赤潮叉角藻18SrDNA和ITS区序列测定与分析

采用PCR及克隆测序的方法，对1998年引发渤海赤潮的叉角藻18SrRNAadldey DNAITS区（Internal Transcribed Spacer Regions)进行了序列测定与分析。并通过因特网从国际分子生物学数据库中获取甲藻另外15个种的18rDNA序列，以Tetrahymena corlissi作为类群，分别采用Neighbor-Joining和Fitch方法构建甲藻较为一致和可靠的进化树图，探讨具有高度多样性和在分类上争议较多的甲藻各类群之间的形态与分子进化关系。结果表明，Prorocentrum(有2个简单的壳板）出现得较早，而大多数多甲藻目（覆盖着多个壳板）、裸甲藻目（大多数不具壳板）和膝沟藻目的成员较晚出现。另外，对叉角藻ITS区的分析表明，ITS区为高变区，是良好的分子标记，可用于叉角藻快速鉴定的专一性核酸分子探针的研制。     

固体介质中弹性波传播机制的细胞自动机有限深势阱模型

分析了采用细胞自动机研究波动问题的建模方法，针对一维、均匀、各向同性固体介质中弹性纵波的微观机制，借用一经典弹簧振子模型、细胞自动机格子气模型，以及量子力学中的无限深势阱模型，建立了一个细胞自动机有限深势阱模型，从量子力学角度出发，基于介观物理和纳米概念，以微观精子的德布罗意假设为基础，利用薛定谔方程，讨论了该模型中粒子（分子组）的振动速度与粒子物质波波速之间的联系，给出了模型中的波动方程，得出ζ＝Vp（ζ为粒子振动速度，Vp为物质波纵波波速）。同时还讨论了模型中粒子的大小和能量传递问题，引入引力场，得出了能量及引力势的量子化条件，另外，对声波速度、格子气粒子振动速度和本文模型中分子组振动速度进行了比较；还对本文模型中的粒子能量分布作了分析。     

Layer parallel shortening in salt-detached folds: constraint on cross-section restoration

Cleavage-fissility perpendicular to bedding is a common feature in the external part of fold-and-thrust belts. Three techniques were used to determine the internal distortion in the frontal Southern Pyrenees: the analysis of strain markers such as burrows and rain drops, the measurement of fissility, and the measurement of anisotropy of magnetic susceptibility (AMS). The comparison of the three techniques showed a good fit although they differ in sensitivity to penetrative strain variations in the range of deformation values explored in the study case. On the regional scale, the values of layer parallel shortening (LPS) derived from the markers analysis are very constant and account for 16–23% of shortening. These values are two to three times larger than the shortening values calculated from the restoration of the macroscopic scale structures and indicate a good decoupling above the Cardona salt Formation. This study permitted an accurate restoration of the low-amplitude el Guix detached anticline.     

Molecular and morphometric characterisation of the invasive signal crayfish populations in Croatia

The signal crayfish Pacifastacus leniusculus (Dana, 1852) is a native species to North America. It was introduced to Europe and Japan where it rapidly spread as an invasive species. In Croatia, it is recorded in the rivers Mura and Drava, where it spread downstream from Slovenia, and in the Korana River, where it has been recently illegally introduced. In the invaded areas, signal crayfish outcompetes native crayfish species. Since the knowledge on the genetic diversity of this invasive species is limited, microsatellite markers and sequences of mitochondrial gene for 16S rRNA were analysed to explore the genetic relations between the two Croatian populations (Mura and Korana rivers) as well as their relation to other already studied European populations. Moreover, 16S rRNA sequence fragments of Croatian samples were compared with those from the native range in the west North America. Morphometric characteristics were also studied to determine if there are significant differences between studied populations and if these are concordant with the genetic analyses results. Also, morphometric data were used to assign Croatian signal crayfish into subspecies classification according to Miller’s discriminant function formula, and to compare claw surface area among Croatian, Japanese and North American populations. Based on the results of morphometric characteristics Croatian samples showed Pacifastacus leniusculus leniusculus-like morphology. Phylogenetic reconstruction based on 16S rRNA, positioned Croatian samples into P. leniusculus sensu Larson et al. (2012). Results on microsatellite markers showed that the genetic diversity of P. leniusculus in the Mura River population is slightly higher compared to the Korana River population, but these two populations do not form separated genetic clusters. This study contributes to the knowledge on genetic variability and morphometric characteristics of signal crayfish in Europe and further understanding of its success as an invasive species.     

