Effects of benthic biology on bottom boundary layer processes, Dry Tortugas Bank, Florida Keys

 An instrumented tetrapod was deployed for three weeks on the Dry Tortugas Bank at a depth of 26 m in February 1995. Bottom roughness was dominated by shrimp burrows and worm mounds with rms roughness amplitudes ranging from 0.47 to 1.75 cm. Logarithmic velocity profiles show apparent total roughness heights ranging from 0.30 to 1.45 cm, values consistent with observed biological roughness. The bed sediments were weakly bound by an algal crust at the sediment–water interface. When this bound layer was scraped away by a mooring that was accidentally dragged, sharp-crested wave-induced ripples appeared within the resulting swath. We conclude that physically induced roughness is biologically suppressed, but if dominant, would be significantly higher than the prevailing biological roughness.     

Sediment Suspension and Deposition Across Restored Oyster Reefs of Varying Orientation to Flow: Implications for Restoration

The eastern oyster, Crassostrea virginica, is a prominent ecosystem engineer, whose reefs exhibit strikingly consistent morphologies at multiple spatial scales throughout its North American range. These distinct morphologies are thought to form by interactions of nascent reef structures with hydrodynamics. We carried out two field studies to determine if historical reef configurations applied in a restoration context would improve reef persistence and restoration outcomes. We collected seabed and water column observations across constructed reefs of three orientations representative of those found historically throughout the oyster’s range: parallel or perpendicular to tidal currents or circular. Areas adjacent to reefs were sites of fine sediment trapping, with lower flow velocities, evidence of particle settling, and more fine sediments on the seabed relative to off-reef reference sites. The water column above the reef crest exhibited higher acoustic backscatter, higher flow velocities, and larger particles in suspension, consistent with local erosion of flocculated fine sediment from the reef crest. Perpendicular reefs produced conditions that were more conducive to reef persistence and improved oyster performance, including high flow velocities and enhanced resuspension of sediments from the reef, compared to parallel or circular reefs. Particle trapping in areas between reefs has the potential to inhibit reef growth between existing reef structures, providing support for hypotheses of landscape-scale reef pattern formation. Oyster reef restoration efforts can benefit from this improved understanding of biophysical interactions arising from reef orientation that contribute to sediment dynamics on constructed oyster reefs.     

Morphological response of tidal marshes,flats and channels of the Outer Yangtze River mouth to a major storm

Systematic morphological changes of the coastline of the outer Yangtze River mouth in response to storms versus calm weather were documented by daily surveys of tidal marshes and flats between April 1999 and May 2001 and by boat surveys offshore during this and earlier periods. The largest single event during 1999 to 2001 was Typhoon Paibaian, which eroded the unvegetated tidal flat and lower marsh and led to accretion on the middle-to-upper marsh and in the subtidal channel. The greatest erosion of 21 cm occurred at the border between the marsh and the unvegetated flat due to the landward retreat of the marsh edge during the storm. Strong waves on the flats increased suspended sediment concentration by 10–20 times. On the upper marsh, where the frequency of submergence by astronomical tides is only 3%, Typhoon Paibian led to 4 cm of accretion, accounting for 57% of the net accretion observed over the 2-yr study. Typhoon Paibian led to 4 cm of accretion, accounting for 57% of the net accretion observed over the 2-yr study. Typhoon Paibian and other large storms in the 1990s caused over 50 cm of accretion along the deep axis of the river mouth outlet channel. During calm weather, when hydrodynamic energy was dominated by tides, deposition was centered on the unvegetated flats and lower, marsh with little deposition on the high marsh and erosion in the subtidal channel. Depositional recovery of the tidal flat from typhoon-induced erosion took only several days, whereas recovery of the subtidal channel by erosion took several weeks. A conceptual model for the morphological responses of tidal marshes, flats, and subtidal channels to storms and calm weather is proposed such that sediment continually moves from regions of highest near-bed energy towards areas of lower energy.     

