Development of Tide–Surge Interaction Model for the Coastal Region of Bangladesh

In this paper, a two-dimensional, vertically integrated hydrodynamic model is developed taking into account entrained air bubbles during storm surges as well as incorporating inverted barometer, and river and land dynamics. The model is specifically designed for the coastal region of Bangladesh. A nested scheme method with a fine mesh scheme (FMS), capable of incorporating the complex coastline and all major offshore islands accurately, nested into a coarse mesh scheme (CMS) covering up to 15° N latitude in the Bay of Bengal is used. To incorporate the small and big offshore islands in the Meghna estuarine region with its complex coastline accurately, a very fine mesh scheme (VFMS) is again nested into the FMS. Along the northeast corner of the VFMS, the Meghna river discharge is taken into account. The coastal and island boundaries are approximated through proper stair steps. The model equations are solved by a semi-implicit finite difference technique using a staggered C-grid. A stable appropriate tidal condition over the model domain is generated by applying tidal forcing with the four major tidal constituents M ₂, S ₂, K ₁, and O ₁ along the southern open boundary of the CMS. This tidal regime is introduced as the initial state of the sea for nonlinear interaction of tide and surge. The model is applied to simulate water levels due to the interaction of tide and surge associated with the cyclones April 1991 and Aila at different coastal and island locations along the coast of Bangladesh. The results are found to be quite satisfactory with root mean square error of ～0.50 m as calculated for both the storm events. Tests of sensitivities on water levels are carried out for air bubbles, offshore islands, river discharge, inverse barometer, and grid resolution. The presence of air bubbles increases simulated water levels a little bit in our model, and the contribution of air bubbles in increasing water level is found around 2 %. Further, water levels are found to be influenced by offshore islands, river discharge, inverse barometer as well as grid resolution.     

Modeling the Population Effects of Hypoxia on Atlantic Croaker (<Emphasis Type="Italic">Micropogonias undulatus</Emphasis>) in the Northwestern Gulf of Mexico: Part 1—Model Description and Idealized Hypoxia

We developed a spatially explicit, individual-based model to analyze how hypoxia effects on reproduction, growth, and mortality of Atlantic croaker in the northwestern Gulf of Mexico lead to population-level responses. The model follows the hourly growth, mortality, reproduction, and movement of individuals on a 300 × 800 spatial grid of 1-km² cells for 140 years. Chlorophyll-a concentration, water temperature, and dissolved oxygen (DO) were specified daily for each grid cell and repeated for each year of the simulation. A bioenergetics model was used to represent growth, mortality was assumed stage- and age-dependent, and the movement behavior of juveniles and adults was modeled based on temperature and avoidance of low DO. Hypoxia effects were imposed using exposure effect submodels that converted time-varying exposures to low DO to reduced hourly growth, increased hourly mortality, and reduced annual fecundity. Results showed that 100 years of either mild or intermediate hypoxia produced small reductions in population abundance, while repeated severe hypoxia caused a 19% reduction in long-term population abundance. Relatively few individuals were exposed to low DO each hour, but many individuals experienced some exposure. The response was dominated by a 5% average reduction in annual fecundity of individuals. Under conditions of random sequences of mild, intermediate, and severe hypoxia years occurring in proportion to their historical frequency, the model predicted a 10% decrease in the long-term population abundance of croaker. A companion paper substitutes hourly DO values from a three-dimensional water quality model for the idealized hypoxia and results in a more realistic population reduction of about 25%.     

Participatory Vulnerability Reduction (PVR): an urban community-based approach for earthquake management

Participation of local people during any disaster is enormous. They possess better knowledge and information about their own community than anyone else from the outside. This study proposes Participatory Vulnerability Reduction (PVR), a community-based approach for disaster management. The concept of PVR was applied to an urban community of Dhaka city (Ward no. 06 of Dhaka North City Corporation) which has been identified by the Comprehensive Disaster Management Programme as one of the most vulnerable areas of the city for earthquake. PVR consists three steps, and in each step, different participatory urban appraisal tools were used. In the first step, the community people assessed the earthquake vulnerability. It was found that some certain parts of the study area are highly vulnerable due to lack of accessibility to the critical facilities, inadequacy of open space, poor construction practice and unsuitable soil condition for building construction. This was followed by analyzing the root causes and effects of these problems. Structural fragility of the buildings, construction of settlements by filling the low-lying areas and development of slums beside taller buildings are the three major causes behind the above vulnerable issues. In the second step, capacity of the community was assessed in terms of resources and their organizational structure. In the final step, local people developed the strategies to overcome the vulnerability and a community-based organizational set up was proposed to coordinate the collective actions. Although developed in local context, application of PVR is not limited for earthquake and it can be replicated for other communities as well.     

