State Estimation of the North Pacific Ocean by a Four-Dimensional Variational Data Assimilation Experiment

A four-dimensional variational data assimilation system has been applied to an experiment to describe the dynamic state of the North Pacific Ocean. A synthesis of available observational records and a sophisticated ocean general circulation model produces a dynamically consistent dataset, which, in contrast to the nudging approach, provides realistic features of the seasonally-varying ocean circulation with no artificial sources/sinks for temperature and salinity fields. This new dataset enables us to estimate heat and water mass transports in addition to the qualification of water mass formation and movement processes. A sensitivity experiment on our assimilation system reveals that the origin of the North Pacific Intermediate Water can be traced back to the Sea of Okhotsk and the Bering Sea in the subarctic region and to the subtropical Kuroshio region further south. These results demonstrate that our data assimilation system is a very powerful tool for the identification and characterization of ocean variabilities and for our understanding of the dynamic state of ocean circulation. This revised version was published online in July 2006 with corrections to the Cover Date.     

Effects of mass source/sink at the western boundary on the wind-driven gyres: Implications for the ventilation of the north pacific intermediate layer through convection in the Okhotsk Sea and tidal mixing at the Kuril Straits

A steady quasi-geostrophic 2.5-layer model, forced by both Ekman pumping and a mass source/sink situated at the western boundary has been constructed to investigate the effect of diapycnal transport due to convection in the Okhotsk Sea and tidal mixing at the Kuril Straits on the intermediate layer in the North Pacific. The model illustrates a combined effect of the wind-driven and mass-driven circulations. First, net mass input induces a “barotropic” mode inter-gyre flow along the western boundary through the dynamical influence of Kelvin waves. This flow creates characteristic curves (geostrophic contours) that facilitate inter-gyre communication through the western boundary layer from the location of the mass source to the subtropical gyre. Due to the effect of wind-driven circulation, the offshore part turns eastward into the interior, encircles the outer rim of the region (which would otherwise be the pool region in the absence of mass input), and then encounters the western boundary. Eventually, the water fed into the lower layer flows mostly along this path and later flows away to the equatorial region. Conversely, in the upper layer, water is fed from the equator to the subtropics, and to the subpolar interior region through the western boundary current. The water then circulates along the outer rim and is absorbed into the mass sink. The model is controlled mainly by three nondimensional parameters: (1) the ratio of net mass input rate to the maximum Sverdrup transport (Q/T _Sv ^max ), which affects the inter-gyre communication by altering the paths of geostrophic contours, (2) the ratio of a mass input rate into the lower layer to that in total (Q ₂/Q), which controls the vertical structure of the inter-gyre flow, and (3) the measure of the wind forcing effect relative to the β effect, which determines the horizontal extent of the area influenced by the mass input. The other parameter regimes with respect to Q/T _Sv ^max and Q ₂/Q are also presented.     

NEUTRON ACTIVATION ANALYSIS OF FIFTEEN GSJ IGNEOUS ROCK REFERENCE SAMPLES

Fifteen rock reference samples "Igneous rock series" issued by the Geological Survey of Japan were analysed for up to 31 elements by neutron activation analysis (NAA); 14 MeV-NAA for Si and Al, fission track method for U, radiochemical and instrumental NAA for rare-earth elements, and instrumental NAA for the remaining elements, with reactor neutrons for the latter three. The present results are compared with published values.     

