Optical water type discrimination and tuning remote sensing band-ratio algorithms: Application to retrieval of chlorophyll and Kd(490) in the Irish and Celtic Seas

This paper assesses the feasibility of applying remote sensing algorithms based on blue/green reflectance ratios to Case 2 waters. Two algorithms from the SeaDAS (NASA) image processing package, OC4v4 for surface chlorophyll concentration, Chl, and K(490) for the attenuation coefficient for downward irradiance at 490 nm, K_d(490), were investigated using an extensive set of observations from the Irish and Celtic Seas. In situ data from a profiling radiometer were used as inputs for the algorithms to avoid uncertainties in atmospheric correction procedures, and direct measurements of Chl and K_d490 and were used for validation purposes. The standard versions of the algorithms performed poorly: OC4v4 generally overestimated Chl (with a very low coefficient of determination), and K(490) progressively underestimated K_d490 for values greater than 0.3 m⁻¹. A two-step procedure for level 2 product generation was therefore devised in which the numerical coefficients of OC4v4 and K(490) were tuned for the two optical water types known to occur most frequently in this region (McKee, D., Cunningham, A., 2006. Identification and characterisation of two optical water types in the Irish Sea from in situ inherent optical properties and seawater constituents. Estuarine, Coastal and Shelf Science 68, 305–316) by statistical regression on a data set of 102 stations from the Irish and Celtic Seas. The water types were distinguished by the magnitude of their normalised water leaving radiance signals at 665 nm, nL_w(665), and appropriate versions of the tuned algorithms applied to each water type. When this procedure was tested on an independent data set of 19 stations from the Bristol Channel, Chl values were recovered with an RMS error of 0.36 mg m⁻³ and K_d(490) values with an RMS error of 0.095 m⁻¹. The identification of water types from water-leaving radiance signals, and the application of band-ratio algorithms tuned for specific water types, may therefore provide a simple means of improving the quality of remote sensing products in optically complex shelf seas.     

How U.S. ocean policy and market power can reform the coral reef wildlife trade

As the world’s largest importer of marine ornamental species for the aquaria, curio, home décor, and jewelry industries, the United States has an opportunity to leverage its considerable market power to promote more sustainable trade and reduce the effects of ornamental trade stress on coral reefs worldwide. Evidence indicates that collection of some coral reef animals for these trades has caused virtual elimination of local populations, major changes in age structure, and promotion of collection practices that destroy reef habitats. Management and enforcement of collection activities in major source countries such as Indonesia and the Philippines remain weak. Strengthening US trade laws and enforcement capabilities combined with increasing consumer and industry demand for responsible conservation can create strong incentives for improving management in source countries. This is particularly important in light of the March 2010 failure of the parties to the Convention on International Trade in Endangered Species (CITES) to take action on key groups of corals.     

Effect of moderate shock waves on magnetic susceptibility and microstructure of a magnetite‐bearing ore

This study demonstrates a relationship between changes of magnetic susceptibility and microstructure developing in minerals of a magnetite‐bearing ore, experimentally shocked to pressures of 5, 10, 20, and 30 GPa. Shock‐induced effects on magnetic properties were quantified by bulk magnetic susceptibility measurements while shock‐induced microstructures were studied by high‐resolution scanning electron microscopy. Microstructural changes were compared between magnetite, quartz, amphibole, and biotite grains. In the 5 GPa sample, a sharp drop of magnetic susceptibility correlates with distinct fragmentation as well as with formation of shear bands and twins in magnetite. At 10 GPa, shear bands and twins in magnetite are accompanied by droplet‐shaped nanograins. In this shock pressure regime, quartz and amphibole still show intensive grain fragmentation. Twins in quartz and foam‐shaped, highly porous amphibole are formed at 20 and 30 GPa. The formation of porous minerals suggests that shock heating of these mineral grains resulted in localized temperature spikes. The identified shock‐induced features in magnetite strongly advise that variations in the bulk magnetic susceptibility result from cooperative grain fragmentation, plastic deformation and/or localized amorphization, and probably postshock annealing. In particular, the increasing shock heating at high pressures is assumed to be responsible for a partial defect annealing which we suggest to be responsible for the almost constant values of magnetic susceptibility above 10 GPa.     

