Le rôle des plantes dans le transfert du silicium à la surface des continentsThe role of plants in the transfer of silicon at the surface of the continents

Silicon is the most abundant element after oxygen in the lithosphere (27 wt%). Plants and soil microorganisms are important contributors to the weathering of silicates. Plants are able to accumulate several percent of Si in the biomass. The importance of plants in the rates of Si output to surface waters is discussed in this paper. To cite this article: J.-D. Meunier, C. R. Geoscience 335 (2003).     

Geographic structure of European anchovy: A nuclear-DNA study

Atlantic–Mediterranean anchovies were genetically characterized at two polymorphic nuclear loci (intron 6 of two creatine-kinase genes) and compared to reference Engraulis albidus and E. encrasicolus samples from the northern Western Mediterranean to provide new insights into their geographic structure. Northeastern Atlantic anchovy, represented by one sample from the Canary archipelago and one sample from the Alboran Sea, were genetically distinct from Mediterranean E. encrasicolus (Weir and Cockerham's ^θ = 0.027–0.311), indicating geographic isolation from either side of the Almería–Oran oceanographic front. Generally smaller genetic differences were evident among anchovy populations from different sub-basins in the Mediterranean (^θ = − 0.019–0.116), the genetic differences between Black Sea and Ionian Sea/Aegean Sea anchovies being the strongest (^θ = 0.002–0.116). There was no evidence of the presence of E. albidus in our samples outside Camargue (northern shore of the Western Mediterranean). However, a sample from the southern Western Mediterranean appeared to be genetically intermediate between E. albidus and Mediterranean E. encrasicolus, indicating possible hybridization. Anchovy from the Benguela current system off southern Africa possessed allele frequencies characteristic of E. albidus at one locus and Northeastern Atlantic anchovy at the other locus, suggesting past introgression.     

Importance of the oxidation/maturation pair in the evolution of humic coals

The natural thermal evolution of type III coals (Humic origin) is expressed during diagenesis by a loss of oxygen as CO₂ and H₂O. Other phenomena such as oxidation can cause extensive geochemical modifications and may complicate the effects of simple maturation.Humic coals from the Jurassic in southeastern Utah were studied by elemental analysis, Rock-Eval pyrolysis and infrared spectroscopy. In a van Krevelen diagram (atomic H/C vs atomic O/C), the samples fall within the envelope defined by 860 reference humic coals covering the entire range of diagenesis. Nevertheless, various criteria (geochemical, petrographic, geological and microscopic) cast doubt upon the interpretation that such a distribution of coal composition results from thermal maturation.The same criteria indicate the intervention of redox phenomena. Comparison of our results with those from artificial and natural oxidation shows that these coals were subjected to an oxidation process different from ordinary late alteration. This process was probably due to circulation of highly oxidizing saline water causing oxygen fixation and the transformation of carboxyls into carboxylate anions. The cations that were fixed are oxygenated and certainly contain calcium, but also uranium and perhaps several other cations (V, Mo, Fe...). Emphasis is placed on possible mechanisms that cause such phenomena.     

DEVEX-disdrometer evaluation experiment: Basic results and implications for hydrologic studies

Increasing our understanding of the small scale variability of drop size distributions (DSD), and therefore of several bulk characteristics of rainfall processes, has major implications for our interpretation of the remote sensing based estimates of precipitation and its uncertainty. During the spring and summer of 2002 the authors conducted the DEVEX experiment (disdrometer evaluation experiment) to compare measurements of natural rain made with three different types of disdrometers collocated at the Iowa City Municipal Airport in Iowa City, Iowa in the Midwestern United States. This paper focuses on the evaluation of the instruments rather than analysis of the hydrometeorological aspects of the observed events. The comparison demonstrates discrepancies between instruments. The authors discuss the systematic and random effects in terms of rainfall quantities, drop size distribution properties, and the observed drop size vs. velocity relationships. Since the instruments were collocated, the effects of the natural variability of rain are reduced some with time integration, isolating the instrumental differences. The authors discuss the status of DSD measurement technologies and the implications for a range of hydrologic applications from remote sensing of rainfall to atmospheric deposition to soil erosion and sediment transport in the environment. The data set collected during the DEVEX experiment is made available to the research community.     

