Preservation of the shell matrix protein dermatopontin in 1500 year old land snail fossils from the Bonin islands

Organic molecules such as proteins can be preserved in certain fossils. The bulk properties of fossil proteins of both vertebrates and invertebrates have been studied for over half a century. Named proteins have so far been identified, however, only in vertebrate fossils, such as collagen from mammoth bones. Using immunological assays, we examined 1500 year old fossils of the extinct land snail Mandarina luhuana from the Bonin islands for the presence of dermatopontin, a molluscan shell matrix protein. First, we examined the shell microstructure and mineralogy of the fossil shells using scanning electron microscopy (SEM) and powder X-ray diffraction (XRD) in order to estimate the extent of diagenetic alteration. The results suggest that the original microstructure and mineralogy of the shells are preserved. Antiserum raised against the Type-1 dermatopontin fragment of the living land snail Euhadra brandtii showed significant immunological reactivity with the extracts from the fossil shells of M. luhuana. Immunological binding curves drawn for the shell extracts of extant M. aureola and the extinct M. luhuana confirmed the presence of dermatopontin in the fossil shells and provided an estimate that about 75–98% of the original dermatopontin was lost from the M. luhuana fossils. This is the first report of a named protein being identified in invertebrate fossils.     

In situ strength measurements on natural upper-mantle minerals

Using in situ strength measurements at pressures up to 10 GPa and at room temperature, 400, 600, and 700°C, we examined rheological properties of olivine, orthopyroxene, and chromian-spinel contained in a mantle-derived xenolith. Mineral strengths were estimated using widths of X-ray diffraction peaks as a function of pressure, temperature, and time. Differential stresses of all minerals increase with increasing pressure, but they decrease with increasing temperature because of elastic strain on compression and stress relaxation during heating. During compression at room temperature, all minerals deform plastically at differential stress of 4–6 GPa. During subsequent heating, thermally induced yielding is observed in olivine at 600°C. Neither orthopyroxene nor spinel shows complete stress relaxation, but both retain some stress even at 700°C. The strength of the minerals decreases in the order of chromian-spinel ≈ orthopyroxene > olivine for these conditions. This order of strength is consistent with the residual pressure of fluid inclusions in mantle xenoliths.     

Preferential concentration of marine particles in isotropic turbulence

The effect of small-scale turbulence on marine and aquatic particle transport has traditionally been to act as a means for creating homogeneous distributions. However, previous numerical simulations of heavy particle transport in turbulent flows have shown that particles are preferentially concentrated by turbulence and that effects of preferential concentration are most pronounced for particle parameters comparable to the Kolmogorov scales. Therefore, the focus of the present work is examination of the preferential concentration of marine particles. Application of Kolmogorov scaling indicates that effects of preferential concentration may be important for marine particles with diameters of order 1 mm in the upper mixed layer. Numerical simulations of unstratified isotropic turbulence are then used to support the notion that preferential concentration of particles possessing material characteristics representative of those encountered in marine environments can occur. In the simulations, particles of order 1 mm diameter are idealized as rigid spheres with a density ratio of 1.005. Simulation results demonstrate preferential concentration with peak particle number densities ranging from 10 to 60 times the global mean value. Implications of preferential concentration are also discussed, together with the limitations of the approach employed in the present study.     

Temporal behavior of the background seismicity rate in central Japan, 1998 to mid-2003

We studied the temporal behavior of the background shallow seismicity rate in 700 circular areas across inland Japan. To search for and test the significance of the possible rate changes in background seismicity, we developed an efficient computational method that applies the space–time ETAS model proposed by Ogata in 1998 to the areas. Also, we conducted Monte Carlo tests using a simulated catalog to validate the model we applied. Our first finding was that the activation anomalies were found so frequently that the constant background seismicity hypothesis may not be appropriate and/or the triggered event model with constraints on the parameters may not adequately describe the observed seismicity. However, quiescence occasionally occurs merely by chance. Another outcome of our study was that we could automatically find several anomalous background seismicity rate changes associated with the occurrence of large earthquakes. Very significant seismic activation was found before the M6.1 Mt. Iwate earthquake of 1998. Also, possible seismic quiescence was found in an area 150 km southwest of the focal region of the M7.3 Western Tottori earthquake of 2000. The seismicity rate in the area recovered after the mainshock.     

