Fast genetic mapping in barley: case studies of cuticle mutants using RNA-sequencing

Barley(Hordeum vulgare L.) is one of the earliest domesticated crop species and ranked as the fourth largest cereal production worldwide. Forward genetic studies in barley have greatly advanced plant genetics during the last century; however, most genes are identified by the conventional mapping method. Array genotyping and exome-capture sequencing have also been successfully used to target the causal mutation in barley populations, but these techniques are not widely adopted because of associated costs and partly due to the huge genome size of barley. This review summarizes three mapping cases of barley cuticle mutants in our laboratory with the help of RNA-sequencing. The causal mutations have been successfully identified for two of them and the target genes are located in the pericentromeric regions. Detailed information on the mapping-by-sequencing, mapping-and-sequencing, and RNA-sequencing assisted linkage mapping are presented and some limitations and challenges on the mapping assisted by RNA sequencing are also discussed. The alternative and elegant methods presented in this review may greatly accelerate forward genetics of barley mapping, especially for laboratories without large funding.     

观驾山—黑岛一带信息量法找金研究

本文以成矿地质模型为依据，对观驾山—黑山岛一带的化探、物探、遥感及地质等信息变量进行了详细的分析，选取了１０个信息变量２４个标志状态；在此基础上，运用信息量法对研究区内４５８个单元的信息量值进行计算，并由此确定了研究范围内的成矿远景区。事实表明，研究区信息量成矿预测是非常有效的     

Microwave Type III Burst Group in the 1993 October 2 Flare

Microwave Type III bursts with positive frequency drifting rate were found by Stahli and Benz (1987) for first time. Type III events are especially interesting because they are well-known to be signatures of electron beams in coronal plasma, and they are effective means for diagnosting of source plasma. A microwave burst consisting of some microwave type III burst groups was registered at Beijing Astronomical Observatory with the 2545–2645–2840 MHz synchronous observing system. The distributions of frequency drifting rate, half power duration, and intensity for each impulse in the groups have been statistically analysed. From this analysis, some important parameters for the dynamic process in the flare are deduced and discussed.     

桐柏─大别山北麓金矿带地质物化探找矿模型

从桐柏─大别山成矿带区域地质、地球物理、地球化学特征的研究入手，分析与金成矿有关的地层、构造、岩浆岩等控矿因素的地球物理场及地球化学特征；建立区域金矿找矿模型。     

洛坝铅锌矿床的构造演化分析

洛坝铅锌矿床位于黄诸关韧脆性变形带所波及的范围内,断裂、褶皱、劈理、节理等形态构造类型均很发育,经对小型构造的统计及应力场分析证明,矿区变形主要是在海西—印支期长期存在的南北向古应力场持续作用下形成的。     

描述地壳垂直运动过程的一种函数形式

本文在已有数据处理方法的基础上，利用近代数值逼近理论，给出了从时空域角度描述地壳垂直运动过程的一种具体的函数解析形式。最后给出了一个实际算例。     

Seasonal and annual variation of CO2 flux above a broad-leaved Korean pine mixed forest

Long-term measurement of carbon metabolism of old-growth forests is critical to predict their behaviors and to reduce the uncertainties of carbon accounting under changing climate. Eddy covariance technology was applied to investigate the long-term carbon exchange over a 200 year-old Chinese broad-leaved Korean pine mixed forest in the Changbai Mountains (128°28′E and 42°24′N, Jilin Province, P. R. China) since August 2002. On the data obtained with open-path eddy covariance system and CO₂ profile measurement system from Jan. 2003 to Dec. 2004, this paper reports (i) annual and seasonal variation of F _NEE, F _GPP and R _E; (ii) regulation of environmental factors on phase and amplitude of ecosystem CO₂ uptake and release Corrections due to storage and friction velocity were applied to the eddy carbon flux.

L_AI and soil temperature determined the seasonal and annual dynamics of F_GPP and R_E separately. V_PD and air temperature regulated ecosystem photosynthesis at finer scales in growing seasons. Water condition at the root zone exerted a significant influence on ecosystem maintenance carbon metabolism of this forest in winter.

The forest was a net sink of atmospheric CO₂ and sequestered −449 g C·m⁻² during the study period; −278 and −171 gC·m⁻² for 2003 and 2004 respectively. F _GPP and F _RE over 2003 and 2004 were −1332, −1294 g C·m⁻². and 1054, 1124 g C·m⁻² respectively. This study shows that old-growth forest can be a strong net carbon sink of atmospheric CO₂.

There was significant seasonal and annual variation in carbon metabolism. In winter, there was weak photosynthesis while the ecosystem emitted CO₂. Carbon exchanges were active in spring and fall but contributed little to carbon sequestration on an annual scale. The summer is the most significant season as far as ecosystem carbon balance is concerned. The 90 days of summer contributed 66.9, 68.9% of F _GPP, and 60.4, 62.1% of R _E of the entire year.

     

BACKGROUND STUDY ON NON-RESIDUAL PHASE OF ELEMENTS IN CHANGJIANG AND HUANGHE ESTUARINE SEDIMENTS

Analysis of Zn, Cu, Pb, Co, Cr, Li, Ni, K, Al, Fe extracted by 1 mol/L HCl or 0.5 mol/LHCl/H_2O_2, showed concentrations of Zn, Cu, Pb, Co, Cr, Fe, Ni were significantly correlated with Li, Al,K, and clay. Two methods are used to indicate the background value of the non-residual phase of elementsin sediments, and are the same as the methods used to indicate the background value of totalconcentrations in sediments. The first method uses correlograms and regression equations,the second usesthe mean element concentrations normalized with grain size. Li, Al, K can be used as reference elements to determine the background value of Zn, Cu, Pb, Co,Cr, Ni, Fe, while the clay concentration's correlation with some extractable concentrations can be used tocalculate the background value of the non-residual phase of elements as a percentage of clay concentrationin the sediments. Based on this study, the concept of using the background value of the non-residualphase of elements to compare the pollution level in differ