Phytolith assemblages as a promising tool for reconstructing Mediterranean Holocene vegetation

The reliability of phytolith assemblage analysis for characterizing Mediterranean vegetation is investigated in this study. Phytolith assemblages are extracted from modern and buried Holocene soils from the middle Rhône valley (France). The relation between modern phytolith assemblages and the surrounding vegetation, as well as between fossil assemblages and contemporaneous vegetation, already reconstructed through other proxies, is discussed. We demonstrate that the main northwestern Mediterranean biomes are well distinguished by soil phytolith assemblage analysis. In particular, the density of pine and nonconiferous trees (densities expressed relatively to the grass cover) and the overall degree of opening of the vegetation appear well recorded by three phytolith indexes. North Mediterranean vegetation changes during the Holocene period, mainly tree line shifts, pine wood development and deforestation are poorly documented, due to the scarcity of proxy-preserving sites. Phytolith assemblage analysis of soils, buried soils, and sediments appears to be a promising technique to fill this gap.     

Observations and predictions of hydromechanical coupling effects in the Boom clay,Mol Underground Research Laboratory,Belgium

The Boom clay is considered as a candidate host rock for the Belgian disposal of radioactive waste. Thanks to the recent sinking of a new shaft to extend the Underground Research Laboratory (URL) at the Mol site, new in-situ data have been obtained. They consist in the observation of significant fracturing, evidenced during the excavation of the shaft annexes, and in correlated hydraulic perturbations in the far field (maximum of 0.2 MPa at 60-m radius). These observations cannot be explained from simple poroplastic models that predict a maximum perturbation extent of 25 m under full deconfinement. Thus, models with increasing complexity are built to explain this discrepancy. It is proposed that the low-support pressure imposed by the primary lining, combined with the long time over which this support condition held, has favoured the decompression of the clay massif through time-dependent effects, mainly skeleton viscosity. This resulted in near-field fracturing, leading to an apparent increase of the excavated radius and to a hydraulic perturbation in the far field. This interpretation still needs to be validated/invalidated with future research. The effect on the overall performance of the repository is expected to remain small due to the self-healing nature of the fractures. Electronic Publication     

Surface chemistry and reactivity of plant phytoliths in aqueous solutions

In order to better understand the reactivity of plant phytoliths in soil solutions, we determined the solubility, surface properties (electrophoretic mobilities and surface charge) and dissolution kinetics of phytoliths extracted from fresh biomass of representative plant species (larch tree and elm, horsetail, fern, and four grasses) containing significant amount of biogenic silica. The solubility product of larch, horsetail, elm and fern phytoliths is close to that of amorphous silica and soil bamboo phytoliths. Electrophoretic measurements yield isoelectric point pH_IEP = 0.9, 1.1, 2.0 and 2.2 for four grasses, elm, larch and horsetail phytoliths respectively, which is very close to that of quartz or amorphous silica. Surface acid–base titrations allowed generation of a 2-pK surface complexation model (SCM) for larch, elm and horsetail phytoliths. Phytoliths dissolution rates, measured in mixed-flow reactors at far from equilibrium conditions at 1 ≤ pH ≤ 8, were found to be very similar among the species, and close to those of soil bamboo phytoliths. Mechanistic treatment of all plant phytoliths dissolution rates provided three-parameters equation sufficient to describe phytoliths reactivity in aqueous solutions:$R(\text{mol}/{\text{cm}}^2/\text{s})=6?{10}^{?16}?a_{\text{H+}}+5.0?{10}^{?18}+3.5?{10}^{?13}?a_{\text{OH}?}^{0.33}$Alternatively, the dissolution rate dependence on pH can be modeled within the concept of surface coordination theory assuming the rate proportional to concentration of > SiOH₂⁺, > SiOH⁰ and > SiO^? species. In the range of Al concentration from 20 to 5000 ppm in the phytoliths, we have not observed any correlation between their Al content and solubility, surface acid–base properties and dissolution kinetics.It follows from the results of this study that phytoliths dissolution rates exhibit a minimum at pH ～ 3. Mass-normalized dissolution rates are similar among all four types of plant species studied and these rates are an order of magnitude higher than those of typical soil clay minerals. The minimal half life time of larch and horsetail phytoliths in the interstitial soil solution ranges from 10–12 years at pH = 2–3 to < 1 year at pH above 6, comparable with mean residence time of phytoliths in soil from natural observations.     

