communities around an isolated island in the Antarctic Ocean

Insular marine biotas are often richer in faunal diversity than those from the open sea in the same geographical region. The existence of particular island effects were tested under polar conditions by comparing infaunal benthic assemblages on Peter I Island with those of similar latitudes in the open ocean at the Bellingshausen Sea and also from the coast of the Antarctic Peninsula. Sampling was carried out aboard the R/V Hespérides during the expedition named BENTART-2003 from 24 January to 3 March 2003. Benthic samples were collected at 18 stations ranging from 90 to 2 044 m depth, using an USNEL-type box corer (BC) dredge. Representatives of 32 higher taxa of invertebrates were found. Univariate and multivariate analyses revealed various patterns in the data. First, significant differences in polychaete abundance were detected between the stations located in the open sea and the remaining sites (island plus mainland sites). Bivalve abundances were also distinct between island and mainland sampling sites. Sediment columns taken from the island seafloor exhibited the highest rate of bioturbation by the infauna. These findings confirm the model that islands develop distinct assemblages characterized by the enhancement of the benthic communities even in cold waters. Several abiotic factors were measured simultaneously at the seafloor and along the water column to investigate faunal distribution patterns. Significant correlations were found between the benthic assemblages and a combination of two environmental variables: "island effect" (measured as a categorical variable) and the redox state of sediments. Richer and more complex benthic assemblages were found in Peter I Island’s sea bottom, whereas the more depauperate bottoms remained in the open sea.