长江口及其附近海域细菌和三磷酸腺苷的分布特征

于1986年1月和7月在长江口及其附近海域进行了细菌的落射荧光直接计数和三磷酸腺苷(ATP)浓度的测定,同时取分样进行了微生物呼吸作用耗氧速率和叶绿素浓度的测定。结果表明,细菌数量和ATP浓度夏季较冬季高,总的分布趋势是,高值区出现在内河段和长江口,向外海逐渐降低;细菌数同悬浮体浓度、硝酸盐浓度和耗氧速率呈正相关,与盐度呈负相关。冬季,在整个海域细菌是ATP的主要贡献者和溶解氧的主要消耗者;夏季,沿冲淡水方向ATP出现两个峰值,第一峰值出现在长江口的最大浊度带,由细菌所贡献;第二个出现在盐度25—30的区域,由浮游植物所贡献。呼吸作用耗氧速率也呈现了与ATP相似的分布特征。     

The relative contributions of physical and microbiological factors to cohesive sediment stability

The stabilising effects of natural benthic diatom and bacterial assemblages on cohesive sediments were compared with those caused by physico-chemical binding alone. Cohesive sediment beds were reconstructed in 4 annular laboratory miniflumes, using sediment collected at 5–6 m water depth from a local fjord. The sediment was left to stabilise (consolidate) for 1, 2, 5 and 10 days, before being fully resuspended in a series of erosion experiments. The flumes were aerated and subjected to different light/dark conditions; antibiotics were used to isolate diatom from bacteria effects. During consolidation, a constant current velocity was maintained, at a speed well below erosion threshold.     

Microbial primary dolomite from a Norian carbonate platform: northern Calabria, southern Italy

The origin of fine‐grained dolomite in peritidal rocks has been the subject of much debate recently and evidence is presented here for a microbial origin of this dolomite type in the Norian Dolomia Principale of northern Calabria (southern Italy). Microbial carbonates there consist of stromatolites, thrombolites, and aphanitic dolomites. High‐relief thrombolites and stromatolites characterize sub‐tidal facies, and low‐relief and planar stromatolites, with local oncoids, typify the inter‐supratidal facies. Skeletal remains are very rare in the latter, whereas a relatively rich biota of skeletal cyanophycea, red algae and foraminifera is present in the sub‐tidal facies. Some 75% of the succession consists of fabric‐preserving dolomite, especially within the microbial facies, whereas the rest is composed of coarse dolomite with little fabric preservation. Three end‐members of dolomite replacement fabric are distinguished: type 1 and type 2, fabric retentive, with crystal size <5 and 5–60 μm, respectively; and type 3, fabric destructive, with larger crystals, from 60 to several hundred microns. In addition, there are dolomite cements, precipitated in the central parts of primary cavities during later diagenesis. Microbialite textures in stromatolites are generally composed of thin, dark micritic laminae of type 1 dolomite, alternating with thicker lighter‐coloured laminae of the coarser type 2 dolomite. Thrombolites are composed of dark, micritic clotted fabrics with peloids, composed of type 1 dolomite, surrounded by coarser type 2 dolomite. Marine fibrous cement crusts are also present, now composed of type 2 dolomite. Scanning electron microscope observations of the organic‐rich micritic laminae and clots of the inter‐supratidal microbialites reveal the presence of spherical structures which are interpreted as mineralized bacterial remains. These probably derived from the fossilization of micron‐sized coccoid bacteria and spheroidal–ovoidal nanometre‐scale dwarf‐type bacterial forms. Furthermore, there are traces of degraded organic matter, probably also of bacterial origin. The microbial dolomites were precipitated in a hypersaline environment, most likely through evaporative dolomitization, as suggested by the excess Ca in the dolomites, the small crystal size, and the positive δ¹⁸O values. The occurrence of fossilized bacteria and organic matter in the fabric‐preserving dolomite of the microbialites could indicate an involvement of bacteria and organic matter degradation in the precipitation of syn‐sedimentary dolomite.     

Stability of biological and inorganic hemimorphite: Implications for hemimorphite precipitation in non-sulfide Zn deposits

Hemimorphite, Zn₄Si₂O₇(OH)₂·H₂O, one of the most common minerals in non-sulfide Zn deposits, together with smithsonite and hydrozincite, is one of the most abundant minerals in the “calamine” deposits in SW Sardinia. In spite of their importance for the development of ore genesis models, the stability properties of hemimorphite are poorly known. This paper presents solubility experiments on two different types of hemimorphite: a “geological” hemimorphite from a supergene non-sulfide Zn deposit, of supposed abiotic origin, and a hemimorphite precipitated by bacterial activity. Both specimens were characterized, before and after the experiment, by Synchrotron Radiation X-ray powder diffraction, Scanning Electron Microscopy, and X-ray Absorption Spectroscopy. The calculated solubility product constants (logK_s) are similar for both “geological” and biogenic hemimorphite (30.3 ± 0.4 and 30.5 ± 0.1, respectively). During the solubility experiment, biological hemimorphite undergoes an amorphous to crystalline phase transition, and the distinctive features (mineralized bacterial sheaths and organic filaments), that allowed us to demonstrate its biological origin, are no longer recognizable by Scanning Electron Microscopy.The results of this study may be useful for developing ore genesis models, including evolution in a supergene environment, and in general for performing geochemical speciation and equilibrium calculations. Moreover, our findings open the way for a new interpretation of hemimorphite-forming processes, and suggest the possibility that bacteria may have played a role in the formation of this mineral in ore deposits.     

