Numerical study of enhanced energy dissipation near a seamount

Using a two-dimensional primitive equation model, we examine nonlinear responses of a semidiurnal tidal flow impinging on a seamount with a background Garrett-Munk-like (GM-like) internal wavefield. It is found that horizontally elongated pancake-like structures of high vertical wavenumber near-inertial current shear are created both in the near-field (the region over the slope of the seamount) and far-field (the region over the flat bottom of the ocean). An important distinction is that the high vertical wavenumber near-inertial current shear is amplified only at mid-latitudes in the far-field (owing to a parametric subharmonic instability (PSI)), whereas it is amplified both at mid-and high-latitudes (above the latitude where PSI can occur) in the near-field. In order to clarify the generating mechanism for the strong shear in the near-field, additional numerical experiments are carried out with the GM-like background internal waves removed. The experiments show that the strong shear is also created, indicating that it is not caused by the interaction between the background GM-like internal waves and the semidiurnal internal tides. One possible explanation is proposed for the amplification of high vertical wavenumber near-inertial current shear in the near-field where tide residual flow resulting from tide-topography interaction plays an important role in transferring energy from high-mode internal tides to near-inertial internal waves.     

Numerical study of the meridional overturning circulation with “mixing hotspots” in the Pacific Ocean

Using an idealized ocean general circulation model, we examine the effect of “mixing hotspots” (localized regions of intense diapycnal mixing) predicted based on internal wave-wave interaction theory (Hibiya et al., 2006) on the meridional overturning circulation of the Pacific Ocean. Although the assumed diapycnal diffusivity in the mixing hotspots is a little larger than the predicted value, the upwelling in the mixing hotspots is not sufficient to balance the deep-water production; out of 17 Sv of the downwelled water along the southern boundary, only 9.2 Sv is found to upwell in the mixing hotspots. The imbalance as much as 7.8 Sv is compensated by entrainment into the surface mixed layer in the vicinity of the downwelling region. As a result, the northward transport of the deep water crossing the equator is limited to 5.5 Sv, much less than estimated from previous current meter moorings and hydrographic surveys. One plausible explanation for this is that the magnitude of the meridional overturning circulation of the Pacific Ocean has been overestimated by these observations. We raise doubts about the validity of the previous ocean general circulation models where diapycnal diffusivity is assigned ad hoc to attain the current magnitude suggested from current meter moorings and hydrographic surveys.     

Seepage and consolidation of bentonite saturated with pure- or salt-water by the method of unified molecular dynamics and homogenization analysis

Bentonite clay is a micro-inhomogeneous material, which consists of clay minerals (mainly montmorillonite), macro-grains (mainly quartz), water, air and others. Properties of the saturated bentonite clay are essentially characterized by the montmorillonite and water (i.e. montmorillonite hydrate). We analyze the molecular behavior of sodium montmorillonite hydrate Na_1/3Al₂[Si_11/3Al_1/3]O₁₀(OH)₂·nH₂O by applying a molecular dynamics (MD) simulation method. And by using the MD results we calculate the swelling property of the montmorillonite hydrate, and compare with an experimental result. Next, by using the same MD procedure we treat a montmorillonite mineral with a large number of external water molecules to check the properties of the water. Here we treat pure- and salt-water. Then we calculate the diffusivity and viscosity of water molecules and Na⁺ and Cl⁻ ions.

For extending the microscopic characteristics of constituent materials to a macroscopic seepage behavior of the micro-inhomogeneous material we apply a homogenization analysis (HA). That is, starting with the Navier–Stokes equation with distributed viscosity that is calculated by the former MD procedure we determine macroscopic permeability characteristics of bentonite for both cases of pure- and salt-water. Then, by using the permeability property we calculate long-term consolidation behavior of buffering clay, which is planed to be used for high-level radioactive waste (HLRW) management. Here the deformation is treated under the well-defined Cam clay model.     

