Spatial partitioning between species of the phytoplankton-feeding guild on an estuarine intertidal sand flat and its implication on habitat carrying capacity

The fishery yield of Manila clams, Ruditapes philippinarum, increased considerably in the 1970s but has decreased rapidly since the middle 1980s on extensive intertidal sand flats in Ariake Sound (Kyushu, Japan). A survey conducted in 2004 on a 3.4-km² sand flat located in the central part of the Sound (Shirakawa sand flat) revealed four dominant species: two thalassinidean shrimps (Upogebia major and Nihonotrypaea japonica), which are deep-reaching burrow dwellers with strong bioturbation activities, and two bivalves (Mactra veneriformis and R. philippinarum). All four species belong to a phytoplankton (diatom)-feeding guild. In the late 1970s, the Manila clam population prevailed in high densities over the entire sand flat, whereas its distribution was restricted to the lowest quarter of the shore in 2004. In contrast, the population sizes and zones of occurrence of the other phytoplankton feeders have expanded in the absence of R. philippinarum, perhaps an indication of competitive release. After establishment, effects of the thalassinidean shrimps on sediment stability appear to have further reduced clam abundances. Across the sand flat in 2004, wet weight population biomass estimates for N. japonica, U. major, M. veneriformis, and R. philippinarum (whole body for shrimps and soft tissue for bivalves) were 304, 111, 378, and 234 tonnes, respectively. Based on Manila clam fishery yield records from Shirakawa, the carrying capacity of the Shirakawa sand flat in the late 1970s was estimated to be two times greater than the sum value for the whole phytoplankton-feeding guild in 2004. It is hypothesized that (1) the amount of phytoplankton determines the carrying capacity for the benthic community on the Shirakawa sand flat, with both phytoplankton and benthic biomass at maxima in the late 1970s, and (2) the subsequent increases in competition for space have caused further declines in the Manila clam population biomass to approximately one-eighth of its past value.     

The Kellwasser events in the Upper Devonian Frasnian to Famennian transition in the Toc Tat Formation,northern Vietnam

Upper Devonian carbonates of the Toc Tat Formation in the Si Phai Pass area of Dong Van District, northern Vietnam were deposited in carbonate platform, slope, and basin environments. These carbonates yield abundant conodonts indicative of the Palmatolepis nasuta, Pa. linguiformis and Pa. triangularis zones, the Frasnian–Famennian stage boundary being identified by the first occurrence of Pa. triangularis. Two positive carbon isotope excursions are recognized, the lower excursion peaking in the interval of the lower to middle Pa. nasuta Zone, whilst the upper excursion peaks just above the local Frasnian–Famennian boundary. Based on the biostratigraphy, these excursions equate to the Lower and Upper Kellwasser events. Locally, tentaculitoid taxa (Nowakia, Styliolina, Homoctenus, and Metastyliolina?) are abundant in the interval of the Pa. nasuta Zone, but show a drastic decline in abundance before the Lower Kellwasser Event, and only two taxa survived into the Famennian.     

Evolution processes of Ordovician–Devonian arc system in the South‐Kitakami Massif and its relevance to the Ordovician ophiolite pulse

