Diurnal variability in turbidity and coral fluorescence on a fringing reef flat: Southern Molokai,Hawaii

Terrigenous sediment in the nearshore environment can pose both acute and chronic stresses to coral reefs. The reef flat off southern Molokai, Hawaii, typically experiences daily turbidity events, in which trade winds and tides combine to resuspend terrigenous sediment and transport it alongshore. These chronic turbidity events could play a role in restricting coral distribution on the reef flat by reducing the light available for photosynthesis. This study describes the effects of these turbidity events on the Hawaiian reef coral Montipora capitata using in situ diurnal measurements of turbidity, light levels, and chlorophyll fluorescence yield via pulse-amplitude-modulated (PAM) fluorometry. Average surface irradiance was similar in the morning and the afternoon, while increased afternoon turbidity resulted in lower subsurface irradiance, higher fluorescence yield (ΔF/F_m^′), and lower relative electron transport rates (rETR). Model calculations based on observed light extinction coeffecients suggest that in the absence of turbidity events, afternoon subsurface irradiances would be 1.43 times higher than observed, resulting in rETR for M. capitata that are 1.40 times higher.     

Macroparasites of angelfish Brama brama (Bonnaterre, 1788) in the southern Benguela Current ecosystem

The angelfish Brama brama is a mesopelagic species distributed circumglobally in temperate to warm-temperate waters, including continental-shelf-edge and upper-slope waters of the Benguela Current ecosystem. Little is known about the parasite assemblage of Benguela B. brama, with only three parasite taxa having previously been documented from this species in the southern Benguela. This study describes the macroparasites recorded from 35 B. brama collected during research surveys off the west coast of South Africa in 2015 and 2016. A total of six macroparasite taxa were documented, including the nematode Anisakis pegreffii, the copepod Hatschekia conifera, the cestode Hepatoxylon trichiuri, an acanthocephalan from the genus Rhadinorhynchus, a monogenean from the family Diclidophoridae, and an unidentified species. Three of these (He. trichiuri, Rhadinorhynchus sp. and the unidentified species) had not previously been found to infect B. brama. The most prevalent macroparasite taxa were A. pegreffii (94%), the unidentified species (71%) and Ha. conifera (60%). Two of the parasites, Ha. conifera and He. trichiuri, showed seasonal variation in infection, and infection with the latter was positively correlated with host length. These findings increase our knowledge of B. brama biology and contribute to our understanding of the biodiversity of the southern Benguela ecosystem.     

Diet and gill morphology of the East Coast redeye round herring Etrumeus wongratanai off KwaZulu-Natal,South Africa

Stomach content analyses and measurements of gillraker morphology were used to assess the diet and feeding ecology of the East Coast redeye round herring Etrumeus wongratanai and provide data for comparisons with other small pelagic fishes off South Africa. Samples were collected by jigging from a kayak off Scottburgh, KwaZulu-Natal (KZN), over the period July 2013–May 2014. In total, 66 stomachs (containing 4 407 prey items) and 66 gill arches were examined. Stomach content analyses indicated that East Coast redeye round herring, at the time of sampling, fed on large (1 500–2 500?µm) particles, with ～2 500?µm particles making the greatest contribution to dietary carbon. The species feeds on larger particles than do anchovy Engraulis encrasicolus and sardine Sardinops sagax, but on particles of a similar size to those consumed by West Coast redeye round herring Etrumeus whiteheadi. There were significant differences in mean gillraker gaps between East Coast redeye round herring and both sardine and anchovy, but not between East Coast and West Coast redeye round herring. The differences in gillraker gaps between East Coast redeye round herring, sardine and anchovy are indicative of resource partitioning through differential feeding, based on zooplankton size. The data suggest that there is no resource partitioning between East and West coast redeye round herring, indicating that competition is likely to occur between them. However, such competition is minimised by limited spatial overlap between these two species.     

Quantity, composition, and source of sediment collected in sediment traps along the fringing coral reef off Molokai, Hawaii

Sediment traps were used to evaluate the frequency, cause, and relative intensity of sediment mobility/resuspension along the fringing coral reef off southern Molokai (February 2000-May 2002). Two storms with high rainfall, floods, and exceptionally high waves resulted in sediment collection rates>1000 times higher than during non-storm periods, primarily because of sediment resuspension by waves. Based on quantity and composition of trapped sediment, floods recharged the reef flat with land-derived sediment, but had a low potential for burying coral on the fore reef when accompanied by high waves. The trapped sediments have low concentrations of anthropogenic metals. The magnetic properties of trapped sediment may provide information about the sources of land-derived sediment reaching the fore reef. The high trapping rate and low sediment cover indicate that coral surfaces on the fore reef are exposed to transient resuspended sediment, and that the traps do not measure net sediment accumulation on the reef surface.     