Measurements of stable carbon isotopic composition of ethane and propane over the western North Pacific and eastern Indian Ocean: A useful indicator of atmospheric transport process

Stable carbon isotopic composition of ethane and propane over the western North Pacific and eastern Indian Ocean between 31°N and 26°S was investigated from February through March 2004. The isotopic composition of ethane ranged from −28 to −18‰ and showed a gradual increase from north to south. Conversely, that of propane was between −31 and −24‰; it showed no systematic latitudinal variation. Investigation of the ethane/propane ratio indicates that ethane and propane that originated from northern mid-latitude countries in the eastern part of Eurasia were both transported into the western North Pacific region. However, the results of the isotopic analyses indicate the contribution of oceanic emission to the atmospheric propane during transport, although that contribution can not be discerned for ethane. A ship based stationary observation conducted in the western equatorial North Pacific showed that the isotopic composition of ethane varied from −25 to −19‰ and showed clear systematic diurnal variation: propane ranged between −32 to −26‰ and no such isotopic diurnal signal was observed. The diurnal variation for ethane is explained by entrainment of free tropospheric air, whereas the variation for propane was influenced by oceanic emissions as well as the entrainment. The contribution of oceanic emissions to the atmospheric propane inventory was considered from our isotopic observation. Isotopic composition of dissolved propane is estimated to be less than −38‰, and the contribution up to 79% was calculated when the isotopic composition of dissolved propane is assumed to be −40‰. Our study demonstrates that isotopic analysis can be more useful than ratio-based analysis to improve our present understanding of transport processes, especially for impact of the oceanic emissions on the atmospheric distribution of low level C₂–C₅ non-methane hydrocarbons such as propane in the remote marine atmosphere.     

Development of radiation-damage halos in low-quartz: cathodoluminescence measurement after He+ ion implantation

Summary ?In cathodoluminescence (CL) images of synthetic low-quartz samples after He⁺ implantation at 4 MeV with a dose density over 1.14 × 10⁻⁴ C cm⁻², bright CL halos of about 14 μm in width from the implantation surface are recognized. These widths are consistent with the theoretical range. This confirms experimentally that the CL halos in low-quartz found in geological samples are formed by alpha radiation. It also shows that CL colour continuously changes with dose density, demonstrating that it is possible to use the CL halo as a new dosimeter that is useful for dating and analysis of radionuclide migration in natural geological media. Received December 3, 2001; revised version accepted February 27, 2002     

Microbial responses using denaturing gradient gel electrophoresis to oil and chemical dispersant in enclosed ecosystems

Microbial responses to the addition of oil with or without a chemical dispersant were examined in mesocosm and microcosm experiments by using denaturing gradient gel electrophoresis of bacterial ribosomal DNA and direct cell counting. When a water-soluble fraction of oil was added to seawater, increases in cell density were observed in the first 24h, followed by a decrease in abundance and a change in bacterial species composition. After addition of an oil-dispersant mixture, increases in cell density and changes in community structure coincided, and the amount of bacteria remained high. These phenomena also occurred in response to addition of only dispersant. Our results suggest that the chemical dispersant may be used as a nutrient source by some bacterial groups and may directly or indirectly prevent the growth of other bacterial groups.     

Biogeochemistry of nitrous oxide in groundwater in a forested ecosystem elucidated by nitrous oxide isotopomer measurements

The biological and physical controls on microbial processes that produce and consume N₂O in soils are highly complex. Isotopomer ratios of N₂O, with abundance of ¹⁴N¹⁵N¹⁶O, ¹⁵N¹⁴N¹⁶O, and ¹⁴N¹⁴N¹⁸O relative to ¹⁴N¹⁴N¹⁶O, are promising for elucidation of N₂O biogeochemistry in an intact ecosystem. Site preference, the nitrogen isotope ratio of the central nitrogen atom minus that of the terminal nitrogen atom, is useful to distinguish between N₂O via hydroxylamine oxidation and N₂O via nitrite reduction.We applied this isotopomer analysis to a groundwater system in a temperate coniferous-forested ecosystem. Results of a previous study at this location showed that the N₂O concentration in groundwater varied greatly according to groundwater chemistry, i.e. NO₃⁻, DOC, and DO, although apportionment of N₂O production to nitrification or denitrification was ambiguous. Our isotopic analysis (δ¹⁵N and δ¹⁸O) of NO₃⁻ and N₂O implies that denitrification is the dominant production process of N₂O, but definitive information is not derived from δ¹⁵N and δ¹⁸O analysis because of large variations in isotopic fractionations during production and consumption of N₂O. However, the N₂O site preference and the difference in δ¹⁵N between NO₃⁻ and N₂O indicate that nitrification contributes to total N₂O production and that most measured N₂O has been subjected to further N₂O reduction to N₂. The implications of N₂O biogeochemistry derived from isotope and isotopomer data differ entirely from those derived from conventional concentration data of DO, NO₃⁻, and N₂O. That difference underscores the need to reconsider our understanding of the N cycle in the oxic-anoxic interface.     