浅析网格化测量标志巡查信息直报技术

测量标志巡查是加强测量标志管护的重要手段。本文采用网格化理念设计,集成应用网络、智能移动终端、工作流、地图网络化服务等技术提出了一种测量标志巡查信息直报技术,可实现全省测量标志巡查信息的采集、实时在线或事后离线(WIFI等)巡查信息报送、审核、入库、应用等业务的网络化、准实时化、一体化,提高了测量标志巡查工作的科学化和规范化。     

Population genetic diversity and structure of a dominant tropical seagrass,Cymodocea rotundata,in the Western Pacific region

Cymodocea rotundata is an ecologically important tropical pioneer seagrass species distributed in the Indo‐Pacific region. The population genetic diversity and structure of this species were analysed at 46 sites spanning the Philippines, Ryukyu Islands (northern limit) and Hainan Island, by using microsatellite simple sequence repeat (SSR) markers. Analyses revealed the persistence of C. rotundata likely relies on local population dynamics and fitness influenced by environmental gradients, with sexual reproduction prevalent in the Philippines while the Ryukyu and Hainan populations were predominantly established by clonal spread. Analysis of molecular variance showed significant genetic differentiation (P < 0.001) among three geographic regions: the Philippines, Ryukyu and Hainan. Furthermore, the mean fixation index value was very high (F_ST = 0.36), indicating poor dispersal potential or limited gene flow. Allelic richness and heterozygosity of C. rotundata was comparable in the Philippines and Ryukyu Islands populations. More private alleles were found in the Philippines and excess heterozygotes in the Ryukyu Islands. STRUCTURE analysis revealed that the Ryukyu and Hainan populations were mosaics of admixed alleles of individuals from the Philippines. An assignment test suggested that recruitment occurs from the Northeast Philippines to Ryukyu Islands. These results suggest that the Philippine populations are tropical seagrass hotspots and perhaps the origin of the populations in the Ryukyu and Hainan Islands. This scenario is most likely driven by the Kuroshio Current and island integration events during plate tectonic activities. The Philippine Archipelago is considered of high importance for conservation objectives and management plan of seagrasses. Likewise, the Ryukyu Islands are also important in terms of conserving regional diversity because locally adapted genotypes have important evolutionary potential in the face of environmental change.     

帘蛤科4种养殖蛤群体遗传多样性和种间关系的fAFLP分析

利用荧光标记扩增片段长度多态性(fAFLP)技术对文蛤(Meretrix meretrix)、青蛤(Cyclina sinensis)、菲律宾蛤仔(Ruditapes philippinarum)和硬壳蛤(Mercenaria mercenaria)4种帘蛤科贝类的群体遗传多样性和种间关系进行了研究。选择EcoRⅠ/MseⅠ进行酶切,使用6个E 3/M 3引物组合进行扩增,共获得1 096个位点,多态位点比率95.1%,片段长度50~456 bp。其中,文蛤、青蛤、菲律宾蛤仔和硬壳蛤分别得到681,715,702和694个位点,相应的多态位点比率为76.8%,81.7%,83.0%和75.1%,得到17个种特异性位点,可作为4物种特征标记。分析了群体遗传相似系数和遗传多样性指数以及种间遗传相似系数。结果表明,硬壳蛤群体遗传相似系数最高(0.670 9),遗传多样性指数最低(0.236 0);菲律宾蛤仔群体遗传相似系数最低(0.592 5),遗传多样性指数最高(0.261 8);根据遗传相似系数采用UPGMA法构建了4物种32个体的聚类图,表明文蛤与菲律宾蛤仔遗传关系最近,青蛤与其他3物种遗传关系较远。     