Soil-structure interaction analysis of the Hualien containment model

This paper presents results from forced vibration tests, microtremor observations and earthquake response analysis of a nuclear reactor containment model constructed on stiff soil in Hualien, Taiwan. The dynamic behavior of the soil-structure system is simulated successfully with two numerical models: a sway-rocking model, whose soil parameters are evaluated on the basis of the continuum formulation method, and a finite element model, using the program SASSI with the flexible volume substructuring approach. The dependences of the soil parameters of both models on the amplitudes of the different dynamic excitations are investigated in detail. An original numerical simulation of microtremor is performed. Comparison with results of a previous study involving a rigid tower on a soft soil site in Chiba, Japan is offered.     

Fundamental study on the response characteristics of drivers during an earthquake based on driving simulator experiments

After the 1995 Kobe earthquake, the expressway structures in Japan were retrofitted and they will not now be seriously damaged under a certain level of strong earthquake motion. However, the stability of a moving vehicle has not been investigated yet. It has been reported that drivers feel seismically induced vibrations, especially in the transverse direction of vehicles. Owing to this phenomenon, drivers have some difficulty in controlling the vehicles during strong shaking. For further safety promotion of the expressway networks, it is important to understand the drivers' reactions to seismic motion. The present authors have performed a series of seismic response analyses of a moving vehicle to investigate its response characteristics based on numerical simulation. However, the responses of the driver were not considered in the simulation process. In order to investigate the drivers' reactions during an earthquake, a series of virtual tests were conducted using a driving simulator. This driving simulator has six servomotor‐powered electric actuators that control its motions. Several types of tests were carried out for different examinees to investigate drivers' responses while controlling the simulator under seismic motion. The results of this study showed that a larger response time lag to strong shaking and over turning of the steering wheel may shift the vehicle into the next lane. According to this finding, trafficaccidents could possibly occur under strong ground shaking in the case of heavy traffic. Copyright © 2004 John Wiley & Sons, Ltd.     

Sequence of faulting and deformation during the 2000 eruptions of the Usu Volcano, Hokkaido, Japan—interpretation and image analyses of aerial photographs

Significant faulting and deformation of the ground surface has been rarely known during volcanic eruptions. Usu Volcano, Hokkaido, Japan, is a unique example of deformation due to felsic magma intrusion. Usu Volcano has a history of such types of eruptions as phreatic, pumice eruption (Plinian type), pyroclastic flowing and lava doming since 1663. On March 31, 2000, phreatomagmatic to phreatic eruptions took place after 23 years of dormancy in the western piedmont, followed by explosions on the western flank of Usu Volcano. They were associated with significant deformation including faulting and uplift. The eruptions and deformation were continuing up to the end of May 2000.We identified the faulting using total nine sets of aerial photographs taken from before the eruption (March 31, 2000) to more than 1 year (April 27, 2001) after the end of the activity, and traced deformation processes through image processing using aerial photographs. We found that some of the new faults and the associated phreatic eruptions were related to old faults formed during the 1977–1981 eruptive episode.The image processing has revealed that the surface deformation is coincident with the area of faulting forming small grabens and the phreatic explosion vents. However, the faulting and main explosive eruptions did not take place in the highest uplift area, but along the margin. This suggests that the faulting and explosive activities were affected by small feeder channels diverging from the main magma body which caused the highest uplift.     

Tropical synoptic-scale wave disturbances over the western Pacific simulated by a global cloud-system resolving model

Lower-tropospheric tropical synoptic-scale disturbances (TSDs) are associated with severe weather systems in the Asian Monsoon region. Therefore, exact prediction of the development and behavior of TSDs using atmospheric general circulation models is expected to improve weather forecasting for this region. Recent state-of-the art global cloud-system resolving modeling approaches using a Nonhydrostatic Icosahedral Atmospheric Model (NICAM) may improve representation of TSDs. This study evaluates TSDs over the western Pacific in output from an Atmospheric Model Intercomparison Project (AMIP)-like control experiment using NICAM. Data analysis compared the simulated and observed fields. NICAM successfully simulates the average activity, three-dimensional structures, and characteristics of the TSDs during the Northern summer. The variance statistics and spectral analysis showed that the average activity of the simulated TSDs over the western Pacific during Northern summer broadly captures that of observations. The composite analysis revealed that the structures of the simulated TSDs resemble the observed TSDs to a large degree. The simulated TSDs exhibited a typical southeast- to northwest-oriented wave-train pattern that propagates northwestward from near the equator around 150 ^° E toward the southern coast of China. However, the location of the simulated wave train and wave activity center was displaced northward by approximately a few degrees of latitude from that in the observation. This displacement can be attributed to the structure and strength of the background basic flow in the simulated fields. Better representation of the background basic states is required for more successful simulation of TSDs.