Oceanographic influences on seabirds and cetaceans of the eastern tropical Pacific: A review

This paper is part of a comprehensive review of the oceanography of the eastern tropical Pacific, the oceanic region centered on the eastern Pacific warm pool, but also including the equatorial cold tongue and equatorial current system, and summarizes what is known about oceanographic influences on seabirds and cetaceans there. The eastern tropical Pacific supports on the order of 50 species of seabirds and 30 species of cetaceans as regular residents; these include four endemic species, the world’s largest populations for several others, three endemic sub-species, and a multi-species community that is relatively unique to this ecosystem. Three of the meso-scale physical features of the region are particularly significant to seabirds and cetaceans: the Costa Rica Dome for blue whales and short-beaked common dolphins, the Equatorial Front for planktivorous seabirds, and the countercurrent thermocline ridge for flocking seabirds that associate with mixed-species schools of spotted and spinner dolphins and yellowfin tuna. A few qualitative studies of meso- to macro-scale distribution patterns have indicated that some seabirds and cetaceans have species-specific preferences for surface currents. More common are associations with distinct water masses; these relationships have been quantified for a number of species using several different analytical methods. The mechanisms underlying tropical species–habitat relationships are not well understood, in contrast to a number of higher-latitude systems. This may be due to the fact that physical variables have been used as proxies for prey abundance and distribution in species–habitat research in the eastern tropical Pacific.Though seasonal and interannual patterns tend to be complex, species–habitat relationships appear to remain relatively stable over time, and distribution patterns co-vary with patterns of preferred habitat for a number of species. The interactions between seasonal and interannual variation in oceanographic conditions with seasonal patterns in the biology of seabirds and cetaceans may account for some of the complexity in species–habitat relationship patterns.Little work has been done to investigate effects of El Niño-Southern Oscillation cycles on cetaceans, and results of the few studies focusing on oceanic seabirds are complex and not easy to interpret. Although much has been made of the detrimental effects of El Niño events on apex predators, more research is needed to understand the magnitude, and even direction, of these effects on seabirds and cetaceans in space and time.     

Rare species, habitat diversity and functional redundancy in marine benthos

Macro-ecological theories relating species richness, abundance, range size, biological traits and environmental tolerance have rarely been tested in marine soft-sediments, despite the spatial extent of these habitats and the inherent richness of resident communities. This study examines the contribution of rare species to marine soft-sediment communities from New Zealand, focussing on the relationships of range size with abundance, environment, habitat diversity and life history traits. 54% of the 351 species sampled exhibited restricted ranges (found at ≤ 2 sites). In contrast to many terrestrial systems, we observed only a weak positive relationship between abundance and frequency of occurrence. Restricted-range species were not randomly distributed, with their distribution related to habitat characteristics, suggesting an important link between habitat diversity and rarity. They exhibited a similar range of traits to the total observed species pool, suggesting that they are not only important to biodiversity but could play a role in stability. Restricted range species were generally not small and this, together with the number of different biological traits represented, suggests that rare species are important to the functioning of marine systems. Thus, our results highlight the importance of considering rare species in habitat-based approaches to conservation.     

Nest microhabitat selection in larks from a European semi-arid shrub-steppe: the role of sunlight and predation

We analysed nest site selection in two shrub-steppe larks, the lesser short-toed larkCalandrella rufescensand the Thekla larkGalerida theklae. Both species nest on the ground next to a bush preferably facing north or north-east. Nestling growth and fledging weight are greater when the nest faces these directions. Both species prefer to nest next to camephytes with little foliage, and the lesser short-toed lark chooses sites with high visibility. We conclude that sunlight and nest predation are fundamental selective pressures determining nest microhabitat selection in larks in semi-arid areas.     

