In situ sampling reveals rapid uptake and depuration of polycyclic aromatic hydrocarbons by surf clams (Paphies subtriangulata) affected by the Rena oil spill

ABSTRACT

To investigate the uptake and depuration of polycyclic aromatic hydrocarbons associated with the Rena oil spill we sampled the surf clam Paphies subtriangulata at two open coast locations (6?km apart) just prior to oil coming ashore (7 October 2011), then at 1–3 week intervals for the next 4 months. Total polycyclic aromatic hydrocarbons (tPAH) increased at both sites from 1 to 96–124?µg?kg^?1 (wet weight) by 18 October before declining to low levels (<4?µg?kg^?1) by February 2012. Ongoing sampling throughout 2012–2014 included three additional sites to the north east (up to 30?km away) and a site 5?km to the south east revealing tPAH levels generally <10?µg?kg^?1 except in October 2013 where levels ranged between 39–45?µg?kg^?1 at all sites. A comparison of PAH component profiles with oil-contaminated beach sediment indicated that the high levels observed in surf clams between October–December 2011 were clearly associated with the Rena spill. However, the October 2013 peak had a PAH profile inconsistent with weathered Rena oil, suggesting an alternative source of contamination. Our results highlight the potential for P. subtriangulata as a PAH monitoring tool but recognise more study is needed to better quantify baseline levels and uptake and depuration dynamics.     

Patterns and trends in seabird bycatch in the pelagic longline fishery off South Africa

Both foreign and domestic pelagic longline fishing vessels operate in South Africa’s Exclusive Economic Zone and adjacent international waters where they kill hundreds of seabirds each year as bycatch. To update assessments of the impact of the pelagic longline fishery on seabirds off South Africa, information on necropsied seabirds and national fisheries observer bycatch records were summarised for 2006–2013. Foreign-flagged (Asian) vessels had 100% observer coverage throughout the study period, whereas only 6% of the fishing effort by South African-flagged vessels was observed (with no coverage in 2011–2013). Vessels with observers caught seabirds at a rate of 0.132 birds per 1 000 hooks, resulting in an estimated mortality of 2 851 individuals (356 per year) comprising 14 species. Extrapolation of the observed fishing sets to the unobserved fishing sets by the South African domestic longline fleet suggested that approximately 750 additional birds were likely killed during the study period, therefore a combined 450 birds were killed per year. White-chinned petrel Procellaria aequinoctialis was the most frequently killed species (66%), followed by ‘shy-type’ albatrosses Thalassarche cauta/steadi (21%), black-browed albatross T. melanophris (7%), Indian yellow-nosed albatross T. carteri (3%), and Cape gannet Morus capensis (2%). The seabird bycatch rates were lower than in 1998–2005. Nationality of the vessel, time of line-setting, moon phase, year, season, fishing area, and seabird bycatch mitigation measures all influenced seabird mortality. Concurrent with 100% observer coverage, significant reductions in the seabird bycatch rate occurred in the Asian fleet in the latter years of the study, and these rates now approximate the national target (0.05 birds per 1 000 hooks). However, seabird bycatch rates remained high in the South African fleet, where no observers were deployed during 2011–2013, highlighting the need for independent observer programmes in fisheries—a matter of global interest. Suggestions are made as to how seabird bycatch by pelagic longline fisheries off South Africa may be further reduced.     

Remediation of a major acid mine drainage point source discharge restores headwater connectivity for a diadromous native fish

Rivers receiving acid mine drainage (AMD) are frequently depauperate in fish and impacts may extend long distances downstream. AMD inputs may form chemical barriers for migratory species and isolate fish in unimpacted headwaters. We investigated the response of a diadromous fish, kōaro (Galaxias brevipinnis), to remediation of an AMD tributary in a 5th order river in New Zealand. A 2005 survey indicated limited recruitment of kōaro in the river likely due to the chemical barrier of AMD. By 2010, water treatment in the contaminated tributary had raised pH from a median value of 4.3 to 6 and reduced metals in the lower river, notably aluminium from a median of 2.48 to 0.41?mg/L. In 2012, kōaro density had increased by an order of magnitude relative to 2005. Furthermore, a greater proportion of juvenile fish were present. These results indicate that large-scale remediation of discharges can reverse the impacts of AMD on fish migration.     