皱纹盘鲍野生与养殖群体微卫星标记遗传变异研究

采用7个微卫星标记对辽宁大连、山东烟台、荣城、崂山和胶南5个皱纹盘鲍养殖群体,以及山东长岛、荣城、日本岩手、韩国仁川4个皱纹盘鲍野生群体进行了群体遗传多样性与遗传分化的研究.结果表明,从等位基因数与杂合度上分析,养殖群体(N=8.0～9.4,He=0.754～0.787)遗传多样性显著低于野生群体(N=11.3～15.0,He=0.821～0.866);等位基因频率分布揭示出野生群体中一些稀有等位基因在养殖群体中有所丢失;亲鲍选用数量少与性别比例不均衡可能是产生养殖群体中遗传多样性显著减少的原因.通过对等位基因频率比较分析,5个养殖群体之间以及养殖群体与野生群体之间观察到显著差异的Fst与Rst值,野生群体之间日本群体Fst与Rst值与其他3个野生群体差异显著,群体间存在遗传分化;养殖群体间遗传距离与地理距离不相关,可能是皱纹盘鲍育苗过程中亲鲍和苗种频繁交流所造成的结果;日本群体与其他3个野生群体间存在显著遗传分化与皱纹盘鲍短暂的浮游期与有限的扩散能力有关.     

基于SLAF-seq技术的黑棘鲷微卫星标记开发及其在鲷科鱼类中的通用性研究

黑棘鲷(Acanthopagrusschlegelii)是广泛分布于西北太平洋的暖温性中下层经济鱼类,也是我国沿海重要的海洋捕捞鱼类和增养殖对象。然而,目前有关黑棘鲷的微卫星标记研究报道较少,难以对其种质资源状况作出精确评估。本研究采用SLAF-seq技术测序共获得22489个二至六碱基重复的黑棘鲷微卫星序列,短重复序列(二、三碱基)占总微卫星序列的90.8%,长重复序列(四至六碱基)占有9.2%。经过157对随机合成引物的多态性筛选,开发出49个高多态性的黑棘鲷微卫星标记,其中短重复序列位点有25个,长重复序列位点有24个。每个位点的等位基因数(Na)为2—20(均值为8.3),观测杂合度(Ho)和期望杂合度(He)分别为0.097—0.938和0.122—0.922(均值分别为0.663和0.701),多态信息含量(PIC)为0.118—0.897(均值为0.655)。经Bonferroni校正后,有47个位点符合哈迪-温伯格平衡(HWE),各位点间未检测到连锁不平衡现象,仅2个位点偏离HWE。结果表明,所开发的大部分微卫星标记具有高多态性,蕴含的遗传信息含量较为丰富,能够为黑棘鲷的种群遗传资源评估提供数量充足、类型多样的有效分子标记。跨物种扩增结果显示,有43个黑棘鲷微卫星标记可在9种鲷科鱼类中成功扩增,其中28个标记在太平洋棘鲷(Acanthopagruspacificus)、黄鳍棘鲷(Acanthopagruslatus)和澳洲棘鲷(Acanthopagrusaustralis)中具有较好的通用性,2个标记在平鲷(Rhabdosargussarba)、蓝点赤鲷(Pagruscaeruleostictus)、真赤鲷(Pagrusmajor)、二长棘犁齿鲷(Evynnis cardinalis)及黄牙鲷(Dentex hypselosomus)中具有通用性。这些通用性标记可为阐明鲷科属、种间的系统进化关系和棘鲷属鱼类的群体遗传学分析提供新的标记来源和研究角度。     

山东日照和福建厦门沿海花鲈(Lateolabrax japonicus)遗传多样性的RAPD研究

采用RAPD技术 ,分析了日照、厦门沿海花鲈两群体的遗传多样性水平。结果表明 ,31条随机引物共扩增出两地花鲈 45 5条RAPD标记带 ,其中日照群体占 2 63条 ,厦门群体为1 92条 ;45 5条中有 1 84条带为两群体共有。日照群体内遗传相似度I为 0 892 8(差异度为0 1 0 72 ) ,厦门群体I为 0 92 2 5 (差异度为 0 0 775 ) ,而两者群体间的遗传相似度I为 0 8338(遗传距离D =0 1 662 )。两地花鲈在基因组DNA水平上存在较大的遗传差异。利用随机引物S1 1、S42、S45、S5 2和S2 0 3,在花鲈两群体间扩增出 8条稳定、明显的群体间特异性标记带