Measuring species richness on sandy beach transects: extrapolative estimators and their implications for sampling effort

Species richness is a measure that is fundamental to many studies in ecology, and it is particularly important on sandy beaches, where it underlies patterns described by the broadly accepted swash exclusion hypothesis. However, its estimation in practice is problematic. This has led ecologists in other fields to adopt extrapolative estimators of species richness, which project the total number of species present in a habitat by adjusting upward the number of species observed by an amount related to the number of rare species encountered in the samples. In so doing, the species richness can be estimated, with confidence intervals, at any level of sampling effort. Despite the availability and advantages of these methods, beach ecologists have continued to use the observed species richness as a point estimate of biodiversity for beaches. Here, we employ a Monte Carlo resampling approach over a range of routine transect designs used to sample sandy beaches, and evaluate the performance of seven non-parametric extrapolative estimators for species richness relative to that of the more conventionally used observed species richness. We find that the first-order Jackknife estimator (Jack 1) is the least biased, most accurate and most consistent across sites. Employing this estimator would allow accurate estimation of species richness on short (tens of metres) stretches of beach without exceeding the acceptable levels of sampling effort (4–5 m²). Spreading this effort evenly over three across-shore transects, each with a minimum of 13 equally spaced levels seems appropriately efficient. Although a greater number of research studies is required to ascertain the generality of these results beyond the beaches we sampled, we tentatively recommend the application of our results in biodiversity surveys on sandy beaches.     

Bedload transport measurements with impact plate geophones: comparison of sensor calibration in different gravel‐bed streams

Indirect bedload transport measurements have been made with the Swiss plate geophone system in five gravel‐bed mountain streams. These geophone sensors record the motion of bedload particles transported over a steel plate mounted flush with the channel bed. To calibrate the geophone system, direct bedload transport measurements were undertaken simultaneously. At the Erlenbach in Switzerland, a moving‐basket sampler was used. At the Fischbach and Ruetz streams in Austria, a Helley–Smith type bedload sampler provided the calibration measurements. A Bunte‐type bedload trap was used at the Rofenache stream in Austria. At the Nahal Eshtemoa in Israel, Reid‐type slot bedload samplers were used. To characterize the response of the geophone signal to bedload particles impacting on the plate, geophone summary values were calculated from the raw signal and stored at one second intervals. The number of impulses, i.e. the number of peaks above a pre‐defined threshold value of the geophone output signal, correlated well with field measured gravel transport loads and was found to be a robust parameter. The relations of impulses to gravel transport loads were generally near‐linear, but the steepness of the calibration relations differed from site to site. By comparing the calibration measurements from the different field sites and utilizing insights gained during preliminary flume experiments, it has been possible to identify the main factors that are responsible for site specific differences in the calibration coefficient. The analysis of these calibration measurements indicates that the geophone signal also contains some information about the grain size distribution of bedload. Copyright © 2013 John Wiley & Sons, Ltd.     

Mapping beach morphodynamics remotely: A novel application tested on South African sandy shores

Sandy beaches have been identified as threatened ecosystems but despite the need to conserve them, they have been generally overlooked. Systematic conservation planning (SCP) has emerged as an efficient method of selecting areas for conservation priority. However, SCP analyses require digital shapefiles of habitat and species diversity. Mapping these attributes for beaches from field data can take years and requires exhaustive resources. This study thus sought to derive a methodology to classify and map beach morphodynamic types from satellite imagery. Since beach morphodynamics is a strong predictor of macrofauna diversity, they could be considered a good surrogate for mapping beach biodiversity. A dataset was generated for 45 microtidal beaches (of known morphodynamic type) by measuring or coding for several physical characteristics from imagery acquired from Google Earth. Conditional inference trees revealed beach width to be the only factor that significantly predicted beach morphodynamic type, giving four categories: dissipative, dissipative-intermediate, intermediate and reflective. The derived model was tested by using it to predict the morphodynamic type of 28 other beaches of known classification. Model performance was good (75% prediction accuracy) but misclassifications occurred at the three breaks between the four categories. For beaches around these breaks, consideration of surf zone characteristics in addition to beach width ameliorated the misclassifications. The final methodology yielded a 93% prediction accuracy of beach morphodynamic type. Overlaying other considerations on this classification scheme could provide additional value to the layer, such that it also describes species’ spatial patterns. These could include: biogeographic regions, estuarine versus sandy beaches and short versus long beaches. The classification scheme was applied to the South African shoreline as a case study. The distribution of the beach morphodynamic types was partly influenced by geography. Most of the long, dissipative beaches are found along the west coast of the country, the south coast beaches are mostly dissipative-intermediate, and the east coast beaches range from short, estuarine pocket and embayed beaches in the former Transkei (south east), to longer intermediate and reflective beaches in KwaZulu-Natal (in the north east). Once combined with the three biogeographic regions, and distinguishing between estuarine and sandy shores, the South African coast comprised 24 different beach types. Representing shorelines in this form opens up potential for numerous spatial analyses that can not only further our understanding of sandy beach ecology at large spatial scales but also aid in deriving conservation strategies for this threatened ecosystem.     