RIPGIS-NET: a GIS tool for riparian groundwater evapotranspiration in MODFLOW

RIPGIS-NET, an Environmental System Research Institute (ESRI's) ArcGIS 9.2/9.3 custom application, was developed to derive parameters and visualize results of spatially explicit riparian groundwater evapotranspiration (ETg), evapotranspiration from saturated zone, in groundwater flow models for ecohydrology, riparian ecosystem management, and stream restoration. Specifically RIPGIS-NET works with riparian evapotranspiration (RIP-ET), a modeling package that works with the MODFLOW groundwater flow model. RIP-ET improves ETg simulations by using a set of eco-physiologically based ETg curves for plant functional subgroups (PFSGs), and separates ground evaporation and plant transpiration processes from the water table. The RIPGIS-NET program was developed in Visual Basic 2005, .NET framework 2.0, and runs in ArcMap 9.2 and 9.3 applications. RIPGIS-NET, a pre- and post-processor for RIP-ET, incorporates spatial variability of riparian vegetation and land surface elevation into ETg estimation in MODFLOW groundwater models. RIPGIS-NET derives RIP-ET input parameters including PFSG evapotranspiration curve parameters, fractional coverage areas of each PFSG in a MODFLOW cell, and average surface elevation per riparian vegetation polygon using a digital elevation model. RIPGIS-NET also provides visualization tools for modelers to create head maps, depth to water table (DTWT) maps, and plot DTWT for a PFSG in a polygon in the Geographic Information System based on MODFLOW simulation results.     

Impact of land-surface elevation and riparian evapotranspiration seasonality on groundwater budget in MODFLOW models

Riparian groundwater evapotranspiration (ETg) constitutes a major component of the water balance especially in many arid and semi-arid environments. Although spatial and temporal variability of riparian ETg are controlled by climate, vegetation and subsurface characteristics, depth to water table (DTWT) is often considered the major controlling factor. Relationships between ETg rates and DTWT, referred to as ETg curves, are implemented in MODFLOW ETg packages (EVT, ETS1 and RIP-ET) with different functional forms. Here, the sensitivity of the groundwater budget in MODFLOW groundwater models to ETg parameters (including ETg curves, land-surface elevation and ETg seasonality) are investigated. A MODFLOW model of the hypothetical Dry Alkaline Valley in the Southwestern USA is used to show how spatial representation of riparian vegetation and digital elevation model (DEM) processing methods impact the water budget when RIPGIS-NET (a GIS-based ETg program) is used with MODFLOW’s RIP-ET package, and results are compared with the EVT and ETS1 packages. Results show considerable impact on ETg and other groundwater budget components caused by spatial representation of riparian vegetation, vegetation type, fractional coverage areas and land-surface elevation. RIPGIS-NET enhances ETg estimation in MODFLOW by incorporating vegetation and land-surface parameters, providing a tool for ecohydrology studies, riparian ecosystem management and stream restoration.     

A correction model for conditional bias in selective mining operations

A nonlinear correction functionK(Z*) is proposed to transform any initial linear grade estimatorZ* into a conditional unbiased estimatorZ**=K(Z*) with reduced conditional estimation variance. Such a corrected estimator allows more accurate prediction of ore reserves at any level of selection performed during the mine lifetime. The correction is based upon an analytical or isofactorial representation of a bivariate distribution model of true gradeZ and its estimatorZ*. This correction model allows derivation of conditional estimation variances for both estimatorsZ* andZ** and provides a solution to the problem of change of support. A case study is presented and performance of the proposed correction model is evaluated in terms of actual conditional bias and mean squared errors. Results obtained stress the practical importance of the correction model in selective mining operations.     

Biological data from sharks landed within the United Arab Emirates artisanal fishery

Landing site and market surveys of sharks landed along the Arabian Gulf coast of the United Arab Emirates were undertaken between October 2010 and September 2012 to obtain biological data from this artisanal fishery. Data were collected on the size and sex of 12 482 individuals representing 30 species. Maximum sizes of Carcharhinus sorrah, C. amblyrhynchoides and Hemipristis elongata were extended by at least 300?mm total length (TL) compared with published global maxima. The size at 50% maturity was determined for males of five species and this indicated that the males of smaller shark species (<1 000 mm maximum TL) in the fishery were largely mature. For many species, including Loxodon macrorhinus and Mustelus mosis, overall sex ratios were male-biased, indicating that sexual segregation is likely in those species. Furthermore, sex ratios for several species, such as Rhizoprionodon acutus, showed differences across seasons. Overall, the landings contained a high proportion of juveniles, causing concerns about the sustainability of this fishery. Biological parameters of a number of species differed from those recorded earlier for the region, demonstrating a need for additional local data collection to support the development of management measures.