Population genetic diversity and structure of a dominant tropical seagrass,Cymodocea rotundata,in the Western Pacific region

Cymodocea rotundata is an ecologically important tropical pioneer seagrass species distributed in the Indo‐Pacific region. The population genetic diversity and structure of this species were analysed at 46 sites spanning the Philippines, Ryukyu Islands (northern limit) and Hainan Island, by using microsatellite simple sequence repeat (SSR) markers. Analyses revealed the persistence of C. rotundata likely relies on local population dynamics and fitness influenced by environmental gradients, with sexual reproduction prevalent in the Philippines while the Ryukyu and Hainan populations were predominantly established by clonal spread. Analysis of molecular variance showed significant genetic differentiation (P < 0.001) among three geographic regions: the Philippines, Ryukyu and Hainan. Furthermore, the mean fixation index value was very high (F_ST = 0.36), indicating poor dispersal potential or limited gene flow. Allelic richness and heterozygosity of C. rotundata was comparable in the Philippines and Ryukyu Islands populations. More private alleles were found in the Philippines and excess heterozygotes in the Ryukyu Islands. STRUCTURE analysis revealed that the Ryukyu and Hainan populations were mosaics of admixed alleles of individuals from the Philippines. An assignment test suggested that recruitment occurs from the Northeast Philippines to Ryukyu Islands. These results suggest that the Philippine populations are tropical seagrass hotspots and perhaps the origin of the populations in the Ryukyu and Hainan Islands. This scenario is most likely driven by the Kuroshio Current and island integration events during plate tectonic activities. The Philippine Archipelago is considered of high importance for conservation objectives and management plan of seagrasses. Likewise, the Ryukyu Islands are also important in terms of conserving regional diversity because locally adapted genotypes have important evolutionary potential in the face of environmental change.     

秋季南黄海浮游动物分布及其影响因素

基于2007年秋季在南黄海（32°20'~37°00'N;124°E以西）进行的浮游动物及环境因子大面调查;分析了秋季南黄海浮游动物种类组成、分布特征及其影响因素;主要结果如下:共鉴定浮游动物113种（不包括25种浮游幼体）;中华哲水蚤（Calanus sinicus）、强壮滨箭虫（Aidanosagitta crassa）、磷虾幼体（Euphausia larvae）和小齿海樽（Doliolum denticulatum）是秋季优势种;浮游动物丰度为（156.37±12.04）ind/m3;生物量为（172.57±10.41）mg/m3;与历史调查数据相比;本航次浮游动物丰度和生物量相对处于较高水平;磷虾幼体分布趋势与中华假磷虾（Psudeuphausia sinica）一致;说明秋季是中华假磷虾种群的一个重要的补充时期;小齿海樽在南黄海的大量出现系自身种群补充的结果;精致真刺水蚤（Euchaeta concinna）和肥胖软箭虫（Flaccisagitta enflata）主要分布在深水区;在近岸海区很少出现。中华哲水蚤、强壮滨箭虫丰度高值区倾向分布于海洋锋附近;进一步佐证了海洋锋对浮游动物的积聚作用。     

胶州湾表层海水碳酸盐体系的季节变化

根据2007年8月(夏季),11月(秋季),2008年1月(冬季)和2010年4月(春季)在胶州湾海域测得的p H、溶解无机碳(DIC)、总碱度(Alk),以及通过以上参数计算得到的二氧化碳分压(p CO2)的数据,结合现场的化学、水文、生物等参数,探讨和分析了该海域的二氧化碳各参数的分布特征、季节变化和影响因素。结果表明:胶州湾p H、DIC、Alk和p CO2的年变化范围分别为:7.77—8.30,1949.2—2201.8μmol/kg,2033.9—2382.5μmol/kg和89.9—745.3μatm,均呈现明显的时空变化。温度是影响胶州湾碳酸盐体系的主要影响因素之一,同时陆地径流和降水会降低海水碳酸盐体系中各参数的含量,但是人类活动和生物活动也会在一定程度上增加DIC、Alk和p CO2的含量。     