Ecosystem services assessment and compensation costs for installing seaweed farms

In a global context of promotion and expansion of blue growth initiatives, the development of activities such as aquaculture calls for the assessment of the potential impacts on biodiversity at different levels and associated services. This paper presents an assessment of the potential impact of the installation of seaweed farms on ecosystem services and the induced compensation costs. Biophysical and socioeconomic indicators have been developed for helping decision makers to select the most suitable locations. The approach considers a multi-criteria approach based on Geographical Information Systems (GIS) and Habitat Equivalency Analysis (HEA). The former is used to obtain biophysical ecosystem services and socioeconomic indicators and the latter to evaluate the costs required to compensate the loss of cultural and provisioning ecosystem services. A case-study in the Normand-Breton (Saint Malo) Gulf, France, illustrates this method through the analysis of hypothetical locations of seaweed farms. Results highlight the differences between alternative locations regarding biophysical constraints (in terms of distance and depth), potential risks of conflicts with existing uses, impacts on habitats and the ecosystem services delivered, and compensation costs. This case-study illustrates the flexibility of this approach which can be further adapted to include other indicators in order to deliver integrated information to coastal planners.     

Habitat continuity effects on gradients of fish biomass across marine protected area boundaries

Marine protected areas (MPAs) could be useful as fisheries management tools for the exportation of pelagic eggs, larvae and adult fish. A decreasing gradient of fish biomass across MPAs boundary may indicate export. We determine whether gradients of decreasing biomass of fish assemblage occurred in Tabarca Marine Reserve over two habitats with different continuity across the boundaries, to test if the patchy nature of the marine environment might act as a barrier for the fish export. In general, significant decreasing gradients in total fish biomass and biomass of some species were observed on P. oceanica and rocky substrates, independently of their different continuity through the reserve boundaries. Changes in the multivariate structure of the fish assemblage were correlated with the distance from integral reserve. All of these results support the hypothesis that the exportation of adult fish from Tabarca Marine Reserve occurs, and this process may influence the surrounding fished areas.     

Testing taxonomic resolution,data transformation and selection of species for monitoring macroalgae communities

The Water Framework and Habitats Directives require the evaluation of both the conservation and ecological status of macroalgae communities at water body or habitat level. However, assessments of macroalgal communities are highly time-consuming, both in terms of sampling effort and laboratory processing. These constraints have brought about their oversight in many marine monitoring programs, especially in subtidal environments. By using data from intertidal and subtidal macroalgae assemblages of Mouro Island (North coast of Spain) we wanted to identify possible cost-effective methods for monitoring this biological indicator, based on both high taxa levels and use of representative taxa. Multivariate analyses were applied using different data transformations. The results show that macroalgal communities are robust to aggregation to genus or even family level. Moreover, the outcomes show that transformation types introduce higher variation in the multivariate pattern of samples than the taxonomic level to which organisms are identified. Also, the study supports the use of representative taxa as a surrogate to overall community structure. Therefore, we conclude that a rapid-assessment by means of field evaluations, based on coverage of representative taxa, is a reliable alternative for the assessment of macroalgae status. In addition this procedure allows evaluation at a broader spatial scale (water body or habitat level) than traditional quantitative sampling procedure does.     

Predicting suitable habitat for the cold-water coral Lophelia pertusa (Scleractinia)

Ecological-niche factor analysis (ENFA) was applied to the reef framework-forming cold-water coral Lophelia pertusa. The environmental tolerances of this species were assessed using readily available oceanographic data, including physical, chemical, and biological variables. L. pertusa was found at mean depths of 468 and 480 m on the regional and global scales and occupied a niche that included higher than average current speed and productivity, supporting the theory that their limited food supply is locally enhanced by currents. Most records occurred in areas with a salinity of 35, mean temperatures of 6.2–6.7  °C and dissolved oxygen levels of 6.0–6.2 ml l⁻¹. The majority of records were found in areas that were saturated with aragonite but had low concentration of nutrients (silicate, phosphate, and nitrate). Suitable habitat for L. pertusa was predicted using ENFA on a global and a regional scale that incorporated the north-east Atlantic Ocean. Regional prediction was reliable due to numerous presence points throughout the area, whereas global prediction was less reliable due to the paucity of presence data outside of the north-east Atlantic. However, the species niche was supported at each spatial scale. Predicted maps at the global scale reinforced the general consensus that the North Atlantic Ocean is a key region in the worldwide distribution of L. pertusa. Predictive modelling is an approach that can be applied to cold-water coral species to locate areas of suitable habitat for further study. It may also prove a useful tool to assist spatial planning of offshore marine protected areas. However, issues with eco-geographical datasets, including their coarse resolution and limited geographical coverage, currently restrict the scope of this approach.     

