Population Structure of the SW Atlantic Estuarine Crab Neohelice granulata Throughout Its Range: a Genetic and Morphometric Study

Phylogeographic patterns of the SW Atlantic estuarine crab Neohelice granulata were examined using mitochondrial DNA cytochrome oxidase I sequences and analyzed together with morphometric data. Specimens were sampled during a 4-year period (2001?C2004) from 11 localities encompassing the full distributional range of this species along the SW Atlantic (22°57?? S to 42°25?? S). DNA sequences were obtained from 69 individuals belonging to seven localities, and morphometric variation in 12 continuous characters was analyzed for 646 crabs from ten localities. Strong genetic differentiation, consistent with a pattern of isolation-by-distance, was detected among all localities indicating that gene flow occurs mainly between neighboring populations. Analyses of molecular variance showed genetic subdivision between the southern (Argentina) and the northern (Brazil) sites, suggesting restricted gene flow at a regional scale. The genetic structure of this species could be divided into two distinct groups due to a limited gene flow between southern and northern regions as a consequence of larval dispersal patterns. Coastal currents in the vicinity of the Rio de la Plata likely act as a barrier to dispersal within the species range. Moreover, genetic data indicate that populations of N. granulata might have undergone a northward demographic expansion since the late Pleistocene. The morphometric analysis showed no geographical pattern of morphological differentiation, although there were differences among sampling sites.     

Realistic modelling of shelf-estuary regions

A very high-resolution modelling configuration was created for the estuary of Baía de Todos os Santos – BTS, Brazil (300 to 400 m), and adjacent coastal waters (600 to 1200 m). The adoption of a multi-corner domain approach allowed the variable spatial resolution required to resolve the shelf, the bay and their interactions. Seven years were simulated using realistic oceanic, atmospheric and riverine forcing. Model validation was done against observations showing the model skill to reproduce the thermohaline field, the tidal currents, as well as the variability of the free surface at tidal and sub-tidal time scales. The results provide the first representation of the tidal wave propagation along the bay, in terms of maps of amplitudes, phases and ellipses of the barotropic currents for the main tidal constituents. By analysing the residual currents at different depths, in terms of averages over the simulation period, several prominent structures were identified and named: (i) Salvador eddy (up to 0.2 m s⁻¹); (ii) St Antonio current (up to 0.45 m s⁻¹); (iii) Salvador current (up to 0.5 m s⁻¹); (iv) Itaparica eddy (up to 0.2 m s⁻¹); (v) Ilha dos Frades southern eddy (up to 0.1 m s⁻¹); and (vi) Ilha dos Frades northern eddy (up to 0.2 m s⁻¹). The model set-up proved to be highly efficient and robust simulating the BTS shelf-estuary region and such an approach may be suitable to other estuarine systems.

     

Continuous Monitoring Reveals Drivers of Dissolved Oxygen Variability in a Small California Estuary

Estuarine ecosystem diversity and function can be degraded by low oxygen concentrations. Understanding the spatial and temporal patterns of dissolved oxygen (DO) variation and the factors that predict decreases in DO is thus essential to inform estuarine management. We investigated DO variability and its drivers in Elkhorn Slough, a shallow, well-mixed estuary affected by high nutrient loading and with serious eutrophication problems. Long-term (2001–2012), high-resolution (15 min) time series of DO, water level, winds, and solar radiation from two fully tidal sites in the estuary showed that hypoxia events close to the bottom are common in the summer at the more upstream estuarine station. These events can occur in any lunar phase (spring to neap), at any time of the day, and both on sunny or cloudy days. They are, however, short-lived (lasting in average 40 min) and mainly driven by momentary low turbulent diffusion around slack tides (both at high and low water). Tidal advective transport explains up to 52.1% of the daily DO variability, and the water volume (or DO reservoir) contained in the estuary was not sufficient to avoid hypoxia in the estuary. Solar radiation was responsible for a positively correlated DO daily cycle but caused a decreased in the averaged DO in the summer at the inner station. Wind-driven upwelling reduced the average DO at the more oceanic station during spring. The approach we employed, using robust techniques to remove suspect data due to sensor drift combined with an array of statistical techniques, including spectral, harmonic, and coherence spectrum analysis, can serve as a model for analyses of long-term water quality datasets in other systems. Investigations such as ours can inform coastal management by identifying key drivers of hypoxia in estuaries.     

Hydrology and Salt Balance in a Large, Hypersaline Coastal Lagoon: Lagoa de Araruama, Brazil

Lagoa de Araruama in the state of Rio de Janeiro, Brazil, is a hypersaline coastal lagoon as a result of semi-arid climate conditions, a small drainage basin and a choked entrance channel. The lagoon has been continuously hypersaline for at least 4·5 centuries, but the mean salinity has varied substantially. It has recently decreased from 57 to 52 as indicated by density (salinity) measurements between 1965 and 1990.Analysis of more than 20 years of salinity time series data, in addition to monthly lagoon cruises to measure the spatial salinity distribution, indicate that the lagoon salinity largely fluctuates in response to the difference between evaporation and precipitation. The major factor explaining the long-term trend of decreasing salinity in the lagoon is the constant pumping of 1 m³s⁻¹of freshwater to the communities surrounding the lagoon from an adjacent watershed, and subsequent discharge of this water into Lagoa de Araruama. The net salt budget is primarily a balance between the advective import of salt from the coastal ocean and eddy diffusive export of salt to the ocean, although the extensive mining of salt from the lagoon during past decades is also a small but significant contribution to the salt budget. The flushing half-life is proposed as a useful time scale of water exchange, is calculated based on a combination of hydrological and tidal processes, and is excellent for comparison of lagoons and assessing water quality changes. The flushing half-life measures 83·5 days for Lagoa de Araruama, considerably longer than for most other coastal lagoons. The proposed dredging of a second ocean channel to Lagoa de Araruama is probably not a good idea. It is likely to accelerate the decrease of lagoon salinity and somewhat improve the lagoon water exchange. At the same time, this will eliminate the apparent buffering capacity provided by the hypersaline environment, and thus may potentially cause water quality problems.