Development of a 2-km resolution ocean model covering the coastal seas around Japan for operational application

Ocean Dynamics - In order to expand the coastal ocean monitoring and forecasting system of the Japan Meteorological Agency from the Seto Inland Sea to the entire coastal seas of Japan, a 2-km...     

Size fraction and class composition of phytoplankton in the Antarctic marginal ice zone along the 140°E meridian during February–March 2003

We investigated the size fraction and pigment-derived class compositions of phytoplankton within the euphotic zone of the Antarctic marginal ice zone between 63.3°S and 66.5°S along the 140°E meridian on two consecutive cruises in the late austral summer and early austral autumn of 2003. We observed significant temporal and spatial variations in phytoplankton size and taxonomic composition, although chlorophyll a concentrations were generally below 1 μg l⁻¹ during both periods. Microphytoplankton (>20 μm), mainly diatoms, were prominent in the euphotic zone in the southernmost area around 66.5°S during late summer. In the rest of the study area during both cruises, the phytoplankton community was dominated by pico- and nano-sized populations (<20 μm) throughout the euphotic zone. The small-size populations mostly consisted of diatoms and haptophytes, although chlorophytes were dominant in extremely cold water (−1.5°C) below the overlying warm water around 65.5°S during late summer. From late summer to early autumn, chlorophytes declined in abundance, probably due to increasing temperature within the euphotic zone (−1 to 0°C). These pico- and nano-phytoplankton-dominated populations were often accompanied by relatively high concentrations of ammonium, suggesting the active regeneration of nutrients within the small-size plankton community.     

Temporal variations in channel patterns and facies architecture in a gravelly fluvial system: The Paleogene Iwaki Formation on the Joban Coalfield,a forearc basin in Northeast Japan

This paper examined sequence‐stratigraphic features of a gravelly fluvial system of the Iwaki Formation, which developed in a forearc‐basin setting in Northeast Japan during the Eocene through Oligocene. On the basis of three‐dimensional architectural element analysis, we discriminated three major cycles of channel complexes, which contain ten component channel deposits in total in the fluvial succession. Component channel deposits in the uppermost part of each cycle are sandier and associated with overbank muddy deposits and coal beds as compared with those in the lower part of the cycle. Mean clast‐size also decreases upsection in the entire gravelly fluvial deposits. The fluvial succession is interpreted to have been deposited in response to an overall rise in relative sea level that was superimposed by three short‐term relative sea‐level rises on the basis of vertical stacking patterns and component lithofacies features of channel deposits, and of correlation of the fluvial succession with an age‐equivalent marine succession in an area about 50 km offshore. However, geometry and stacking patterns of the channel complexes do not exhibit any distinct temporal variation and amalgamated channel and bar deposits are dominant throughout the transgressive fluvial succession. On the other hand, an overall fining‐upward pattern of the entire Iwaki Formation fluvial deposits in association with three component fining‐upward patterns is distinct, and is interpreted to be consistent with the tenet of the standard fluvial sequence‐stratigraphic models. This indicates that the present example represents one type of variation in the standard fluvial sequence‐stratigraphic models, possibly reflecting the forearc‐basin setting, which is generally represented by higher valley slope, higher shedding of coarse‐grained sediments, and shorter longitudinal profiles to the coastal area as compared with a passive‐continental‐margin setting.