Sedimentary archives of the French Atlantic coast (inner Bay of Vilaine,south Brittany): Depositional history and late Holocene climatic and environmental signals

The late Holocene is of particular interest to our understanding of the evolution of coastal sedimentary systems because this period encompasses warmer and cooler periods, and rising sea level in northern Europe. Based on an approach combining AMS ¹⁴C, sedimentological and rock magnetic analyses on sediment cores complemented with seismic data collected in the macrotidal Bay of Vilaine (south Brittany), we document the depositional history of the inner bay coeval to the mid- to late-Holocene transgression in south Brittany. Correlation between sedimentary archives revealed the main sedimentary infilling phases during the last 6000 years. Four units (U1–U4) are recognized in the coastal sediment wedge of the system, corresponding to the stepwise marine invasion of the bay. We show that (1) marine inundation, due to the steep morphology of the bedrock, is diachronous between distal and proximal records. A time lag of ～1000 years is inferred over a distance of less than 5 km; (2) in the outer areas, the sedimentation has been condensed since 3000 years; (3) proximal estuarine archives offer the best record of sedimentary processes covering the last 2000 years, including the Medieval Warm Period (MWP).Correlations in proximal records in the Bay of Vilaine assess the connection between coastal sedimentary dynamics, climatic conditions and anthropogenic activities during the MWP. We match the preservation of clay deposits to increased river-borne suspended matter transported to the estuary probably as a result of accelerated land-use development (higher soil erosion) in the catchment area between ca. 880 and 1050 AD. Because the preservation of estuarine sedimentary successions is favoured when coastal wave sediment reworking is minimal, it is proposed that the prevailing climatic regime in south Brittany during the MWP likely resembled to that of the preferred negative phase of the North Atlantic Oscillation (NAO). Our data are fairly consistent with other late Holocene records from northern Europe including the Atlantic seaboard. However, they outline the difficulty in interpreting climatic and anthropogenic signatures in coastal sedimentary records where high-resolution chronologies required to unravel their respective influences are still missing.     

Petrology of Philippine geothermal systems and the application of alteration mineralogy to their assessment

Philippine geothermal systems occur in the vicinity of large Holocene calc-alkaline volcanic complexes. Wells drilled in these areas encountered multiple intrusions; the latest dikes are the subsurface manifestations of the youngest heat source. Commonly, at least two hydrothermal regimes are juxtaposed in a single area, with the latest being in equilibrium with the present temperature and chemical regime.Alteration by neutral-pH water is pervasive and abundant. A contact-metamorphic aureole also occurs near intrusives. Alteration due to acid-sulfate fluids is generally confined to permeable structures. Neutral-pH alteration is divided into four zones on the basis of key clay minerals, and two subzones are defined by calc-silicates. These are the smectite (ambient to 180°C), transition (180–230°C), illite (230–320°C) and biotite (270–340°C) zones. Subzones are defined by epidote (250–340°C) and amphibole (280–340°C). The four main zones of acid alteration are: kaolinite (ambient to 120°C), dickite ± kaolinite (120–200°C), dickite ± pyrophyllite (200–250°C), and pyrophyllite ± illite (230–320°C). Where relict high-temperature alteration reaches the surface, the area being drilled is usually the outflow zone of the present system.These hydrothermal mineral assemblages are used: (1) as geothermometers; (2) to assist in determining the depth at which the production casing will be set during drilling; (3) to estimate fluid pH and other chemical parameters; (4) to predict possible corrosion and scaling tendencies of the fluids; (5) as a measure of permeability and possible cold water influx into wells; (6) as a guide to field hydrology; and (7) to estimate roughly the thickness of the eroded overburden.     