The South Kitakami Massif is one of the oldest geological domains in Japan having Silurian strata with acidic pyroclastic rocks and Ordovician–Silurian granodiorite–tonalite basement, suggesting that it was matured enough to develop acidic volcanisms in the Silurian period. On the northern and western margin of the South Kitakami Massif, an Ordovician arc ophiolite (Hayachine–Miyamori Ophiolite) and high‐pressure and low‐temperature metamorphic rocks (Motai metamorphic rocks) exhumed sometime in the Ordovician–Devonian periods are distributed. Chronological, geological, and petrochemical studies on the Hayachine–Miyamori Ophiolite, Motai metamorphic rocks, and other early Paleozoic geological units of the South Kitakami Massif are reviewed for reconstruction of the South Kitakami arc system during Ordovician to Devonian times with supplementary new data. The reconstruction suggests a change in the convergence polarity from eastward‐ to westward‐dipping subduction sometime before the Late Devonian period. The Hayachine–Miyamori Ophiolite was developed above the eastward‐dipping subduction through three distinctive stages. Two separate stages of overriding plate extension inducing decompressional melting with minor involvement of slab‐derived fluid occurred before and after a stage of melting under strong influence of slab‐derived fluids. The first overriding plate extension took place in the back‐arc side forming a back‐arc basin. The second one took place immediately before the ophiolite exhumation and near the fore‐arc region. We postulate that the second decompressional melting was triggered by slab breakoff, which was preceded by slab rollback inducing trench‐parallel wedge mantle flow and non‐steady fluid and heat transport leaving exceptionally hydrous residual mantle. The formation history of the Hayachine–Miyamori Ophiolite implies that weaker plate coupling may provide preferential conditions for exhumation of very hydrous mantle. Very hydrous peridotites involved in arc magmatism have not yet been discovered except for in the Cambrian–Ordovician periods, suggesting its implications for global geodynamics, such as the thermal state and water circulation in the mantle.     

Projected future changes in the contribution of Indo-Pacific sea surface height variability to the Indonesian throughflow

The Indonesian throughflow (ITF) transports a significant amount of warm freshwater from the Pacific to the Indian Ocean, making it critical to the global climate system. This study examines decadal ITF variations using ocean reanalysis data as well as climate model simulations from the Coupled Model Inter-comparison Project Phase 5 (CMIP5). While the observed annual cycle of ITF transport is known to be correlated with the annual cycle of sea surface height (SSH) difference between the Pacific and Indian Oceans, ocean reanalysis data (1959–2015) show that the Pacific Ocean SSH variability controls more than 85% of ITF variation on decadal timescales. In contrast, the Indian Ocean SSH variability contributes less than 15%. While those observed contributions are mostly reproduced in the CMIP5 historical simulations, an analysis of future climate projections shows a 25–30% increase in the Indian Ocean SSH variability to decadal ITF variations and a corresponding decrease in the Pacific contribution. These projected changes in the Indian Ocean SSH variability are associated with a 23% increase in the amplitudes of negative zonal wind stress anomalies over the equatorial Indian Ocean, along with a 12º eastward shift in the center of action in these anomalies. This combined effect of the increased amplitude and eastward shift in the zonal wind stress increases the SSHA variance over the Indian Ocean, increasing its contribution to the ITF variation. The decadal ITF changes discussed in this study will be crucial in understanding the future global climate variability, strongly coupled to Indo-Pacific interactions.

     

Intraseasonal SST-precipitation relationship and its spatial variability over the tropical summer monsoon region

The SST-precipitation relationship in the intraseasonal variability (ISV) over the Asian monsoon region is examined using recent high quality satellite data and simulations from a state of the art coupled model, the climate forecast system version 2 (CFSv2). CFSv2 demonstrates high skill in reproducing the spatial distribution of the observed climatological mean summer monsoon precipitation along with its interannual variability, a task which has been a conundrum for many recent climate coupled models. The model also exhibits reasonable skill in simulating coherent northward propagating monsoon intraseasonal anomalies including SST and precipitation, which are generally consistent with observed ISV characteristics. Results from the observations and the model establish the existence of spatial variability in the atmospheric convective response to SST anomalies, over the Asian monsoon domain on intraseasonal timescales. The response is fast over the Arabian Sea, where precipitation lags SST by ~5 days; whereas it is slow over the Bay of Bengal and South China Sea, with a lag of ~12 days. The intraseasonal SST anomalies result in a similar atmospheric response across the basins, which consists of a destabilization of the bottom of the atmospheric column, as observed from the equivalent potential temperature anomalies near the surface. However, the presence of a relatively strong surface convergence over the Arabian Sea, due to the presence of a strong zonal gradient in SST, which accelerates the upward motion of the moist air, results in a relatively faster response in terms of the local precipitation anomalies over the Arabian Sea than over the Bay of Bengal and South China Sea. With respect to the observations, the ocean–atmosphere coupling is well simulated in the model, though with an overestimation of the intraseasonal SST anomalies, leading to an exaggerated SST-precipitation relationship. A detailed examination points to a systematic bias in the thickness of the mixed layer of the ocean model, which needs to be rectified. A too shallow (deep) mixed layer enhances (suppress) the amplitude of the intraseasonal SST anomalies, thereby amplifying (lessening) the ISV and the active-break phases of the monsoon in the model.     