Numerical calculation of free-surface potential flow around a ship using the modified Rankine source panel method

A modified Rankine source panel method is presented for solving a linearized free-surface flow problem with respect to the double-body potential. The method of solution is based on the distribution of Rankine sources on the hull as well as its image and on the free surface. An iterative algorithm is used for determining the free surface and wave resistance using upstream finite difference operator. A verification of numerical modeling is made using the Wigley hull and the validity of the computer program is examined by comparing the details of wave profiles and wave making resistance with Series 60 model.     

Hydrobiological variables as a regulatory factor on the abundance of heterotrophic flagellates in an urban pond

The seasonal abundance of flagellates has been monitored over a period of 1 year from December2013 to November 2014(divided into 4 conjugative seasons namely winter, spring, summer, and autumn) in an experimental pond located in Rajshahi City Corporation area, Bangladesh. To our knowledge, this study is the first to shed light on the occurrence and possible interrelationships among heterotrophic flagellates(HF),bacteria and zooplankton in Bangladesh and the result obtained by this study will be beneficial for similar water ecosystem all over the world. Standard methods were used to determine the prescribed hydrological parameters and zooplankton cell density. Maximum HF abundance(14 346.00 cells/mL) was found in the spring and the minimum(5 215.00 cells/mL) occurred in the summer. Inverse to HF, significantly(P0.05)higher zooplankton abundance was found during the winter(782.00±47.62 cells/mL) and the lowest value was found in the autumn(448.00±39.15 cells/mL). Whereas similar to the HF, total bacterial abundance was significantly higher during the spring((2.25±1.05)×10~5 cells/mL) and lower in the summer((0.79±0.06)×105 cells/mL). Multivariate analyses(ANOSIM and MDS) have shown significant seasonal differences for cell numbers where MDS ordination plot and cluster analysis based on similarity in the genera abundance of HF revealed overlapping condition between winter and spring. Canonical correspondence analysis(CCA) also showed a distinct separation among the genera based on the prevailing hydrological situation and indicated that temperature, pH, BOD_5, and NO_3~- were the most important environmental variables in determining the observed variation in HF community structure. Among the biological factors, zooplankton showed negative but total bacteria were positively correlated with HF abundance.     

Three-Dimensional Petrophysical Modelling and Volumetric Analysis to Model the Reservoir Potential of the Kupe Field,Taranaki Basin,New Zealand

Natural Resources Research - This study addresses the three-dimensional (3D) petrophysical modelling and volumetric analysis of the Farewell Reservoir in the Kupe Field in the southern Taranaki...     

Molecular Identification and Expression Analysis of Carbonic Anhydrase VII in Pufferfish (Takifugu rubripes)

Ocean Science Journal - A carbonic anhydrase VII gene, encoding 277 amino acids, was identified in the intestinal tissue of pufferfish (Takifugu rubripes). The translated protein with an 833-bp...     

Intraspecific morphometric diversity of barramundi (Lates calcariferBloch, 1790) in the waters of southern Bangladesh

A total of 160 barramundi's (Lates calcarifer Bloch, 1790) sampled from four rivers (Tentulia, Balaswar, Bakkhali, and Andarmanik) along the southern coastal region of Bangladesh were investigated in terms of morphometric characters to reveal the intraspecific variation. Twenty-five morphometric measurements were extracted using the conventional method and subjected to multivariate analyses (i.e., principal component analysis (PCA), discriminate function analysis (DFA), cluster analysis (CA)) to distinguish individuals from different rivers. The result demonstrated that twenty-two out of 25 measurements was statistically significant (Univariate ANOVA) among all four populations. PCA analysis of morphometric characters resulted in two principal components, PC I and PCⅡ which accounted for 79.25% and 4.28% of the total data variance. PC I-PC Ⅱ plot explained 83.53% of total variance differentiated the population of L. calcarifer into two groups. Discriminate analysis correctly classified about 88.1% of the examined fish into the four areas. The UPGMA dendrogram showed that Bakkhali populations were the most morphologically different populations in comparison to other populations, while Andarmanik and Balaswar populations were very close to each other. The strong morphometric variation between Bakkhali and Tentulia, Andarmanik and Balaswar was observed in the present study, suggested the evidence of the separate stock population of barramundi in these locations, which might require distinct stock management strategies for resource sustainability in the waters of southern Bangladesh. However, if these findings are supported by further molecular markers and geometric morphometry, this would be a strong indication of different stocks of this population in the four rivers of southern Bangladesh.