Analysis and characterization of the synergistic AIRS and MODIS cloud-cleared radiances

The Atmospheric Infrared Sounder (AIRS) and MODerate-Resolution Imaging Spectroradiometer (MODIS) on board NASA Earth Observing System (EOS) Aqua spacecraft measure the upwelling infrared radiance used for numerous remote-sensing- and climate-related applications. AIRS provides high spectral resolution infrared radiances, while MODIS provides collocated high spatial resolution radiances at 16 broad infrared bands. An optimal algorithm for cloud-clearing has been developed for AIRS cloudy soundings at the University of Wisconsin-Madison, where the spatially and spectrally collocated AIRS and MODIS data has been used to analyze the characteristic of this algorithm. An analysis and characterization of the global AIRS cloud-cleared radiances using the bias and the standard deviation between the cloud-cleared and the nearby clear measurements are studied. Scene inhomogeneity for both land- and water-surface types has been estimated to account for the assessed error. Both monthly and seasonal changes of global AIRS/MODIS cloud-clearing performance also have been analyzed.     

Geophysical exploration of an active pockmark field in the Bay of Concarneau,southern Brittany,and implications for resident suspension feeders

About a decade ago, a large field of pockmarks (individual features up to 30 m in diameter and <2 m deep) was discovered in water depths of 15–40 m in the Bay of Concarneau in southern Brittany along the French Atlantic coast, covering an overall area of 36 km² and characterised by unusually high pockmark densities in places reaching 2,500 per square kilometre. As revealed by geophysical swath and subbottom profile data ground-truthed by sediment cores collected during two campaigns in 2005 and 2009, the confines of the pockmark field show a spectacular spatial association with those of a vast expanse of tube mats formed by a benthic community of the suspension-feeding amphipod Haploops nirae. The present study complements those findings with subbottom chirp profiles, seabed sonar imagery and ultrasonic backscatter data from the water column acquired in April 2011. Results show that pockmark distribution is influenced by the thickness of Holocene deposits covering an Oligocene palaeo-valley system. Two groups of pockmarks were identified: (1) a group of large (>10 m diameter), more widely scattered pockmarks deeply rooted (up to 8 ms two-way travel time, TWTT) in the Holocene palaeo-valley infills, and (2) a group of smaller, more densely spaced pockmarks shallowly rooted (up to 2 ms TWTT) in interfluve deposits. Pockmark pore water analyses revealed high methane concentrations peaking at ca. 400 μl/l at 22 and 30 cm core depth in silty sediments immediately above Haploops-bearing layers. Water column data indicate acoustic plumes above pockmarks, implying ongoing pockmark activity. Pockmark gas and/or fluid expulsion resulting in increased turbidity (resuspension of, amongst others, freshly settled phytoplankton) could at least partly account for the strong spatial association with the phytoplankton-feeding H. nirae in the Bay of Concarneau, exacerbating impacts of anthropogenically induced eutrophication and growing offshore trawling activities. Tidally driven hydraulic pumping in gas-charged pockmarks represents a good candidate as large-scale short-term triggering mechanism of pockmark activation, in addition to episodic regional seismic activity.     

Coupling Mesoscale Modelling with a Simple Urban Model: The Lisbon Case Study

The ongoing trend of urbanisation worldwide is leading to a growing requirement for detailed flow and transport parameterisations to be included within numerical weather prediction (NWP) models. Such models often employ a simple roughness parameterisation for urban areas, which is not particularly accurate in predicting or assessing the flow and dispersion at street scale. Moreover, this kind of parameterisation offers too poor a representation of the mechanical and thermal forcing exerted by urban areas on the larger scale flow. At present, high computational costs and long simulation running times are among the constraints for the implementation of more detailed urban sub-models within NWP models. To overcome such limitations, a downscaling procedure from the atmospheric flow at the synoptic scale to the neighbourhood scale and below, is presented in this study. This is achieved by means of a simple urban model based on a parameterised formulation of the drag exerted by the building on the airflow. Application of the urban model for estimating spatially-averaged mean wind speed and the urban heat island over a selected neighbourhood area in Lisbon, Portugal, is presented. The results show the capability of the urban model to provide more accurate mean wind and temperature profiles. Moreover, the urban model has the advantage of being cost effective, as it requires small computational resources, and thus is suitable to be adopted in an operational context. The model is simple enough to be also used to assess how the resolving of urban surface processes may affect those at the larger scales.