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三株赤潮硅藻5.8S rDNA及转录间隔区(ITS)的克隆及序列分析 总被引:1,自引:1,他引:0
对引发赤潮的3株硅藻——1株尖刺拟菱形藻(Pseudo-nitzshia pungens)和2株中肋骨条藻(Skeletonema costatum)的5.8SrDNA和ITS(internal transcribed spacers)序列进行了PCR扩增、克隆和序列测定,并分析了硅藻门10株赤潮藻(7株从GenBank获得)的系统进化关系.研究结果表明,尖刺拟菱形藻的ITS和5.8SrDNA的长度为693bp,SK-1(分离自东海赤潮暴发区)测序得到715bp,除ITS和5.8SrDNA外,还包含部分18SrDNA和28SrDNA;SK-2(分离自青岛养殖场)的ITS和5.8SrDNA的长度为331bp,尖刺拟菱形藻与从GenBank中获得的2株尖刺拟菱形藻相似程度最高,为100%,与该属的多列拟菱形藻相似程度稍低,为82.9%.SK-2的ITS序列与SK-1的相似程度很低,只有51%,但与拟中肋骨条藻的ITS序列相似程度高,为95.5%.SK-1的ITS序列与拟中肋骨条藻的相似程度也低,为56.7%.系统进化树反映的结果与相似性反映的结果一致.研究的该株尖刺拟菱形藻从根据ITS序列研究的结果与形态鉴定的结果看是一致的;SK-2可能属于拟中肋骨条藻;SK-1比较特殊,有待于用其他的方法进一步研究确定其分类地位. 相似文献
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从西菲律宾海底4954 m深的沉积物中分离到一批深海细菌,对其中编号为B2、B5、B6的3株细菌进行了生理、光学显微镜和扫描电镜观察,并且进行了分子水平鉴定。菌落呈圆球形,光滑,3株菌均带有颜色, B6菌呈乳白色, B2和 B5菌分别呈现鲜艳的橙色和红色。扫描电镜观察表明 B2和B6呈杆状,但B6菌外面覆有鞘膜, B5菌呈球状。生理实验表明,3株菌温度生长范围在37℃以下,最适生长温度分别为20、28、28℃,属于耐冷菌范畴。pH耐受范围为6~14,最适pH分别为8、8、12。3株细菌16S rRNA基因序列同源性分析表明,它们分属于芽孢杆菌(Bacillus)、节杆菌(Arthrobacter)、蛋白菌(Acinetobacter)3个不同的菌属。 相似文献
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A harmful algae bloom (HAB) is a dense aggregation of algae in a marine or aquatic environment that can result in significant
environmental problems. To forecast the occurrence of HAB, development of a rapid and precise detection method is urgently
required. In this study, two Skeletonema costatum-like diatoms (SK-1 and SK-2), were identified morphologically under a light microscope, and detected using fluorescent in situ hybridization (FISH). Strain SK-1 was isolated from a frequently HAB affected area of the East China Sea, and strain SK-2
from an aquatic farm in Qingdao, China. Fluorescent DNA probes were designed that were complementary to the ITS sequence (including
5.8S rDNA) of strain SK-1. After hybridization, strong green fluorescence was observed in cells of strain SK-1 under an epifluorescence
microscope; however, no such fluorescence was observed with strain SK-2, which indicates that probes hybridized only the DNA
of the target strain, SK-1, in species-specific manner, and that the two strains do not belong to a same species. This finding
was confirmed by ITS sequence analysis. The FISH technique used in this study was sensitive, simple, and rapid, and is a promising
tool for detecting target HAB species in natural environments. 相似文献
4.
A harmful algae bloom (HAB) is a dense aggregation of algae in a marine or aquatic environment that can result in significant environmental problems. To forecast the occurrence of HAB, development of a rapid and precise detection method is urgently required. In this study, two Skeletonema costatum-like diatoms (SK-1 and SK-2), were identified morphologically under a light microscope, and detected using fluorescent in situ hybridization (FISH). Strain SK-1 was isolated from a frequently HAB affected area of the East China Sea, and strain SK-2 from an aquatic farm in Qingdao, China. Fluorescent DNA probes were designed that were complementary to the ITS sequence (including 5.8S rDNA) of strain SK-1. After hybridization, strong green fluorescence was observed in cells of strain SK-1 under an epifluorescence microscope; however, no such fluorescence was observed with strain SK-2, which indicates that probes hybridized only the DNA of the target strain, SK-1, in species-specific manner, and that the two strains do not belong to a same species. This finding was confirmed by ITS sequence analysis. The FISH technique used in this study was sensitive, simple, and rapid, and is a promising tool for detecting target HAB species in natural environments. 相似文献
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太原是山西省省会,是典型的资源型城市。近年来,随着山西省资源型经济的转型,太原市用地需求与指标缺口的矛盾在全省11个地级市中显得十分突出:为了确保全市重点建设项目及时落地,太原市国土资源局以保障发展为第一要务,以保护资源为根本要求,主动服务破解难题,规范管理促进土地利用方式转变。 相似文献
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绿潮生物学机制研究 总被引:1,自引:4,他引:1
绿潮发生机制极其复杂,但其核心机理是绿潮暴发时漂浮"藻席"中的浒苔快速形成巨大生物量,涉及浒苔生物学过程对环境的响应及其生理生化基础。为此,本文在已有研究报道的基础上,对浒苔生活史研究进行了充分的理论补遗;分析了漂浮"藻席"中浒苔生长与繁殖过程,认为该过程是绿潮生物量形成的关键;阐述了浒苔孢子囊形成是对富营养化背景下海水溶解无机氮(DIN)中硝态氮高占比的响应,认为一氧化氮分子可促进浒苔营养细胞向孢子囊的转化;解析了浒苔细胞对逆境因子的响应途径与机制。基于已有的研究成果,本文对浒苔引发绿潮的生物学过程进行了理论推定。人为或自然因素使固着浒苔处于漂浮状态,形成小规模"藻席";富营养化背景下海水DIN中硝态氮占比的升高赋予了浒苔巨大的繁殖潜能,漂浮过程溶解无机碳(DIC)"充裕"和"不足"两个阶段的交替以及食藻动物啃食产生的藻片段使孢子囊形成比例大幅提升;孢子原位萌发等使释放的孢子在"藻席"中获得了附着基,个体数目随之指数增长;结合漂浮浒苔的高生长速率,"藻席"规模不断扩大,短时间内形成巨大生物量。同时,本文还对今后的绿潮研究提出一些建议,认为啃食动物在浒苔生物量消长过程中发挥重要作用,在... 相似文献
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以坛紫菜丝状体为材料,采用RACE方法获得坛紫菜碳酸酐酶(CA)基因的全长cDNA。该cDNA全长1 081 bp,具有一个825 bp的开放阅读框,可编码274个氨基酸。序列同源性分析显示该cDNA序列推导的氨基酸序列与其他物种的碳酸酐酶具有较高的一致性,其中与条斑紫菜的一致性达到96%。氨基酸序列分析表明该蛋白为β-CA,含有两个CA活性位点,无跨膜结构,可能存在一个信号肽将其定位到叶绿体中,与藻类和细菌聚类。原核诱导表达得到一个72 kDa左右的融合蛋白,酶活测定结果显示此蛋白具有碳酸酐酶活性。该实验对进一步深入研究坛紫菜CA的功能及坛紫菜碳代谢、光合作用等生理过程具有重要的参考价值。 相似文献