Vegetation and climate variability in East Asia driven by low-latitude oceanic forcing during the middle to late Holocene

At centennial to millennial timescales, little is known of C₃ and C₄ plant productivity’s responses to past regional climate changes and the dominant forcing factors during the Holocene, although large-scale changes in glacial-interglacial periods have been attributed to changes in aridity, temperature, and CO₂ concentration. We investigated the δ¹³C of TOC, C/N ratios, and pollen in samples from a wetland on Jeju Island, Korea. The bulk isotopic signal ranging from ?17‰ to ?29‰ was partitioned into C₃ and C₄ plant signals by using a binary mixing model and calculating separate organic carbon-accumulation rates for C₃ and C₄ plants (OCAR₃ and OCAR₄) during the last 6500 years. Pollen data indicated that the temperate deciduous broadleaved trees replaced grassland dominated by Artemisia, dry-tolerant grass, and further expanded in the maar. The long-term decreasing trend of Artemisia-dominated grassland was similar to those of δ¹³C values and OCAR₄. The multi-centennial to millennial variability superimposed on the gradual increasing trend of OCAR₃ was inversely correlated with those of the sea surface temperature (SST) in the western tropical Pacific (WTP) and El Niño-Southern Oscillation (ENSO) activity, suggesting that C₃ plants have stronger sensitivity to regional climate change driven by oceanic forcing. Our data suggest that vegetation changes in a coastal area in East Asia were affected by monsoonal changes coupled with SST in WTP and ENSO activity. The vegetation change on Jeju Island varied quite differently from change in the westerly pathway, suggesting only a weak influence from high-latitude-driven atmospheric circulation changes. We conclude that centennial- to millennial-scale climate changes in coastal regions of East Asia during the mid- to late-Holocene may have been mainly controlled by low-latitudinal oceanic forcing, including forcing by SST and ENSO activity.     

Geochemical study of the redistribution of elements in soil—I. Evaluation of degree of weathering of transported soil materials by distribution of major elements among the particle size fractions and soil extract

Sixteen alluvial and terrace soils from Japan and Thailand were separated into six fractions ; an amorphous sesquioxide and combined organic matter fraction, crystalline sesquioxides, clay, silt, fine sand and coarse sand. Content of ten major and minor elements in these six fractions was analyzed; SiO₂, A1₂O₃, Fe₂O₃, MgO, CaO, K₂O, TiO₂, Rb₂O and SrO were determined by X-ray fluorescence spectrometry, and Na₂O was determined by neutron activation analysis. The clay, silt, fine sand and coarse sand mineralogy were estimated semi-quantitatively by X-ray diffraction methods.We propose three indices of geochemical maturity for the soils and test their usefulness as measures of the degree of weathering. Three concomitant factors are proposed to measure the relative resistate, hydrolyzate and oxidate nature of the major elements in the soils.     

Ab initio calculations of the Fe(II) and Fe(III) isotopic effects in citrates,nicotianamine, and phytosiderophore,and new Fe isotopic measurements in higher plants

Iron is one of the most abundant transition metal in higher plants and variations in its isotopic compositions can be used to trace its utilization. In order to better understand the effect of plant-induced isotopic fractionation on the global Fe cycling, we have estimated by quantum chemical calculations the magnitude of the isotopic fractionation between different Fe species relevant to the transport and storage of Fe in higher plants: Fe(II)-citrate, Fe(III)-citrate, Fe(II)-nicotianamine, and Fe(III)-phytosiderophore. The ab initio calculations show firstly, that Fe(II)-nicotianamine is ～3‰ (⁵⁶Fe/⁵⁴Fe) isotopically lighter than Fe(III)-phytosiderophore; secondly, even in the absence of redox changes of Fe, change in the speciation alone can create up to ～1.5‰ isotopic fractionation. For example, Fe(III)-phytosiderophore is up to 1.5‰ heavier than Fe(III)-citrate₂ and Fe(II)-nicotianamine is up to 1‰ heavier than Fe(II)-citrate. In addition, in order to better understand the Fe isotopic fractionation between different plant components, we have analyzed the iron isotopic composition of different organs (roots, seeds, germinated seeds, leaves and stems) from six species of higher plants: the dicot lentil (Lens culinaris), and the graminaceous monocots Virginia wild rye (Elymus virginicus), Johnsongrass (Sorghum halepense), Kentucky bluegrass (Poa pratensis), river oat (Uniola latifolia), and Indian goosegrass (Eleusine indica). The calculations may explain that the roots of strategy-II plants (Fe(III)-phytosiderophore) are isotopically heavier (by about 1‰ for the δ⁵⁶Fe) than the upper parts of the plants (Fe transported as Fe(III)-citrate in the xylem or Fe(II)-nicotianamine in the phloem). In addition, we suggest that the isotopic variations observed between younger and older leaves could be explained by mixing of Fe received from the xylem and the phloem.     