Multibeam Observations of Mine Burial Near Clearwater, FL, Including Comparisons to Predictions of Wave-Induced Burial

A Kongsberg Simrad EM 3000 multibeam sonar (Kongsberg Simrad, Kongsberg, Norway) was used to conduct a set of six repeat high-resolution bathymetric surveys west of Indian Rocks Beach (IRB), just to the south of Clearwater, FL, between January and March 2003, to observe in situ scour and burial of instrumented inert mines and mine-like cylinders. Three closely located study sites were chosen: two fine-sand sites, a shallow one located in 13 m of water depth and a deep site located in 14 m of water depth; and a coarse-sand site in 13 m. Results from these surveys indicate that mines deployed in fine sand are nearly buried within two months of deployment (i.e., they sunk 74.5% or more below the ambient seafloor depth). Mines deployed in coarse sand showed a lesser amount of scour, burying until they present roughly the same hydrodynamic roughness as the surrounding rippled bedforms. These data were also used to test the validity of the Virginia Institute of Marine Science (VIMS, Gloucester Point, VA) 2-D burial model. The model worked well in areas of fine sand, sufficiently predicting burial over the course of the experiment. In the area of coarse sand, the model greatly overpredicted the amount of burial. This is believed to be due to the presence of rippled bedforms around the mines, which affect local bottom morphodynamics and are not accounted for in the model, an issue currently being addressed by the modelers. This paper focuses specifically on two instrumented mines: an acoustic mine located in fine sand and an optical instrumented mine located in coarse sand.     

Predicting Seabed Burial of Cylinders by Wave-Induced Scour: Application to the Sandy Inner Shelf Off Florida and Massachusetts

A simple parameterized model for wave-induced burial of mine-like cylinders as a function of grain-size, time-varying, wave orbital velocity and mine diameter was implemented and assessed against results from inert instrumented mines placed off the Indian Rocks Beach (IRB, FL), and off the Martha's vineyard coastal observatory (MVCO, Edgartown, MA). The steady flow scour parameters provided by Whitehouse (1998) for self-settling cylinders worked well for predicting burial by depth below the ambient seabed for (0.5 m) diameter mines in fine sand at both sites. By including or excluding scour pit infilling, a range of percent burial by surface area was predicted that was also consistent with observations. Rapid scour pit infilling was often seen at MVCO but never at IRB, suggesting that the environmental presence of fine sediment plays a key role in promoting infilling. Overprediction of mine scour in coarse sand was corrected by assuming a mine within a field of large ripples buries only until it generates no more turbulence than that produced by surrounding bedforms. The feasibility of using a regional wave model to predict mine burial in both hindcast and real-time forecast mode was tested using the National Oceanic and Atmospheric Administration (NOAA, Washington, DC) WaveWatch 3 (WW3) model. Hindcast waves were adequate for useful operational forcing of mine burial predictions, but five-day wave forecasts introduced large errors. This investigation was part of a larger effort to develop simple yet reliable predictions of mine burial suitable for addressing the operational needs of the U.S. Navy.     

Eddy generation in the tidal Potomac River

This paper deals with eddies generated by a shear flow instability in the tidal Potomac River, Maryland-Virginia, USA. An evolution sequence of this robust phenomenon is synthesized using ASTER and Landsat visible imagery, and its growth from small-amplitude waves into mature eddies is shown. Using feature tracking between two nearly contemporaneous ASTER and Landsat images, an, along-river surface velocity profile is computed. Archived velocity and density profiles, taken during accelerating ebb at locations up-river and down-river of the study area indicate the water column is relatively homogenous up-river, but resembles a two-layer fluid down-river where estuarine stratification is present in the lower water column. Velocity variation with depth in the upper water column is relatively small, deviating at mid depth from the near-surface value by only 9–15% at both sites. We examined the horizontal stability properties of this flow by modeling it as inviscid and barotropic., and predicted rapidly growing unstable waves with wavelengths close to the observed ones. Their proximity to the coast, as well as the precise details of the coastline configuration, are shown to have a negligible effect in determining the observed unstable wavelengths.     

Evaluation of hydrologic impact of an irrigation curtailment program using Landsat satellite data

Upper Klamath Lake (UKL) is the source of the Klamath River that flows through southern Oregon and northern California. The UKL Basin provides water for 81,000+ ha (200,000+ acres) of irrigation on the U.S. Bureau of Reclamation Klamath Project located downstream of the UKL Basin. Irrigated agriculture also occurs along the tributaries to UKL. During 2013–2016, water rights calls resulted in various levels of curtailment of irrigation diversions from the tributaries to UKL. However, information on the extent of curtailment, how much irrigation water was saved, and its impact on the UKL is unknown. In this study, we combined Landsat-based actual evapotranspiration (ETa) data obtained from the Operational Simplified Surface Energy Balance model with gridded precipitation and U.S. Geological Survey station discharge data to evaluate the hydrologic impact of the curtailment program. Analysis was performed for 2004, 2006, 2008–2010 (base years), and 2013–2016 (target years) over irrigated areas above UKL. Our results indicate that the savings from the curtailment program over the June to September time period were highest during 2013 and declined in each of the following years. The total on-field water savings was approximately 60 hm³ in 2013 and 2014, 44 hm³ in 2015, and 32 hm³ in 2016 (1 hm3 = 10,000 m³ or 810.7 ac-ft). The instream water flow changes or extra water available were 92, 68, 45, and 26 hm³, respectively, for 2013, 2014, 2015, and 2016. Highest water savings came from pasture and wetlands. Alfalfa showed the most decline in water use among grain crops. The resulting extra water available from the curtailment contributed to a maximum of 19% of the lake inflows and 50% of the lake volume. The Landsat-based ETa and other remote sensing datasets used in this study can be used to monitor crop water use at the irrigation district scale and to quantify water savings as a result of land-water management changes.     