The bed morphology of upland single‐thread channels in semi‐arid environments: evidence of repeating bedforms and their wider implications for gravel‐bed rivers

Single‐thread, gravel‐bed streams of moderate slope in the northern Negev are characterized by three channel units: bars exhibit steeper than average slopes and poorly sorted mixtures of small–medium cobbles and coarse–very coarse pebbles; flats are associated with more gentle slopes and well‐sorted medium–fine pebbles and granules; and transitional units have intermediate slopes and grain size. In general, all three units are planar, span the full channel width and have well‐defined boundaries. Bars and flats are more common than the transitional units and alternate downstream for distances of several hundred metres, forming sequences that are reminiscent of the riffle–pool structure commonly observed in humid‐temperate gravel‐bed rivers. A notable contrast is the absence of significant bed relief: bars lack crests and flats lack depressions. The relative lack of bed relief in bar–flat sequences is attributed to the high rate of sediment supply from the sparsely vegetated hillslopes which promotes the infilling of depressions and to the erosion of crests under conditions of intense transport. This reduction of bed relief lowers channel roughness, which in turn increases flow velocity and, therefore, the ability of the channel to transmit the large sediment loads it receives. Although our analyses pertain to a semi‐arid river system, the results have wider implications for understanding the adjustment of channel bedform to high sediment loads in other fluvial environments. Copyright © 2012 John Wiley & Sons, Ltd.     

Spiny plants in the archaeological record of Israel

The flora of Israel, like in other arid regions, has many spiny plants. We describe their existence in the archaeobotanical record of the last 780,000 years. Of 246 spiny/thorny species in the current flora, 19 are trees, 37 are shrubs, 50 are half-shrubs, 83 are perennial herbs and 57 are annuals. Forty-six (18.7%) spiny/thorny species were identified in the archaeobotanical record: 15 tree species (78.9%), ten shrub species (27.0%), six half-shrub species (12.0%), three perennial herb species (3.6%) and 12 annuals (21.1%). Because humans needed wood, trees were taken into their habitats. Since trees are better preserved than herbaceous plants and shrubs their remains are more common. Only a small proportion of the spiny/thorny half-shrubs and perennial herbs was found, probably because they are not a good source of firewood, construction materials, or human food. Spiny weeds, and segetal and ruderal plants entered the archaeobotanical remains either by chance, as seeds contaminating grain and fodder, growing at the sites, or through their deliberate use by ancient peoples as supplementary foods and medicine. The identified spiny/thorny species in the archaeobotanical record of Israel indicates that the flora was always spiny even before the significant human impact in the last several millennia.     

Effect of changes in fine‐grained matrix on bedload sediment transport in a gravel‐bed river

While clay and silt matrices of gravel‐bed rivers have received attention from ecologists concerned variously with the deteriorating environments of benthic and hyporheic organisms, their impact on sediment entrainment and transport has been explored less. A recent increase of such a matrix in the bed of Nahal Eshtemoa, an ephemeral river of the northern Negev, has more than doubled the boundary shear stress needed to initiate bedload, from 7 N m^‐2 (τ^* = 0.027) during the flash floods of 1991–2001 to 15 N m^‐2 (τ^* = 0.059) during those of 2008–2009. The relation between bedload flux and boundary shear stress continues to be well‐defined, but it is displaced. The matrix now contains a significant amount of silt and clay size material. The reasons for the increased entrainment threshold of bedload are explored. Large‐scale laser scanning of the dry bed reveals a reduction in grain‐scale morphological roughness, while artificial in situ tests of matrix integrity indicate considerable cohesion. The implications for adopting bed material sampling strategies that account for matrix development are assessed. Copyright © 2012 John Wiley & Sons, Ltd.