Bacterial and organic matter distribution in the sediments of the Thracian Sea (NE Aegean Sea)

Recently, black carbon has been introduced as the form of carbon that may be separated from the biologically mediated carbon cycle thereby representing the non-bioavailable fraction of the estimated organic carbon. It has been speculated that the bioavailability of organic matter may be a limiting factor for the presence of active bacteria within the sediments. In order to address this question, marine sediments were collected from the Thracian Sea (Eastern Mediterranean), a complex system impacted by riverine inputs and Black Sea water masses. In addition to counts of total bacteria, we estimated the fraction of active bacteria by using a destaining step to the DAPI staining method. Black carbon was also estimated following the thermal oxidation method in order to determine the fraction of the refractory organic matter. The fraction of black carbon to total organic carbon varied from 16% to 53% indicating that black carbon constitutes a significant pool of sedimentary organic carbon in the Thracian sea. A fraction ranging from 18% to 97% was scored as nucleoid containing cells. We did not record any significant differences in the fraction of nucleoid-containing bacteria among sediment depths (P<0.05) indicating that there was no accumulation of dead bacterial cells with depth. The same was observed for the fraction of black carbon and bioavailable organic carbon with sediment depth (P<0.05) indicating that benthic consumers are not the key regulators of the organic matter pool in these sediments but have a minor effect. A possible reason for these observations and for the uncoupling between the active bacterial fraction and the bioavailability of organic matter could be (i) the presence of refractory components in the estimated bioavailable organic matter and (ii) the hydrological and geological complexity of the study area. The North Aegean marginal slopes are highly unstable experiencing frequent seismic events. These events are capable of inducing sediment transport from the upper slopes thus altering the entire sediment profile. On the other hand, the significant correlations that were recorded between nucleoid-containing cells and phytopigments (chlorophyll a, phaeopigments, chloroplastic pigment equivalents) at all sediment depths indicate that bacterial communities respond immediately to the deposited phytodetritus, using it as a primary source of carbon and energy. Our data suggests that the Thracian Sea sediments are by no means homogeneous and can best be described as a mosaic controlled by numerous local and regional environmental factors.     

Benthic microbial abundance and activities in an intensively trawled ecosystem (Thermaikos Gulf, Aegean Sea)

Abundance of benthic bacteria, heterotrophic nanoflagellates and ciliates, extracellular enzymatic activities, bacterial C production, C mineralisation and sediment community oxygen consumption rates were measured in the Thermaikos Gulf (Northeastern Mediterranean), before (September 2001), and during intense trawling activities (October 2001 and February 2002). The biochemical composition of sedimentary organic matter has revealed that bottom trawling had an effect on the trophic state of Thermaikos Gulf. Changes on the benthic microbial food web were also recorded, during the three sampling seasons. Even though trawling-induced sediment resuspension did not alter significantly the abundance of the microbial components, with the exception of the most impacted station, it determined changes regarding their relative importance. Thus, the ratios of bacterium to nanoflagellates and ciliate to nanoflagellates abundance increased in the trawled stations, causing a sudden increase in bacterial C production, in comparison to the non-trawled station. Four months later, the effects of trawling on the microbial food web were less evident, masked possibly by the drastic decrease in the water temperature. The results of the present work suggest that bottom trawling induces alteration of the sedimentological variables and can be considered as a factor affecting the function of the microbial food web in marine coastal ecosystems. These alterations cause faster mobilisation of organic C buried in the sediment and increase nutrient concentrations and availability in the system, thus inducing an effect that could lead to coastal eutrophication.     

Integration of remote sensing and GIS in monitoring the dynamics of land cover in Oroba-Kibos catchment area, Kenya

Land cover in Kenya is in a state of fl ux at different spatial and temporal scales. This compromises environmental integrity and socioeconomic stability of the population hence increasing their vulnerability to the externalities of environmental change. The Oroba-Kibos catchment area in western Kenya is one locality where rapid land use changes have taken place over the last 30 years. The shrubs, swamps, natural forests and other critical ecosystems have been converted on the altar of agriculture, human settlement, fuel wood and timber. This paper presents the results of a study that aimed at providing spatially-explicit information for effective remedial response through (a) Mapping the land cover; (b) Identifying the spatial distribution of land cover changes; (c) Determining the nature, rates and magnitude of the land cover changes, and; (d) Establishing the drivers of land use leading to land cover changes in Oroba-Kibos catchment area. Bi-temporal Landsat TM imagery, fi eld observation, household survey and ancillary data were obtained. Per-fi eld classifi cation of the Landsat TM imagery was performed in a GIS and the resultant land cover maps assessed using the fi eld observation data. Post-classifi cation comparison of the maps was then done to detect changes in land cover that had occurred between 1994 and 2008. SPSS was used to analyze the household survey data and attribute the detected land cover changes to their causes. The fi ndings showed that 9 broad classes characterize the catchment area including the natural forests, swamps, natural water bodies, woodlands, shrublands, built-up lands, grasslands, bare lands and croplands. Croplands are dominant and accounted for about 65% (57122 ha) of the total land in 1994, which increased at the rate of 0.89% to 73% (64772 ha) in 2008, while natural water bodies has the least spatial coverage accounting for about 0.6% (561 ha) of the total land in 1994, which diminished at the rate of 3.57% to 0.3% (260 ha) in 2008. Climate, altitude, access and rights to land, demographic changes, poverty, political governance, market availability and economic returns are the interacting mix of proximate and underlying factors that drive the land cover changes in Oroba-Kibos catchment area.     

Carbon speciation and composition of natural microbial communities in polluted and pristine sediments of the Eastern Mediterranean Sea

Sediment samples collected from polluted (Augusta Bay) and pristine regions of the Eastern Mediterranean Sea (South Ionian Sea, Thracian Sea) were analyzed for black carbon, aliphatic hydrocarbons and phospholipid ester-linked fatty acids (PLFA). The aim of the study was to investigate the anthropogenic and biogenic inputs into the Eastern Mediterranean Sea and to evaluate the effects of refractory organic matter (e.g. black carbon) and the level of hydrocarbon contamination on benthic microbial community composition. Black carbon, generally considered to be chemically and biologically inert, comprised a significant but highly variable fraction of the sedimentary carbon pool in the analyzed sediments with a ratio to total organic carbon ranging from 0.02 to 0.66. Principal component analysis of the chemical characteristics of the sediments (organic carbon content, black carbon, bioavailable organic carbon, chlorophyll a, phaeopigments, aliphatic hydrocarbons) revealed clustering of samples along a gradient from the most productive and contaminated region of Augusta Bay to the carbon-poor and pristine sediments of the Thracian Sea. PLFA analysis revealed that gram-negative bacteria and microeukaryotes were most abundant in Augusta Bay and in the most impacted station of the Thracian Sea. The high levels of branched and odd-chain fatty acids recorded for these stations is probably linked to the elevated amounts of hydrocarbons at these stations; e.g. microbial communities may have developed the ability to degrade either naturally occurring aliphatic hydrocarbons or hydrocarbons derived from oil contamination.