Objective measures of the information density of satellite data

Summary We propose and objective method whereby the density of Shannon's information associated with the retrieval of a profile of atmospheric variables from satellite-derived infrared radiance measurements may be estimated. The technique is a natural extension of one we previously proposed to estimate the effective data density in a profile. We test the method in a comparison of simulated satellite instruments to show that the method does indeed provide an objective summary of the spatial distribution of each instrument's information content. We propose that further extensions of the method be developed to include other more traditional data sources in a fully three-dimensional scheme. We also note that analogous and compatible methods may be used to diagnose the information content of meteorological analysis and forecast fields relative to the information contained in the covariance, at the appropriate season, of the corresponding climate fields.With 8 Figures     

A comparative study of the performance of various vertical discretization schemes

Summary Most finite-difference numerical weather prediction models employ vertical discretizations that are staggered, and are low-order (usually second-order) approximations for the important terms such as the derivation of the geopotential from the hydrostatic equation, and the calculation of the vertically integrated divergence. In a sigma-coordinate model the latter is used for computing both the surface pressure change and the vertical velocity. All of the above-mentioned variables can diminish the accuracy of the forecast if they are not calculated accurately, and can have an impact on related quantities such as precipitation.In this study various discretization schemes in the vertical are compared both in theory and in practice. Four different vertical grids are tested: one unstaggered and three staggered (including the widely-used Lorenz grid). The comparison is carried out by assessing the accuracy of the grids using vertical numerics that range from second-order up to sixth-order.The theoretical part of the study examines how faithfully each vertical grid reproduces the vertical modes of the governing equations linearized with a basic state atmosphere. The performance of the grids is evaluated for 2nd, 4th and 6th-order numerical schemes based on Lagrange polynomials, and for a 6th-ordercompact scheme.Our interpretation of the results of the theoretical study is as follows. The most important result is that the order of accuracy employed in the numerics seems to be more significant than the choice of vertical grid. There are differences between the grids at second-order, but these differences effectively vanish as the order of accuracy increases. The sixth-order schemes all produce very accurate results with the grids performing equally well, and with the compact scheme significantly outperforming the Lagrange scheme. A second major result is that for the number of levels typically used in current operational forecast models, second-order schemes (which are used almost universally) all appear to be relatively poor, for other than the lowest modes.The theoretical claims were confirmed in practice using a large number (100) of forecasts with the Australian Bureau of Meteorology Research Centre's operational model. By comparing test model forecasts using the four grids and the different orders of numerics with very high resolution control model forecasts, the results of the theoretical study seem to be corroborated.With 8 Figures     

Behaviour of rainbow trout (Oncorhynchus mykiss) under defensible and indefensible patterns of food delivery

The goal of this study was to investigate the behaviour of rainbow trout (n=30), Oncorhynchus mykiss, in small raceways when either self-feeders (T2) or hand-feeding (t2) were used. The method of food delivery in T2 was defensible while that of t2 was indefensible. Fish in both raceways were subjected to restricted feeding (RF) for 25 days. Food was available in the morning (09:00–10:00) in the downstream area and in the afternoon (16:00–17:00) in the upstream area of the raceways. The results showed that the behaviour of rainbow trout was significantly different under interference competition (T2) for food compared with that under scramble competition (t2). RF in T2 fish limited food availability to meal times when feeding rewards were available while t2 fish only responded to the location of food delivery. The aggressive fish in T2 were dominant, and t2 fish at high densities showed intense social interactions under the indefensible pattern of food distribution; these interactions did not dampen to a minimum level to suppress the development of dominance hierarchies. Further, the stocking density did not break down the dominance hierarchies between the T2 fish. This suggests that decreased efficiency in the search for food or inefficient foraging, induced by interference competition at high densities, affected the behaviour of rainbow trout.     

Resistance of Lophelia pertusa to coverage by sediment and petroleum drill cuttings

In laboratory experiments, the cold-water coral Lophelia pertusa was exposed to settling particles. The effects of reef sediment, petroleum drill cuttings and a mix of both, on the development of anoxia at the coral surface were studied using O₂, pH and H₂S microsensors and by assessing coral polyp mortality. Due to the branching morphology of L. pertusa and the release of coral mucus, accumulation rates of settling material on coral branches were low. Microsensors detected H₂S production in only a few samples, and sulfate reduction rates of natural reef sediment slurries were low (<0.3 nmol S cm⁻³ d⁻¹). While the exposure to sediment clearly reduced the coral’s accessibility to oxygen, L. pertusa tolerated both partial low-oxygen and anoxic conditions without any visible detrimental short-term effect, such as tissue damage or death. However, complete burial of coral branches for >24 h in reef sediment resulted in suffocation.     

Sedimentation, distribution and diagenesis of organic matter in a recent carbonate environment, Abu Dhabi, U.A.E.