Recruitment patterns of young-of-the-year mugilid fishes in a West African estuary impacted by climate change

With the persistence of the sub-Saharan drought since the 1970s, the Sine Saloum estuary (Senegal) – the second largest coastal Biosphere Reserve of West-Africa – has become an “inverse estuary” and hypersaline (salinity > 60) in its upstream part. A one-year survey was conducted from April 2007 to March 2008 at eight sites distributed along the salinity gradient, to investigate the recruitment patterns of young-of-the-year mugilids in such an impacted ecosystem. Fishes were sampled monthly with a conical net and a beach seine in salinities ranging from 31 to 104. Samples were identified to the species level. For the smallest individuals (<20 mm SL) a PCR–RFLP technique, developed on the mitochondrial 16S ribosomal RNA region, was used for identification. A total of 8438 juveniles belonging to six of the eight species of mugilids known for the tropical Eastern Atlantic were collected: Mugil bananensis, Mugil cephalus, Mugil curema, Liza dumerili, Liza falcipinnis and Liza grandisquamis. One species, L. dumerili, represented 89% of the total catch. Length–frequency distributions revealed that M. cephalus and L. dumerili preferentially recruited during the dry season whereas the recruitment of M. curema, M. bananensis and L. falcipinnis generally occurred during the wet season. Minimal size at recruitment ranged from 9 to 19 mm SL depending on the species, the smallest size being that of L. dumerili. Despite the general salinity increase in the estuary, most parts of the Sine Saloum were suitable for the juveniles. Only the hypersaline area in the uppermost part of the estuary presented very low fish abundance for all species. According to the species, small recruits (12–20 mm SL) were collected at salinities up to 47–78, suggesting that osmoregulatory capacities had been gained early during ontogenesis, possibly resulting from an adaptation of these populations to changing environmental conditions.     

Salinity-related variation in gene expression in wild populations of the black-chinned tilapia from various West African coastal marine,estuarine and freshwater habitats

This study measured the relative expression of the genes coding for Na⁺, K⁺-ATPase 1α(NAKA), voltage-dependent anion channel (VDAC), cytochrome c oxidase-1 (COX), and NADH dehydrogenase (NDH), in gills of six wild populations of a West African tilapia species, acclimatised to a range of seasonal (rainy or dry) salinities in coastal, estuarine and freshwater sites. Previous laboratory experiments have demonstrated that these genes, involved in active ion transport, oxidative phosphorylation, and intra-cellular ATP transport, are relatively over-expressed in gill tissues of this species acclimated to high salinity. Positive correlations between relative expression and ambient salinity were found for all genes in the wild populations (Spearman rank correlation, p < 0.05), although for some genes these were only significant in either the rainy season or dry season. Most significantly, however, relative expression was positively correlated amongst the four genes, indicating that they are functionally interrelated in adaptation of Sarotherodon melanotheron to salinity variations in its natural environment. In the rainy season, when salinity was unstable and ranged between zero and 37 psu across the sites, overall mean expression of the genes was higher than in the dry season, which may have reflected more variable particularly sudden fluctuations in salinity and poorer overall water quality. In the dry season, when the salinity is more stable but ranged between zero and 100 psu across the sites, NAKA, NDH and VDAC expression revealed U-shaped relationships with lowest relative expression at salinities approaching seawater, between 25 and 45 psu. Although it is not simple to establish direct relationship between gene expression levels and energy requirement for osmoregulation, these results may indicate that costs of adaptation to salinity are lowest in seawater, the natural environment of this species. While S. melanotheron can colonise environments with extremely high salinities, up to 100 psu, this was related to high relative expression for all genes studied, indicating that this imposes increased energy demand for osmotic homeostasis in gill tissues. This study is the first to demonstrate, in fish and in wild populations, that expression of NAKA, VDAC, NDH and COX are interrelated in gill tissues, and are involved in long-term acclimatisation to a salinity range between 0 and 100 psu.