许氏平鲉(Sebastes schlegeli)微卫星标记开发及野生、养殖群体遗传多样性分析

对许氏平鲉进行简化基因组测序,设计微卫星引物200对,可稳定扩增的引物190对,占95%。利用一个荣成野生群体对24个多态性较高的微卫星标记进行了评价,每个位点的等位基因数(Na)为2—21个,观测杂合度(Ho)为0.0417—0.9167,期望杂合度(He)为0.0278—0.9722,多态信息含量(PIC)为0.1948—0.9496,结果显示有20个微卫星位点为中高度多态。利用这些引物对荣成野生群体和烟台养殖群体的遗传多样性进行了比较分析,野生和养殖群体的平均等位基因数(Na)分别为8.5000、6.9583,有效等位基因数(Ne)的均值分别为4.5484、3.6365,期望杂合度(He)均值分别为0.6421、0.5840,多态信息含量均值(PIC)分别为0.6088、0.5490,平均香农-威纳指数均值为1.4605、1.2834,但F检验发现无显著差异,发现两个群体的遗传多样性都处于高度多态水平,但养殖群体遗传多样性水平低于野生群体。本研究结果说明许氏平鲉的人工繁育中,通过使用较大数量的亲本进行繁育可有效防止选育群体的遗传多样性降低,但人工定向选育对选育群体的遗传多样性也产生了一定的影响。Bonferroni校正后在两个群体中各有4个位点偏离Hardy-Weinberg平衡。本研究开发的微卫星标记为许氏平鲉遗传图谱构建、分子标记辅助育种等提供了更多标记选择,对野生和养殖群体遗传多样性分析为下一步的遗传育种提供参考。     

利用父母本微卫星标记估计大菱鲆(Scophthalmus maximus L.)幼鱼生长性状的遗传参数

The estimation of genetic parameters has played an important role in animal selective breeding for growth traits.Recently studies show that molecular markers can be incorporated into genetic evaluations. In order to improve the performance of an incomplete pedigree(i.e, only parents are known) in the genetic evaluations, 12 microsatellite markers have been applied in the estimation of the genetic parameters for body weight in a farmed population(n=1 890) of juvenile turbot(Scophthalmus maximus L.). A new relatedness called parental molecular relatedness(PMR) is estimated based on results of genotyping of 48 parents(31 males, 17 females) with microsatellites markers. The feasibility of PMR in estimation of genetic parameters is verified by comparison with pedigree related(PR) which is obtained from a complete pedigree. The results demonstrate that a high correlation(0.872) between them is found. Heritabilities are estimated using the PMR(0.52±0.13) and PR(0.55±0.22) with the same animal model. A cross-validation shows that the predictive abilities of models using the PMR and the PR are identical(0.81). From that, a conclusion can be made that PMR and PR predicted genetic values equally well in a population of juvenile turbot. Therefore PMR can be applied as an alternative of the PR when only parents are known. However, for a better performance, more markers and more families should be included in a further study.     

Controls on reservoir heterogeneity of tight sand oil reservoirs in Upper Triassic Yanchang Formation in Longdong Area,southwest Ordos Basin,China: Implications for reservoir quality prediction and oil accumulation

Compared to conventional reservoirs, pore structure and diagenetic alterations of unconventional tight sand oil reservoirs are highly heterogeneous. The Upper Triassic Yanchang Formation is a major tight-oil-bearing formation in the Ordos Basin, providing an opportunity to study the factors that control reservoir heterogeneity and the heterogeneity of oil accumulation in tight oil sandstones.The Chang 8 tight oil sandstone in the study area is comprised of fine-to medium-grained, moderately to well-sorted lithic arkose and feldspathic litharenite. The reservoir quality is extremely heterogeneous due to large heterogeneities in the depositional facies, pore structures and diagenetic alterations. Small throat size is believed to be responsible for the ultra-low permeability in tight oil reservoirs. Most reservoirs with good reservoir quality, larger pore-throat size, lower pore-throat radius ratio and well pore connectivity were deposited in high-energy environments, such as distributary channels and mouth bars. For a given depositional facies, reservoir quality varies with the bedding structures. Massive- or parallel-bedded sandstones are more favorable for the development of porosity and permeability sweet zones for oil charging and accumulation than cross-bedded sandstones.Authigenic chlorite rim cementation and dissolution of unstable detrital grains are two major diagenetic processes that preserve porosity and permeability sweet zones in oil-bearing intervals. Nevertheless, chlorite rims cannot effectively preserve porosity-permeability when the chlorite content is greater than a threshold value of 7%, and compaction played a minor role in porosity destruction in the situation. Intensive cementation of pore-lining chlorites significantly reduces reservoir permeability by obstructing the pore-throats and reducing their connectivity. Stratigraphically, sandstones within 1 m from adjacent sandstone-mudstone contacts are usually tightly cemented (carbonate cement > 10%) with low porosity and permeability (lower than 10% and 0.1 mD, respectively). The carbonate cement most likely originates from external sources, probably derived from the surrounding mudstone. Most late carbonate cements filled the previously dissolved intra-feldspar pores and the residual intergranular pores, and finally formed the tight reservoirs.The petrophysical properties significantly control the fluid flow capability and the oil charging/accumulation capability of the Chang 8 tight sandstones. Oil layers usually have oil saturation greater than 40%. A pore-throat radius of less than 0.4 μm is not effective for producible oil to flow, and the cut off of porosity and permeability for the net pay are 7% and 0.1 mD, respectively.     