In the modern hypersaline carbonate lagoon and sabkha sedimentary environments of Abu Dhabi (United Arab Emirates), three types of organic matter originate respectively from microbial mat, Avicennia mangrove, and Halodule lagoonal seagrass. The study of recent sedimentary processes and cross sections through the sabkha sediments lead to the definition of organo-sedimentary facies based on geochemical and sedimentological criteria. This permits the construction of an organo-sedimentary sequence which expresses the Holocene sedimentary record involving a transgressive and a regressive sequence. The various organic facies occur in both sequences.Heterogeneity within the individual organic facies reflects several factors, including sedimentation dynamics, mineral matrix, oxidation and reduction, and selective organic and mineral diagenesis. These parameters are discussed in terms of depositional environment and location within the organo-sedimentary sequence. Changes in distribution, quantity, and preservation potential of the buried organic matter are discussed in terms of sea level changes and sedimentary accretion rates.     

Conformal octagon: An attractive framework for global models offering quasi-uniform regional enhancement of resolution

Summary With the increasingly widespread adoption of massively parallel processing (MPP) computers for applications in computational fluid dynamics it becomes appropriate to reconsider the geometrical configuration of the computational grid that best suits the problem. In the case of global numerical weather prediction we have recently advocated a conformal spherical-cubic geometry. Among its merits, this grid lends itself naturally to simple domain-decomposition and obviates the need for polar filtering.Here we extend the same principles, but with an emphasis on the problem of regional forecasting. In this case we observe that it is possible to cover the global domain with a conformal grid geometry based on the mapping to the sphere of a back-to-back pair of octagonal regions. In the most symmetrical case, each octagon maps to a hemisphere. By compounding this mapping with a nonhomogeneous conformal mapping of the sphere to itself, one can also arrange to have quasi-uniform enhanced resolution of the resulting grid inside any chosen circle on the sphere, at the expense of relatively coarse resolution degrading gradually with distance outside the circle of interest.With appropriate grid dimensions, the new conformal octagon decomposes naturally into several identical square subdomains for efficient distribution over the nodes of an MPP computer.With 11 Figures     

The influence of drill cuttings on physical characteristics of phytodetritus

Sinking of aggregated phytoplankton cells is a crucial mechanism for transporting carbon to the seafloor and benthic ecosystem, with such aggregates often scavenging particulate material from the water column as they sink. In the vicinity of drilling rigs used by the oil and gas industry, the concentration of particulate matter in the water column may at times be enriched as a result of the discharge of ‘drill cuttings’ - drilling waste material. This investigation exposed laboratory produced phytoplankton aggregates to drill cuttings of various composition (those containing no hydrocarbons from reservoir rocks and those with a <1% hydrocarbon content) and assessed the change in aggregate size, settling rate and resuspension behavior of these using resuspension chambers and settling cylinders. Results indicate that both settling velocity and seabed stress required to resuspend the aggregates are greater in aggregates exposed to drill cuttings, with these increases most significant in aggregates exposed to hydrocarbon containing drill cuttings.     

Sedimentation on the cold-water coral Lophelia pertusa: cleaning efficiency from natural sediments and drill cuttings

Anthropogenic threats to cold-water coral reefs are trawling and hydrocarbon drilling, with both activities causing increased levels of suspended particles. The efficiency of Lophelia pertusa in rejecting local sediments and drill cuttings from the coral surface was evaluated and found not to differ between sediment types. Further results showed that the coral efficiently removed deposited material even after repeated exposures, indicating an efficient cleaning mechanism. In an experiment focusing on burial, fine-fraction drill cuttings were deposited on corals over time. Drill cutting covered coral area increased with repeated depositions, with accumulation mainly occurring on and adjacent to regions of the coral skeleton lacking tissue cover. Tissue was smothered and polyp mortality occurred where polyps became wholly covered by material. Burial of coral by drill cuttings to the current threshold level used in environmental risk assessment models by the offshore industry (6.3 mm) may result in damage to L. pertusa colonies.     

A Bayesian technique for estimating continuously varying statistical parameters of a variational assimilation

Summary ?Nonhydrostatic models with horizontal grid resolutions of around 10 km are becoming operational at several forecasting centers. At these scales it is particularly desirable that the covariances employed in variational or statistical analysis schemes be defined in a more general way than the spatially homogeneous and isotropic covariance models that have been typical in the analysis schemes adopted at larger scales. But allowing covariances to be defined in a more adaptive way leads to a much larger parameter space required to specify them. This note addresses the challenging problem of inferring, from observed meteorological data, a set of continuous parameters defining the error covariances used to analyze data in a variational assimilation scheme. The method we propose is a Bayesian extension of the “maximum-likelihood” technique, which means that prior information about the parameters is brought into play. The method uses a stochastic approximation in the computation of some of the required terms, which are difficult and costly to evaluate by other, more standard methods. One important advantage of the proposed Bayesian approach is that it makes it possible to estimate objectively a spatially dependent but smoothly varying set of parameters in a consistent manner, provided the scale over which the variations occur is sufficiently large. This ability is illustrated in the idealized tests presented here. Received February 23, 2001; revised July 24, 2001