Modeling the morphodynamic response of tidal embayments to sea-level rise

Sea-level rise has a strong influence on tidal systems, and a major focus of climate change effect studies is to predict the future state of these environmental systems. Here, we used a model to simulate the morphological evolution of tidal embayments and to explore their response to a rising sea level. The model was first used to reproduce the formation of channels and intertidal flats under a stable mean water level in an idealised and initially unchannelled tidal basin. A gradual rise in sea level was imposed once a well-developed channel network had formed. Simulations were conducted with different sea-level rise rates and tidal ranges. Sea-level rise forced headward erosion of the tidal channels, driving a landward expansion of the channel network and channel development in the previously non-inundated part of the basin. Simultaneously, an increase in channel drainage width in the lower part of the basin occurred and a decrease in the overall fraction of the basin occupied by channels could be observed. Sea-level rise thus altered important characteristics of the tidal channel network. Some intertidal areas were maintained despite a rising sea level. However, the size, shape, and location of the intertidal areas changed. In addition, sea-level rise affected the exchange of sediment between the different morphological elements. A shift from exporting to importing sediment as well as a reinforcement of the existing sediment export was observed for the simulations performed here. Sediment erosion in the inlet and the offshore transport of sediment was enhanced, resulting in the expansion of the ebb-tidal delta. Our model results further emphasise that tidal embayments can exhibit contrasting responses to sea-level rise.

     

Control of estuarine stratification and mixing by wind-induced straining of the estuarine density field

Observations from the York River Estuary, Virginia, demonstrate that the along-channel wind plays a dominant role in governing the estuarine exchange flow and the corresponding increase or decrease in vertical density stratification. Contrary to previous findings that suggest wind stress acts predominantly as a source of energy to mix away estuarine stratification, our results demonstrate that the wind can play a more important role in straining the along-channel estuarine density gradient. Down-estuary winds enhance the tidally-averaged vertical shear, which interacts with the along-channel density gradient to increase vertical stratification. Up-estuary winds tend to reduce, or even reverse the vertical shear, reducing vertical stratification. In two experiments each lasting approximately a month, the estuarine exchange flow was highly correlated with the along-channel component of the wind. The changes in stratification caused by the exchange flow appear to control the amount of vertical mixing as parameterized by the vertical eddy viscosity. The degree of stratification induced by wind straining also appears to play an important role in controlling the effectiveness of wind and tidal mixing.     

Lateral dynamics and associated transport of sediment in the upper reaches of a partially mixed estuary,Chesapeake Bay,USA

Data from time series of transects made over a tidal period across a section of the upper Chesapeake Bay, USA, reveal the influence of lateral dynamics on sediment transport in an area with a deep channel and broad extents of shallower flanks. Contributions to lateral momentum by rotation (Coriolis plus channel curvature), cross channel density gradients and cross channel surface slope were estimated, and the friction and acceleration terms needed to complete the balance were compared to patterns of observed lateral circulation. During ebb, net rotation effects were larger because of river velocity and reinforcement of Coriolis by curvature. During flood, stratification was greater because of landward advection of strong vertical density gradients. Together, the ebb intensified lateral circulation and flood intensified stratification focused sediment and sediment transport along the left side of the estuary (looking seaward). The tendency for greater stratification on flood and net sediment flux toward the left-hand shoal are contrary to more common models which, in the northern hemisphere, predict greater resuspension on flood and move sediment toward the right-hand shoal. These tidal asymmetries interact with the lateral circulation to focus net sediment flux on the left side of the estuary, and to produce net ebb directed sediment transport at the surface of the same order of magnitude as net flood directed sediment transport at the bottom.