Marine science and technology transfer: Can the Intergovernmental Oceanographic Commission advance governance of biodiversity beyond national jurisdiction?

Marine scientific research is crucial to forge solutions in the development of a new international legally binding instrument for the conservation and sustainable use of marine biological diversity in areas beyond national jurisdiction (ABNJ) under the 1982 United Nations Convention on the Law of the Sea . The transfer of marine technology, capacity development and marine genetic resources are key issues. This paper examines how the Intergovernmental Oceanographic Commission (IOC), as a competent international organisation for marine scientific research and technology transfer, can inform the development of the instrument. Synergies between marine technology transfer and non-monetary benefit sharing of genetic resources are illustrated. Four key lessons from the IOC are examined: 1. Coordinating international cooperation in marine scientific research; 2. Enabling open access to data and knowledge; 3. Facilitating capacity development through scientific training and education; and 4. Governance of marine scientific research. Realising the potential of the IOC to advance governance solutions for ABNJ will depend on increased political will from Member States and strengthened partnerships to reduce resource constraints and enhance the IOC's capacity at global and regional scales.     

岬湾海滩剖面中长期变化特征及其控制因素——以青岛石老人海滩为例

了解海滩剖面变化可以更好地理解海滩动态过程。利用2007年5月~2014年12月近8 a青岛石老人海滩剖面的实测资料,计算剖面各段单宽体积变化量及后滨宽度,结合交叉小波和小波相干分析方法,探讨海滩剖面中长期淤蚀变化特征及其控制因素。结果表明,近8 a来海滩剖面表现为侵蚀状态,不同岸段侵蚀程度不同。剖面1岸段侵蚀明显,剖面2和剖面3岸段轻微侵蚀。剖面的变化过程可划分为平稳期、剧变期和微调期3个时期。各时期剖面的季节性变化较复杂,平稳期具冬蚀夏淤的交替变化特征,整体淤蚀量较小;剧变期剖面呈阶段性蚀退,变化幅度相对较大,微调期剖面可能仍处于剧变期的恢复阶段,季节性变化不明显。剧变期和微调期的小波交叉谱和相干谱分析显示,波浪和前滨单宽体积相干性较好,尤其当大于2 m的波高达到10%以上,海滩地形可以和波高变化产生同周期的变化。因此波高变化基本控制了剖面的季节变化。而海滩长周期变化主要受控于风暴潮作用及其漫长的恢复期,沿岸输沙和海平面变化则一定程度上导致了剖面长期侵蚀格局的形成。     

南极低温降解菌Shewanella sp. NJ49羟化酶分离纯化及最适产酶条件研究

羟化酶是细菌降解烷烃的关键酶,本文以南极低温降解菌Shewanella sp.NJ49为研究对象,通过硫酸铵沉淀、超滤浓缩及葡聚糖凝胶Sephadex G-75柱层析方法,分离纯化NJ49的羟化酶,获得了单一羟化酶组分,研究了温度、p H、表面活性剂和盐度等环境因素对NJ49羟化酶酶活活性影响。结果表明,羟化酶组分由α、β、γ三个亚基组成,分子质量分别为56,45和36 k D。NJ49最适产酶条件为:温度15℃、p H7.2、盐度55;不同类型表面活性剂对酶的活性影响效应不一,两性离子表面活性剂、阳离子表面活性剂、非离子表面活性剂对酶活没有作用,阴离子表面活性剂+非离子表面活性剂混和剂和阳离子表面活性剂+非离子表面活性剂混和剂能提高羟化酶的活性。     

辽东湾中部海域春季大型底栖生物的群落结构及影响因子

2013年5月对辽东湾中部的大型底栖生物进行了调查,分析了该海域底栖生物的种类组成、丰度、生物量、群落结构及其与环境因子的关系。调查海域共发现大型底栖生物70种,包括多毛类24种,甲壳类18种,软体动物20种,棘皮动物7种,纽虫1种。相对重要性指数大于100的种类有14种,排名前3位的分别是日本游泳水虱、毛蚶、日本长尾虫。底栖动物丰度平均值为244.2个/m~2,生物量为52.52 g/m~2,棘皮动物是生物量的重要贡献者。多样性指数平均值为3.24,丰度生物量比较曲线分析结果认为调查海域大型底栖动物群落未受到干扰,底栖生物群落的结构相似性较低,在20%的相似程度上可分为5个组。底层水中溶解氧含量是影响底栖生物的主要因素,不同底质条件是影响底栖生物生物量和群落结构的重要因素。