Multiple-tracers-aided surface-subsurface hydrological modeling for detailed characterization of regional catchment water dynamics in Kumamoto area,southern Japan

Hydrogeology Journal - Integrated watershed modeling techniques have been applied in recent years to examine surface and subsurface interactions. Model performance is often evaluated by best fit of...     

Growth rate is temperature‐dependent,but the proportion of resource allocation between the growth and gonads is not,in early adult stage of the lancelet branchiostoma japonicum

The pattern of resource allocation into multiple life‐history traits can vary with the environment; for example, high temperatures generally facilitate growth. Changes in investment in growth due to temperature may alter the allocation to other traits that are in trade‐off with that. Here, we investigated the trade‐off between growth and reproduction and whether the proportion of allocation to these varies with increasing seawater temperature in the lancelet Branchiostoma japonicum. We reared the lancelets of early adult stage under three different temperature treatments (control, + 1°C and + 2°C treatments) for 427 days in the laboratory. Although the total body length at initiation did not differ between treatments, the length was influenced by the interaction between elapsed days and temperature treatments, suggesting that growth rate was temperature‐dependent; the lancelets under higher temperature conditions showed a more rapid growth rate than did those under the control conditions. The frequency of individuals with gonads did not differ between treatments throughout their reproductive season. The monthly growth increments were also not significantly affected by the interaction between the presence/absence of gonads and temperature treatments, although the presence of gonads caused the growth increments to decrease. In addition, the effect of temperature treatments was significant. These results suggest that changes in temperature did not alter the pattern of allocation between growth and reproduction that were in a trade‐off, whereas high temperature would solely result in an increase in resource intake, at least in the early adult stage of this species.     

Perturbed physics ensemble using the MIROC5 coupled atmosphere–ocean GCM without flux corrections: experimental design and results

In this study, we constructed a perturbed physics ensemble (PPE) for the MIROC5 coupled atmosphere–ocean general circulation model (CGCM) to investigate the parametric uncertainty of climate sensitivity (CS). Previous studies of PPEs have mainly used the atmosphere-slab ocean models. A few PPE studies using a CGCM applied flux corrections, because perturbations in parameters can lead to large radiation imbalances at the top of the atmosphere and climate drifts. We developed a method to prevent climate drifts in PPE experiments using the MIROC5 CGCM without flux corrections. We simultaneously swept 10 parameters in atmosphere and surface schemes. The range of CS (estimated from our 35 ensemble members) was not wide (2.2–3.2?°C). The shortwave cloud feedback related to changes in middle-level cloud albedo dominated the variations in the total feedback. We found three performance metrics for the present climate simulations of middle-level cloud albedo, precipitation, and ENSO amplitude that systematically relate to the variations in shortwave cloud feedback in this PPE.     

The comoving-frame equation of radiative transfer in a curvilinear coordinate system

The comoving-frame equation of radiative transfer and moment equations are derived in orthogonal, curvilinear coordinates, inclusive of terms of orderv/c. The equation of radiative transfer, which contains the terms due to the effect of curvature of coordinate lines explicitly as well as those of Doppler shift and aberration, is the generalization of Castor's equation for spherical symmetry and of Buchler's equation for Cartesian coordinates. The moment equations agree with Buchler's.