Microbial Diversity in Nankai Trough Sediments at a Depth of 3,843 m

Dense populations of bivalves, primarily Calyptogena sp., were observed at cold seeps of the Nankai Trough. Bacterial input to the sediment was estimated through determination of phospholipid ester-linked fatty acid (PLFA) and DNA profiles. Results indicated a bacterial biomass of 10⁹ cells (g dry wt)^-1 while individual fatty acid profiles revealed a predominance of monounsaturated fatty acids, mainly 18:1 isomers. The presence of these fatty acids can be interpreted to reflect a response to low temperature and a predominance of psychrophilic bacteria. DNA fragments encoding bacterial ribosomal RNA small-subunit sequences (16S rDNA) were amplified by the polymerase chain reaction method using DNA extracted directly from the sediment samples. From the sequencing results, at least 19 kinds of bacterial 16S rDNAs related to mostly the Proteobacteria and a few gram-positive bacteria were identified. These results suggest that the bacterial community in the Nankai Trough sediments consists of mainly bacteria belonging to the Proteobacteria , , and subdivisions. Bacteria belonging to the and subdivisions, which are known to include epibiont and sulfate reducing bacteria, respectively, were mostly detected in the sediment obtained from inside the area of the Calyptogena community, and the -Proteobacteria may function to supply reduced sulfur to bacterial endosymbionts of Calyptogena.     

Relative abundance, age, growth, and fecundity of grubby Myoxocephalus aenaeus in Niantic River and Niantic Bay, Long Island Sound

Grubby (Myoxocephalus aenaeus, Cottidae) is a common benthic fish of inshore waters and estuaries of eastern Long Island Sound; however, little information exists on their life history or population demographics. This study utilised a long-term data series (1976–2002) to assess grubby life history and population demographics and explores trends in the Niantic River and Niantic Bay populations. In addition, we examined the age, size, and fecundity of adult grubby in 2001–02 to determine the population characteristics in the region. Mean grubby catch per unit effort (CPUE) in Niantic Bay ranged from 0.4 per trawl in 1976 to 2.9 per trawl in 1984 while river CPUE ranged from 0.4 per trawl in 1977 to 7.6 per trawl in 1989. Catch of grubby in bottom trawls varied seasonally with highest CPUE occurring in winter. Highest entrainment of grubby larvae occurred in 2001 while the lowest entrainment observed was in 1991. Four age classes, 0+ through III+, were derived from otolith analysis (N = 51) although length frequency analysis suggested the possibility of older fish in the population. The total number of eggs in ovaries ranged from 286 to 16 451 for grubby (N = 64) between 52 mm and 155 mm TL. Results of this study indicated a decline in abundance of adult grubby over the 26-year period, possibly related to concurrent declines in eelgrass (Zostera marina) abundance and/or increased water temperature.     

Water quality impacts from mining in the Black Hills,South Dakota,USA

The focus of this research was to determine if abandoned mines constitute a major environmental hazard in the Black Hills. Many abandoned gold mines in the Black Hills contribute acid and heavy metals to streams. In some areas of sulfide mineralization local impacts are severe, but in most areas the impacts are small because most ore deposits consist of small quartz veins with few sulfides. Pegmatite mines appear to have negligible effects on water due to the insoluble nature of pegmatite minerals. Uranium mines in the southern Black Hills contribute some radioactivity to surface water, but the impact is limited because of the dry climate and lack of runoff in that area.     

Magnetosheath Interaction with the High Latitude Magnetopause

We present both statistical and case studies of magnetosheath interaction with the high-latitude magnetopause on the basis of Interball-1 and other ISTP spacecraft data. We discuss those data along with recently published results on the topology of cusp-magnetosheath transition and the roles of nonlinear disturbances in mass and energy transfer across the high-latitude magnetopause. For sunward dipole tilts, a cusp throat is magnetically open for direct interaction with the incident flow that results in the creation of a turbulent boundary layer (TBL) over an indented magnetopause and downstream of the cusp. For antisunward tilts, the cusp throat is closed by a smooth magnetopause; demagnetized ‘plasma balls’ (with scale ∼ few R_E, an occurrence rate of ∼25% and trapped energetic particles) present a major magnetosheath plasma channel just inside the cusp. The flow interacts with the ‘plasma balls’ via reflected waves, which trigger a chaotization of up to 40% of the upstream kinetic energy. These waves propagate upstream of the TBL and initiate amplification of the existing magnetosheath waves and their cascade-like decays during downstream passage throughout the TBL. The most striking feature of the nonlinear interaction is the appearance of magnetosonic jets, accelerated up to an Alfvenic Mach number of 3. The characteristic impulsive local momentum loss is followed by decelerated Alfvenic flows and modulated by the TBL waves; momentum balance is conserved only on time scales of the Alfvenic flows (1/f_A ∼12 min). Wave trains at f_A∼1.3 mHz are capable of synchronizing interactions throughout the outer and inner boundary layers. The sonic/Alfvenic flows, bounded by current sheets, control the TBL spectral shape and result in non-Gaussian statistical characteristics of the disturbances, indicating the fluctuation intermittency. We suggest that the multi-scale TBL processes play at least a comparable role to that of macro-reconnection (remote from or in the cusp) in solar wind energy transformation and population of the magnetosphere by the magnetosheath plasma. Secondary micro-reconnection constitutes a necessary chain at the small-scale (∼ion gyroradius) edge of the TBL cascades. The thick TBL transforms the flow energy, including deceleration and heating of the flow in the open throat, ‘plasma ball’ and the region downstream of the cusp.     

Effects of hopper dredging and sediment dispersion,chesapeake bay

Hopper dredging operations release suspended sediment into the environment by agitation of the bed and by discharge of overflow slurries. Monitoring of turbidity and suspended sediment concentrations in central Chesapeake Bay revealed two plumes: (1) an upper plume produced by overflow discharge and (2) a near-bottom plume produced by draghead agitation and rapid settling from the upper plume. The upper plume dispersed over 5.7 km² extending 5,200 meters form the discharge point. Redeposited sediment accumulated on channel flanks covering an area of 6.4 km² and reached a thickness of 19 cm. Altogether dredging redistributed into the environment an estimated 100,000 tons of sediment or 12 percent of the total material removed.Near-field concentrations of suspended sediment, less than 300 m from the dredge, reach 840 to 7,200 mg/L or 50 to 400 times the normal background level. Far-field concentrations (>300 m) are enriched 5 to 8 times background concentrations and persist 34 to 50 percent of the time during a dredging cycle (1.5 to 2.0 h). The overflow discharge plume evolves through three dispersion phases: (1) convective descent, (2) dynamic collapse, and (3) long-term passive diffusion (Clark and others 1971). The bulk of the material descends rapidly to the bottom during the convective descent phase, whereas the cloud that remains in suspension is dispersed partly by internal waves. Although suspended sediment concentrations in the water column exceed certain water quality standards, benthic communities survived the perturbation with little effect.