利用RAPD和AFLP标记初步构建太平洋牡蛎的遗传连锁图谱

利用RAPD和AFLP标记 ,以一回交家系 [(Miyagi×Hiroshima)×Miyagi]为作图群体 ,构建了太平洋牡蛎的遗传连锁图谱。用经过筛选的 3 3个RAPD引物和 1 1个AFLP引物组合 ,对父母本和 80个子代个体进行了遗传分析。共得到母本分离标记 1 93个 ,其中 1 44个符合1∶1孟德尔分离规律。父本分离标记 1 5 6个 ,其中 1 1 1个符合 1∶1孟德尔分离规律。雌性框架图包括 99个遗传标记 ,定位在 1 2个连锁群中 ,覆盖 985 2cM ,标记间平均间隔 1 1 3cM。另外有 3个三联体 ,7个连锁对 ,图谱共覆盖 1 1 6 5 7cM。雄性框架图包括 72个遗传标记 ,分布在 8个连锁群 ,覆盖 81 1cM ,标记间平均间隔 1 2 7cM。另外有 4个三联体 ,3个连锁对 ,图谱共覆盖93 1 8cM。     

Application of the first internal transcribed spacer(ITS-1) of ribosomal DNA as a molecular marker to population analysis in farrer''s scallop Chlamys farreri

Sequence variation of the first internal transcribed spacer of ribosomal DNA （ ITS - 1 ） was examined and its application to the study of genetic variation was explored in four populations of farter＇ s scallop Chlamys farreri. ITS - 1 fragments, with a length of about 300 bp,of 78 individuals collected from Dalian, Qingdao, Yantai in China and Korea respectively were amplified via PCR, cloned and sequenced. Intra-genomic variation was examined by sequencing several clones of single individuals. Alignment and polymorphism analysis detected 44 haplotypes and 50 polymorphic sites which consist of 30 substitutions and 20 indels, indicating a high level of polymorphisms. Sequence analysis also showed a very low level of intra-individual variation. All these features validated the feasibility of application of ITS - 1 fragment to population analysis. Polymorphism analysis showed that the Korea sample has the richest genetic variation, followed by Yantai and Qingdao samples. AMOVA （analysis of molecular variance） showed that the majority （96.26%） of genetic variation was distributed within populations and 3.74% resulted from among populations, but with P 〈 0.05 （ = 0.042）, indicating that the populations in this study have significant divergence. This output was basically concordant with the result arising from RAPD data and different from that from mitochondrial 16S rDNA sequence data. Discussion on this inconsistency was made accordingly.     

基于MAPGIS的军事标图系统的设计

军事领域是一个非常特殊的行业，信息的安全性和空间数据的多样性是应用开发的重要问题。在全球信息化日趋高速发展和逐步成熟的今天，军队信息化建设也必须与GIS技术紧密结合，跟上时代前进的步伐。较系统地研究了GIS技术在军事标图绘制中的应用和集成问题，并提供了相应的理论方法和实现系统。在此基础上介绍了以MAPGIS为开发平台的军事标绘系统的实用功能和特点。首先分析了军事信息系统对地理信息数据的要求，并且评述了相关领域的研究现状。然后较为系统地介绍了军事标图系统的总体设计，根据军事标绘对象的数据特征，设计符合要求的应用系统提出了面向对象和无缝交互工具等的设计思想。对军标对象数据模型和操作模型进行了详细地阐述和说明，并将这些模型在系统中进行了实现。最后介绍了军事标图系统的主要模块和功能，探讨了今后GIS研究和发展的方向。     

Deformation patterns of upper Quaternary strata and their relation to active tectonics,Po Basin,Italy