The influence of El Niño-Southern Oscillation (ENSO) cycles on wave-driven sea-floor sediment mobility along the central California continental margin

Ocean surface waves are the dominant temporally and spatially variable process influencing sea floor sediment resuspension along most continental shelves. Wave-induced sediment mobility on the continental shelf and upper continental slope off central California for different phases of El Niño-Southern Oscillation (ENSO) events was modeled using monthly statistics derived from more than 14 years of concurrent hourly oceanographic and meteorologic data as boundary input for the Delft SWAN wave model, gridded sea floor grain-size data from the usSEABED database, and regional bathymetry. Differences as small as 0.5 m in wave height, 1 s in wave period, and 10° in wave direction, in conjunction with the spatially heterogeneous unconsolidated sea-floor sedimentary cover, result in significant changes in the predicted mobility of continental shelf surficial sediment in the study area. El Niño events result in more frequent mobilization on the inner shelf in the summer and winter than during La Niña events and on the outer shelf and upper slope in the winter months, while La Niña events result in more frequent mobilization on the mid-shelf during spring and summer months than during El Niño events. The timing and patterns of seabed mobility are addressed in context of geologic and biologic processes. By understanding the spatial and temporal variability in the disturbance of the sea floor, scientists can better interpret sedimentary patterns and ecosystem structure, while providing managers and planners an understanding of natural impacts when considering the permitting of offshore activities that disturb the sea floor such as trawling, dredging, and the emplacement of sea-floor engineering structures.     

The relative contribution of processes driving variability in flow, shear, and turbidity over a fringing coral reef: West Maui, Hawaii

High-frequency measurements of waves, currents and water column properties were made on a fringing coral reef off northwest Maui, Hawaii, for 15 months between 2001 and 2003 to aid in understanding the processes governing flow and turbidity over a range of time scales and their contributions to annual budgets. The summer months were characterized by consistent trade winds and small waves, and under these conditions high-frequency internal bores were commonly observed, there was little net flow or turbidity over the fore reef, and over the reef flat net flow was downwind and turbidity was high. When the trade winds waned or the wind direction deviated from the dominant trade wind orientation, strong alongshore flows occurred into the typically dominant wind direction and lower turbidity was observed across the reef. During the winter, when large storm waves impacted the study area, strong offshore flows and high turbidity occurred on the reef flat and over the fore reef. Over the course of a year, trade wind conditions resulted in the greatest net transport of turbid water due to relatively strong currents, moderate overall turbidity, and their frequent occurrence. Throughout the period of study, near-surface current directions over the fore reef varied on average by more than 41° from those near the seafloor, and the orientation of the currents over the reef flat differed on average by more than 65° from those observed over the fore reef. This shear occurred over relatively short vertical (order of meters) and horizontal (order of hundreds of meters) scales, causing material distributed throughout the water column, including the particles in suspension causing the turbidity (e.g. sediment or larvae) and/or dissolved nutrients and contaminants, to be transported in different directions under constant oceanographic and meteorologic forcing.     