Jurassic lagoonal environments and quasi-abiotic platy limestone accumulation: microbial interventions

Within the regressive sequence (eustatic sea-level fall) that characterizes the French Southern Jura carbonate platform during the Kimmeridgian, a succession of three facies (called here units 1–3) may be observed in a palaeolagoon near Orbagnoux. Unit 1 is a shallow-water, intensely burrowed, carbonate deposit; unit 2 (consisting of laminated, organic matter-rich carbonate) represents a shallow lagoonal environment, prone to stromatolite development and organic matter accumulation; unit 3 consists of platy limestones almost devoid of identifiable biota. Trace element distributions indicate that depositional and early diagenetic conditions must have been reducing during deposition of unit 1 and, especially, unit 2, whereas they were much less reducing during deposition of unit 3. However, the latter does not contain body or trace fossils, with the exception of structures interpreted as calcified bacteria. The reasons why the apparently normal marine environment of unit 3 did not allow a normal biota to develop are explored and lead us to propose that: (i) unit 2 may be a Jurassic counterpart of modern kopara deposits (stromatolites of French Polynesian atolls); and (ii) unit 3 may be the result of palaeokopara reworking. This model invokes the extensive intervention of microbes in the formation of these carbonate deposits.     

Biofiltration of Pyridine by Shewanella putrefaciens in a Corn‐Cob Packed Biotrickling Filter

In this study, a new strain of microorganism Shewanella putrefaciens was used for biofiltration of a pyridine laden air stream in a corn‐cob packed biotrickling filter. In the biotrickling filter tested with S. putrefaciens, the maximum removal of pyridine is determined to be 100% at less than the average inlet concentration of 0.653 g m^–3 and more than 93% at a higher average inlet concentration of 1.748 g m^–3 (phase VIII) with an empty bed residence time (EBRT) of 106 s. However, when the biotrickling filter was operated at a low EBRT of 53 s and almost the same average inlet concentration of 1.752 g m^–3 (phase VII), the removal level attained was not greater than 85%. The maximum elimination capacity (EC) of the biotrickling filter was 102.34 g m^–3h^–1 at an inlet pyridine load of 119.62 g m^–3h^–1 with an EBRT of 53 s in phase VII. The maximum deviation of the EC from the 100% conversion line varied from 0.257 to 10.166% when going from phase I to VIII. Kinetic analysis showed that the maximum removal rate, r_max, and saturation constant, K_s, values for pyridine were calculated as 0.24 g m^–3h^–1 and 6.44 g m^–3, respectively, with a correlation coefficient, R², of 0.9939 and a standard deviation of error of 23.94%. The information contained herein indicates that the corn‐cob packed biotrickling filter inoculated by S. putrefaciens should provide excellent performance in the removal of gaseous pyridine.     

On board short-time high temperature heat treatment of ballast water: a field trial under operational conditions

A ballast water short-time high temperature heat treatment technique was applied on board a car-carrier during a voyage from Egypt to Belgium. Ballast water from three tanks was subjected for a few seconds to temperatures ranging from 55 degrees C to 80 degrees C. The water was heated using the vessel's heat exchanger steam and a second heat exchanger was used to pre-heat and cool down the water. The treatment was effective at causing mortality of bacteria, phytoplankton and zooplankton. The International Maritime Organization (IMO) standard was not agreed before this study was carried out, but comparing our results gives a broad indication that the IMO standard would have been met in some of the tests for the zooplankton, in all the tests for the phytoplankton; and probably on most occasions for the bacteria. Passing the water through the pump increased the kill rate but increasing the temperature above 55 degrees C did not improve the heat treatment's efficacy.     

Use of N stable isotope and microbial analyses to define wastewater influence in Mobile Bay, AL

We assessed short-term ecological and potential human health effects of wastewater treatment plant (WTP) effluent by measuring δ¹⁵N‰ and microbial concentrations in oysters and suspended particulate matter (SPM). We also tested male-specific bacteriophage (MSB) as an alternative to fecal coliforms, to assess potential influence of wastewater contamination on shellfish. WTP effluent did not affect oyster growth or survival, but SPM and oysters acquired wastewater-specific δ¹⁵N‰. δ¹⁵N values were depleted near the WTP, typical of low-level processed wastewater. Fecal coliform and MSB concentrations were higher in samples taken closest to the WTP, and MSB values were significantly correlated with δ¹⁵N‰ in oyster tissues. Overall, oysters demonstrated relatively rapid integration and accumulation of wastewater-specific δ¹⁵N‰ and indicator microorganisms compared to water samples. These data suggest oysters were superior sentinels compared to water, and MSB was a more reliable indicator of wastewater influence on shellfish than fecal coliforms.     

基于多种培养基和不同培养温度的马里亚纳海沟异养细菌多样性分析

马里亚纳海沟具有低温、高压、永久黑暗以及营养匮乏等深海环境特征,其中的细菌多样性对深海环境具有极为重要的作用.为研究马里亚纳海沟海水中异养细菌的物种多样性,采用多种培养基、不同培养温度同步筛选,单菌落16S rRNA基因序列鉴定,邻近法系统发育树构建分析等方法,对25个海水样品进行异养细菌多样性分析.共获得细菌531株...