Despite increased application of subsurface datasets below the limits of seismic resolution, reconstructing near‐surface deformation of shallow key stratigraphic markers beneath modern alluvial and coastal plains through sediment core analysis has received little attention. Highly resolved stratigraphy of Upper Pleistocene to Holocene (Marine Isotope Stage 5e to Marine Isotope Stage 1) alluvial, deltaic and coastal depositional systems across the southern Po Plain, down to 150 m depth, provides an unambiguous documentation on the deformation of previously flat‐lying strata that goes back in time beyond the limits of morphological, historical and palaeoseismic records. Five prominent key horizons, accurately selected on the basis of their sedimentological characteristics and typified for their fossil content, were used as highly effective stratigraphic markers (M1 to M5) that can be tracked for tens of kilometres across the basin. A facies‐controlled approach tied to a robust chronology (102 radiocarbon dates) reveals considerable deformation of laterally extensive nearshore (M1), continental (M2 and M3) and lagoon (M4 and M5) marker beds originally deposited in a horizontal position (M1, M4 and M5). The areas where antiformal geometries are best observed are remarkably coincident with the axes of buried ramp anticlines, across which new seismic images reveal substantially warped stratal geometries of Lower Pleistocene strata. The striking spatial coincidence of fold crests with the epicentres of historic and instrumental seismicity suggests that deformation of marker beds M1 to M5 might reflect, in part at least, syntectonically generated relief and, thus, active tectonism. Precise identification and lateral tracing of chronologically constrained stratigraphic markers in the ¹⁴C time window through combined sedimentological and palaeoecological data may delineate late Quaternary subsurface stratigraphic architecture at an unprecedented level of detail, outlining cryptic stratal geometries at the sub‐seismic scale. This approach is highly reproducible in tectonically active Quaternary depositional systems and can help to assess patterns of active deformation in the subsurface of modern alluvial and coastal plains worldwide.     

鄂尔多斯盆地前寒武纪末期古地貌恢复及其对烃源岩的控制作用

鄂尔多斯盆地前寒武纪末期古地貌控制着后期沉积体系的空间配置与古地理展布。通过野外剖面、岩芯分析、测井数据等建立鄂尔多斯盆地寒武系层序地层格架;选取寒武纪SS1最大海泛面(徐庄组沉积晚期地层)为标志层,通过残余厚度印模法,并结合古地质图分析,对研究区前寒武纪进行古地貌恢复,明确了前寒武纪沉积背景、构造格局及物源方向。总体上,前寒武纪鄂尔多斯盆地南、北濒临秦祁海和兴蒙海,东、西被贺兰和晋豫陕坳拉槽所夹持,古地貌东北高、西南低,受秦祁海影响最大,可将其划分为3个古构造地貌单元:高地剥蚀区、受古构造控制形成的坳陷区以及处于剥蚀与沉积过渡地带的斜坡阶地区。通过研究前寒武纪末期古地貌与寒武纪早期烃源岩分布认为,拉张活动背景下的坳陷带以及斜坡带是鄂尔多斯盆地寒武纪早期烃源岩发育的有利区块,前寒武纪古地貌格局影响了寒武纪早期烃源岩发育与分布。恢复古地貌形态对于揭示物源供给,研究沉积物搬运、平面和纵向展布特征,探究沉积、沉降中心的迁移规律,以及进一步揭示生储盖组合和分布具有重大意义。     

皱纹盘鲍中国群体和日本群体的自交与杂交F1 的RAPD 标记

利用皱纹盘鲍中国群体和日本群体野生个体的单自交和单正反杂交获得了 4个F1家系 ,其中家系AJC、BCC、CCJ、DJJ分别为日本♀×中国♂、中国♀×中国♂、中国♀×日本♂和日本♀×日本♂组合 ,采用 2 2个引物对上述四个家系及其各自亲本个体的遗传结构进行了RAPD分析。结果表明 ,四个家系的平均杂合度 :AJC为 0 .2 32 9,BCC为 0 .1 667,CCJ为 0 .1 773,DJJ为 0 .1 649;各家系两亲本间遗传距离 :AJC为 0 .2 4 62 ,BCC为 0 .1 70 1 ,CCJ为 0 .2 1 0 9,DJJ为 0 .1 688。各家系子代群体与父母本的遗传距离 :AJC为 0 .1 772和 0 .2 2 2 4 ,BCC为 0 .1 1 81和 0 .1 92 0 ,CCJ为0 .1 1 2 3和 0 .1 691 ,DJJ为 0 .0 694和 0 .1 947。各家系子代个体间的遗传距离AJC为 0 .0 976,BCC为0 .0 95 1 ,CCJ为 0 .0 699,DJJ为 0 .0 682 ,而子代各群体间遗传距离均小于 0 .0 2 2 0。     