Positive feedback fishery: Population consequences of ‘crab-tiling’ on the green crab Carcinus maenas

Collection of marine invertebrates for use as fishing bait is a substantial activity in many parts of the world, often with unknown ecological consequences. As new fisheries develop, it is critical for environmental managers to have high quality ecological information regarding the potential impacts, in order to develop sound management strategies. Crab-tiling is a largely unregulated and un-researched fishery, which operates commercially in the south-west UK. The target species is the green crab Carcinus maenas. Those crabs which are pre-ecdysis and have a carapace width greater than 40 mm are collected to be sold to recreational anglers as bait. Collection involves laying artificial structures on intertidal sandflats and mudflats in estuaries. Crabs use these structures as refugia and are collected during low tide. However, the effect that this fishery has on populations of C. maenas is not known. The impact of crab-tiling on C. maenas population structure was determined by sampling crabs from tiled estuaries and non-tiled estuaries using baited drop-nets. A spatially and temporarily replicated, balanced design was used to compare crab abundance, sizes and sex ratios between estuaries. Typically, fisheries are associated with a reduction in the abundance of the target species. Crab-tiling, however, significantly increased C. maenas abundance. This was thought to be a result of the extra habitat in tiled estuaries, which probably provides protection from natural predators, such as birds and fish. Although crabs were more abundant in tiled estuaries than non-tiled estuaries, the overall percentage of reproductively active crabs in non-tiled estuaries was greater than in tiled estuaries. As with most exploited fisheries stocks, crabs in exploited (tiled) estuaries tended to be smaller, with a modal carapace width of 20–29 mm rather than 30–39 mm in non-tiled estuaries. The sex ratio of crabs however; was not significantly different between tiled and non-tiled estuaries. These results illustrate the potential to manage fished populations using habitat provision to mitigate the effects of fishing pressure.     

Private rights,public benefits: Industry-driven seabed protection

New Zealand has a large exclusive economic zone (EEZ) that contains a variety of marine habitats and commercially-important species. The commercial fishing industry operating within New Zealand's EEZ is of significant value to the economy and fisheries resources are managed through the extensive use of Individual Transferable Quotas (ITQs). One of the benefits of ITQs has been to better align some of the private incentives of quota owners with the public interest. These incentives contributed to an initiative proposed by the fishing industry to close large areas of New Zealand's EEZ to protect the seabed from trawling. These closed areas are termed benthic protection areas (BPAs) and protect the benthic biodiversity of about 1.1 million square kilometres of seabed—approximately 30% of New Zealand's EEZ. A significant proportion of New Zealand's known seamounts and active hydrothermal vents are protected by these closed areas. We describe and discuss the criteria used to select BPAs and some of the criticism of this marine protection initiative. We argue that the assignment of strong property rights in fishing resources was an important precondition to an industry initiative that has a significant public benefit. Where private and public interests are well aligned, government can adopt an enabling and facilitation role, ceding direct control of processes in order to get the results the align with the public interest.     

Supervised neural network recognition of habitat zones of rice invertebrates

This study aimed to evaluate effectiveness and performance of several supervised neural network models and make pattern recognition on invertebrate habitat zones. Probabilistic, general regression, and linear neural networks, and discriminant analysis were used to recognize both known and unknown invertebrate habitat zones. The results showed that neural network models were better than traditional discriminant analysis in the recognition of known habitat zones. There was not distinctive variation in recognition from different neural network models. Sensitivity analysis indicated that the learning rate of the neural network would influence recognized results. An unknown invertebrate species from Lepidoptera was recognized to be soil-dweller (dryland) by both neural network models and discriminant analysis. In sensitivity analysis it was additionally recognized to be the type of plant canopy (terrestrial). Overall the species was estimated to be a soil-dweller (dryland) or live on plant canopy (terrestrial). It was concluded that neural network models can perform better than conventional statistic models in pattern recognition, but a comprehensive comparison among various models is necessary in order to achieve a high reliable recognition and prediction. Furthermore, sensitivity analysis can lead to an in-depth grasp on the mechanism in the recognition and is thus needed.