再论花岗岩按照Sr-Yb的分类:标志

2006年作者曾经按照Sr=400×10~(-6)和Yb=2×10~(-6)作为标志将花岗岩分为埃达克岩、喜马拉雅型花岗岩、浙闽型花岗岩和广西型花岗岩,在浙闽型中又分出南岭型(Sr100×10~(-6)和Yb2×10~(-6)),于是花岗岩被分为5类。Sr=400×10~(-6)和Yb=2×10~(-6)是根据阿留申群岛中的Adak岛的资料得出来的。本文统计了全球花岗岩6000多个数据(其中,埃达克型花岗岩为2810个,喜马拉雅型花岗岩636个,浙闽型花岗岩1183个,南岭型花岗岩1518个,广西型花岗岩142个,总共6289个),统计的结果,各类花岗岩的地球化学特征大致如下:(1)埃达克型花岗岩富Al_2O_3和Sr,贫Y和Yb,具较高和变化的铕异常,绝大多数样品的Sr300×10~(-6),Yb2.5×10~(-6)(当Sr=400×10~(-6)～600×10~(-6)时Yb值最大,Sr超过600×10~(-6),Yb降低至2×10~(-6)),Al_2O_3在14%～18%之间,Eu/Eu~*大多在0.6～1.2范围;(2)喜马拉雅型花岗岩贫Sr和Yb,具中等的Al_2O_3和变化的Eu/Eu~*,Sr300×10~(-6)和Yb2×10~(-6)(少数Sr300×10~(-6)),Al_2O_3为13%～17%,Eu/Eu~*为0.2～1.0;(3)浙闽型花岗岩贫Sr富Yb,Sr在40×10~(-6)～400×10~(-6)之间,Yb1.5×10~(-6),Al_2O_3和Eu/Eu~*的变化类似喜马拉雅型花岗岩,Al_2O_3为12%～17%,Eu/Eu~*为0.4～1.0;(4)南岭型花岗岩以很低的Sr、Al_2O_3和Eu/Eu~*以及很高的Yb而不同于上述各类花岗岩,通常Yb1.5×10~(-6),Sr100×10~(-6)(Yb变化大,绝大多数2×10~(-6);当Yb在2×10~(-6)～8×10~(-6)时,部分样品Sr可100×10~(-6),但很少200×10~(-6));Al_2O_314%,集中在11%～13%之间,Eu/Eu~*0.7,大多0.4;Yb越大,Sr越低,负铕异常越明显。文中讨论了花岗岩Sr-Yb分类的意义,指出本分类适用于产于大陆和海洋的绝大多数中酸性岩浆岩(可能不适用于一部分特别富铁和钾的花岗岩,如具有高Sr和Yb特征的广西型花岗岩)。不同类型的花岗岩主要反映了源区压力的不同,而源区成分、温度、部分熔融程度、水和挥发分的加入以及岩浆混合等的影响可能是次要的。文中指出,该分类的依据、其实质,是熔体与残留相平衡的理论。与浙闽型花岗岩平衡的残留相是斜长石,与喜马拉雅型花岗岩平衡的是斜长石+石榴石,与埃达克型花岗岩平衡的是石榴石,与南岭型花岗岩平衡的是富钙的斜长石。文中指出,加强实验岩石学研究,将年代学和地球化学研究密切结合起来是深化花岗岩研究的关键。     

Testing for the occurrence of pilchard herpesvirus (PHV) in South African sardine Sardinops sagax

Catches of South African sardine Sardinops sagax have declined in recent years from about 200 000 t harvested annually during the period 2002–2006 to less than 100 000 t. Consequently, some companies are now importing sardine from sources elsewhere in the world to meet local demand for canned sardine and bait. This importation has the potential for the introduction of sardine pathogens, in particular the pilchard herpesvirus (PHV), which could have a negative impact on the currently small South African sardine population. The aims of the current study were to determine whether PHV is present in the local sardine population and to assess the extent to which sardine is being imported into the country and whether imported fish are from countries where the virus is known to be endemic. Fish sampled from South Africa’s western (n = 150), southern (n = 182) and eastern (n = 96) putative stocks of S. sagax were analysed for the presence of PHV using real-time quantitative polymerase chain reaction (qPCR). The origin and amount of potentially infected material imported into South Africa during the period 2010–2014 was also assessed. None of the South African sardine collected during this study tested positive for PHV, suggesting that active PHV was not prevalent in the local population of S. sagax at the time of this study. Between 56 000 and 71 000 t of frozen sardine was imported annually into South Africa from countries where S. sagax occurs, including some from areas (Australia and New Zealand) where sardine infection by PHV is known to be endemic. Hence, it is plausible that the PHV pathogen, capable of perpetuating infections in local sardine populations, could be imported into South Africa along with the importation of frozen sardine. Should local sardine be naïve to the virus, as suggested by this study, then the population is at risk of infection and precautions against such must be taken.     

A comparison of genetic structure in two low-dispersal crabs from the Wild Coast,South Africa

The Wild Coast in south-eastern South Africa is strongly influenced by the warm, southward-flowing Agulhas Current. This current has a significant impact on dispersal in the coastal biota of the region, and facilitates high levels of connectivity among populations. However, it is not known how the region's high-velocity hydrology affects genetic population structure in endemic estuarine species, populations of which are frequently isolated from the sea. Here, we compared genetic structure in two estuarine crabs of the family Hymenosomatidae. Both are presumed to have low dispersal potential, but they differ in terms of their life histories. Hymenosoma longicrure has abbreviated larval development and can complete its entire life cycle within estuaries, whereas Neorhynchoplax bovis is a direct developer that lacks planktonic larvae. Using DNA sequence data from the mitochondrial COI gene and the intron of the nuclear ANT gene, we found that levels of genetic structure differ considerably between the species. Depending on the genetic marker used, H. longicrure is genetically homogeneous (COI) or displays low levels of genetic structure and minor evidence of recruitment near natal sites (ANT). In contrast, connectivity in N. bovis is much lower, as this species has a unique combination of alleles at each site, indicating that recruitment is mostly local. These results support previous findings suggesting that even a short larval dispersal phase is sufficient to maintain high levels of connectivity and prevent genetic divergence among populations.