Spatio-temporal analysis of recent groundwater-level trends in the Red River Delta, Vietnam

A groundwater-monitoring network has been in operation in the Red River Delta, Vietnam, since 1995. Trends in groundwater level (1995?C2009) in 57 wells in the Holocene unconfined aquifer and 63 wells in the Pleistocene confined aquifer were determined by applying the non-parametric Mann-Kendall trend test and Sen??s slope estimator. At each well, 17 time series (e.g. annual, seasonal, monthly), computed from the original data, were analyzed. Analysis of the annual groundwater-level means revealed that 35?% of the wells in the unconfined aquifer showed downward trends, while about 21?% showed upward trends. On the other hand, confined-aquifer groundwater levels experienced downward trends in almost all locations. Spatial distributions of trends indicated that the strongly declining trends (>0.3?m/year) were mainly found in urban areas around Hanoi where there is intensive abstraction of groundwater. Although the trend results for most of the 17 time series at a given well were quite similar, different trend patterns were detected in several. The findings reflect unsustainable groundwater development and the importance of maintaining groundwater monitoring and a database in the Delta, particularly in urban areas.     

Vertical mixing in the bottom mixed layer near the continental shelf break in the East China Sea

The strength of the vertical mixing in the bottom mixed layer near the continental shelf break in the East China Sea was directly measured with the Micro-Scale Profiler (MSP). It has been shown that there is no significant statistical relation between the turbulent energy dissipation and the degree of the stratificationN ². It seems that the vigorous turbulence occurs not constantly but intermittently in the bottom mixed layer so that a large variation of is found depending on the time. In contrast to , the coefficient of the vertical eddy diffusivityK _z is mostly determined byN such thatK _z is large in the bottom mixed layer and small in the thermocline. Large value ofK _z in the bottom mixed layer is also found in the time series ofK _z estimated in terms of Richardson number calculated from the data obtained with electromagnetic current meters. The value ofK _z more than 10 cm²s^–1 frequently occur in the layer of 20–25 m thick just above the bottom.     

The Formation and Circulation of the Intermediate Water in the Japan Sea

In order to clarify the formation and circulation of the Japan/East Sea Intermediate Water (JESIW) and the Upper portion of the Japan Sea Proper Water (UJSPW), numerical experiments have been carried out using a 3-D ocean circulation model. The UJSPW is formed in the region southeast off Vladivostok between 41°N and 42°N west of 136°E. Taking the coastal orography near Vladivostok into account, the formation of the UJSPW results from the deep water convection in winter which is generated by the orchestration of fresh water supplied from the Amur River and saline water from the Tsushima Warm Current under very cold conditions. The UJSPW formed is advected by the current at depth near the bottom of the convection and penetrates into the layer below the JESIW. The origin of the JESIW is the low salinity coastal water along the Russian coast originated by the fresh water from the Amur River. The coastal low salinity water is advected by the current system in the northwestern Japan Sea and penetrates into the subsurface below the Tsushima Warm Current region forming a subsurface salinity minimum layer. This revised version was published online in August 2006 with corrections to the Cover Date.