大黄鱼(Pseudosciaena crocea)养殖群体遗传多样性的降低

采用AFLP技术方法,对福建二个野生及二个养殖大黄鱼群体进行了遗传多样性的研究.实验采用7对引物组合,在四个群体的120个个体中共扩增出472个位点,其中多态位点为220个,多态位点比例为46.61%.结果表明,大黄鱼养殖群体的遗传多样性降低:宁德野生群体和湄州野生群体多态位点比例分别为42.42%和45.14%,Nei遗传多样性指数分别为0.1046和0.1245,shannon多样性指数分别为0.1659和0.1942,平均有效等位基因数(Ne)分别为1.4153和1.4428;宁德养殖群体和连江养殖群体多态位点比例分别为40.83%和40.53%,Nei遗传多样性指数分别为0.1027和0.1039,shannon多样性指数分别为0.1615和0.1633,平均有效等位基因数(Ne)分别为1.3919和1.3856.四个群体间遗传距离为0.0359-0.1465,平均为0.079,群体间基因流为1.0808.     

黄颡鱼(Pelteobagrus eupogon)不同生态地理分布群体遗传多样性的微卫星分析

利用40个黄颡鱼微卫星分子标记对吉林省月亮湖野生黄颡鱼(YL,30尾)、四川野生黄颡鱼(SC,30尾)、黑龙江省哈尔滨市松花江段黄颡鱼(SH,18尾)、湖北省荆州市长湖野生黄颡鱼子代(YY,30尾)及其亲本(QQ,30尾)、天津市换新国家级原良种场黄颡鱼1号(TJ,30尾)6个黄颡鱼群体的观测杂合度(Ho)、期望杂合度(He)、多态信息含量(PIC)和有效等位基因数(Ae)等进行了遗传检测,根据基因频率计算遗传相似系数和Nei氏标准遗传距离,x2检验估计Hardy-weinberg平衡,采用近交系数(FST)和基因流(Nm)分析群体的遗传分化及其来源.同时,使用PHYLIP3.63软件绘制基于Nei氏标准遗传距离的UPGMA进化树.6个群体共检测到5042个扩增片段,长度在150-650bp,40个基因座扩增出等位基因数从1-8个不等,共计143个等位基因,平均每个基因座扩增得到3.575个等位基因.结果显示:(1)6个黄颡鱼群体的多态性指标均适中,PIC在0.00-0.79之间,平均值为0.40、0.37、0.35、0.39、0.35和0.19,有效等位基因数(Ae)1.00-5.44个不等,平均有效等位基因数依次为2.05、2.30、1.93、2.07、1.93和1.47,无偏期望杂合度(He)在0.00-0.83之间,平均值为0.45、0.46、0.36、0.46、0.41和0.23;(2)遗传相似系数YY与QQ遗传相似度最高(0.9947),TJ与SC遗传相似系数最低(0.4846),聚类结果与地理分布呈一定相关性.     

AFLP analysis revealed differences in genetic diversity of four natural populations of Manila clam(Ruditapes philippinarum) in China

1 IntroductionManila clam (Ruditapes philippinarum) is aworldwide distributed species. In China, it is foundfrom the northern to southern seashores (Wang etal., 1993; Zhuang, 2001). This species is eura-line with the salinity tolerance ranging from 20 to4…     

洞庭湖水系五强溪水库光泽黄颡鱼(Pelteobagrus nitidus)遗传多样性的AFLP分析

为了了解沅水五强溪大坝阻隔对光泽黄颡鱼可能造成的遗传多样性影响,采用AFLP分子标记技术,对沅水五强溪水库库区和沅水下游两个光泽黄颡鱼野生群体进行了遗传多样性分析。9对选择性引物在两个光泽黄颡鱼群体中,共扩增出1243个位点,多态位点1091个,多态位点比率为87.77%。其中库区和沅水下游群体多态位点比率分别为85.41%、83.25%,观测等位基因数分别为1.854±0.592、1.803±0.622,有效等位基因数分别为1.597±0.381、1.574±0.377,Nei’s多样性指数分别为0.220±0.211、0.207±0.195,Shannon’s信息指数分别为0.330±0.305、0.302±0.338;两个群体内的平均遗传距离分别为0.124±0.072、0.119±0.057,群体间的平均遗传距离为0.127±0.100。两个群体的遗传参数比较不存在显著差异(P0.05)。聚类分析显示,UPGMA系统树没有依据群体而形成明显的两大分支。以上结果表明,五强溪水库库区和沅水下游两个光泽黄颡鱼群体的遗传多样性丰富,光泽黄颡鱼种群遗传结构对水库大坝阻隔的响应不明显。