Monitoring of coral communities in the inner Gulf of Thailand influenced by the elevated seawater temperature and flooding

There were two severe coral bleaching events at Ko Khang Khao, the inner Gulf of Thailand, occurred during the prolonged period of the elevated sea surface temperature (SST) in 2010 and low salinity as well as turbidity due to heavy flooding in 2011. The bleaching index (BI) and mortality index (MI) are calculated to compare the susceptibilities of coral species in the two bleaching events. The BI and MI vary significantly among the study sites and bleaching events. The most susceptible corals during both bleaching events are Acropora millepora, Pocillopora damicornis and Pavona decussate, while the most resistant species were Galaxea fascicularis, Fungia fungites, Pavona frondifera, Oulastrea crispate, and Symphyllia recta. The corals Favia favus, Goniopora columna, Platygyra pini, Symphyllia agaricia were relatively more tolerant to high SST but they are relatively more susceptible to low salinity. Coral bleaching is a phenomenon that the dissociation stress of the symbiotic relationship between zooxanthellae and their cnidarian host results in the reduction in photosynthetic pigment concentration. Among stressors, both prolonged exposure of high SST and low salinity, above and below their thresholds, respectively. The long-term resilience of coral communities at Ko Khang Khao and other coral communities close to the mouth of large rivers may depend on the frequency and duration of the exposure on the elevated SST due to atmospheric heating and low salinity due to river flooding.     

A study of coral reef resilience and implications of adaptive management and rehabilitation in Khanh Hoa Province, Vietnam

The Province of Khanh Hoa, Vietnam, is located in the western South China Sea and boasts a shoreline of 385 km and many islands. Previous studies have indicated the extreme diversity and abundance of coral reefs in its waters as compared with other coastal provinces of Vietnam. A study on the resilience of coral reefs against increased surface water temperature and anthropogenic impact is conducted at 19 reef sites in 2015. At each site, a series of parameters (e.g., coral covers, genus diversity, and coral recruitment, substratum heterogeneity, depth, water exchange level, and sediment deposit and water temperature) are measured quantitatively or semi-quantitatively. The measured data are rated based on the relationship between the parameter values and coral susceptibility; the consideration that reef health reflects the biological capability to adapt to environmental changes and the recruitment potential if bleached; and positive or negative influences of physical factors in the mitigation of thermal stress and protecting corals from bleaching. A cumulative analysis enables researchers to divide the studied reefs into four categories based on varying levels of reef health to support resilience, recovery, and vulnerability in the case of increased water temperature. Relevant management interventions for each category and other supporting activities are suggested to enhance management effectiveness and to plan the rehabilitation of coral reefs for biodiversity conservation and touristic development, taking into account the involvement of related stakeholders.     

南沙群岛珊瑚礁砾洲地貌特征

通过对南沙群岛永暑礁、西门礁和安达礁3个砾洲的现场调查,基于理论最低潮面和平均海面分别计算了砾洲的可能分布范围和平均出露范围,获得了砾洲的地形地貌特征。3个砾洲均为向西北凸出的弧形,呈北东-南西向展布。永暑礁和西门礁砾洲周边地势较高,中部相对低洼,分布有多条砾脊,边缘向海侧主砾脊高度最大,内部多条较低的次砾脊相交于主砾脊并汇聚于砾洲东部;安达礁砾洲则中部凸起地势较高,周边较低,无多重砾脊分布。推断砾洲的发育由最初珊瑚枝块堆积于中部形成凸起,逐渐向北东和南西两侧以砾脊形式扩展,最终形成砾洲由内向外的洼地-砾脊-砾滩的地貌分带模式。砾洲的地形地貌特征表明,南沙群岛砾洲的发育主要受北东-南西向水动力条件季节性交替的控制,反映了南海海区盛行季风的影响。南沙群岛珊瑚礁砾洲的地貌特征为深入研究南海珊瑚礁灰沙岛地貌发育演化及动力机制提供了基础数据。     

Towards new applications of underwater photogrammetry for investigating coral reef morphology and habitat complexity in the Myeik Archipelago,Myanmar

Photogrammetry represents a non-destructive, cost-effective tool for coral reef monitoring, able to integrate traditional remote sensing techniques and support researchers’ work. However, its application to submerged habitats is still in early stage. We present new ways to employ Structure from Motion techniques to infer properties of reef habitats. In particular, we propose the use of Digital Surface Models and Digital Terrain Models for assessing coral colonies extension and height and discriminating between seabed and coral cover. Such information can be coupled with digital rugosity estimates to improve habitat characterization. DTM, DSM and orthophotos were derived and used to compute a series of metrics like coral morphologies, reef topography, coral cover and structural complexity. We show the potentialities offered by underwater photogrammetry and derived products to provide useful basic information for marine habitat mapping, opening the possibility to extend these methods for large-scale assessment and monitoring of coral reefs.     

Deep-sea reef fish assemblage patterns on the Blake Plateau(Western North Atlantic Ocean)

Deep‐water coral habitats are scattered throughout slope depths (360–800 m) off the Southeastern United States (SEUS, Cape Lookout, North Carolina, to Cape Canaveral, Florida), contributing substantial structure and diversity to bottom habitats. In some areas (e.g. off North Carolina) deep corals form nearly monotypic (Lophelia pertusa) high profile mounds, and in other areas (e.g. off Florida) many species may colonize hard substrata. Deep coral and hard substrata ecosystems off the SEUS support a unique fish assemblage. Using the Johnson‐Sea‐Link submersible (in 2000–2005, 65 dives), and a remotely operated vehicle (in 2003, five dives), fishes were surveyed in nine deep reef study areas along the SEUS slope. Forty‐two benthic reef fish species occurred in deep reef habitats in these study areas. Species richness was greatest on the two coral banks off Cape Lookout, North Carolina (n = 23 and 27 species) and lowest on the two sites off Cape Canaveral, Florida (n = 7 and 8 species). Fish assemblages exhibited significantly (ANOSIM, Global R = 0.69, P = 0.001) different patterns among sites. Stations sampled off North Carolina (three study areas) formed a distinct group that differed from all dives conducted to the south. Although several species defined the fish assemblages at the North Carolina sites, Laemonema barbatulum, Laemonema melanurum, and Helicolenus dactylopterus generally had the most influence on the definition of the North Carolina group. Fish assemblages at three sites within the central survey area on the Blake Plateau were also similar to each other, and were dominated by Nezumia sclerorhynchus and L. melanurum. Synaphobranchus spp. and Neaumia sclerorhynchus differentiated the two southern sites off Cape Canaveral, Florida, from the other station groups. Combinations of depth and habitat type had the most influence on these station groups; however, explicit mechanisms contributing to the organization of these assemblages remain unclear.     

Microbial photosynthesis in coral reef sediments (Heron Reef, Australia)

We investigated microphytobenthic photosynthesis at four stations in the coral reef sediments at Heron Reef, Australia. The microphytobenthos was dominated by diatoms, dinoflagellates and cyanobacteria, as indicated by biomarker pigment analysis. Conspicuous algae firmly attached to the sand grains (ca. 100 μm in diameter, surrounded by a hard transparent wall) were rich in peridinin, a marker pigment for dinoflagellates, but also showed a high diversity based on cyanobacterial 16S rDNA gene sequence analysis. Specimens of these algae that were buried below the photic zone exhibited an unexpected stimulation of respiration by light, resulting in an increase of local oxygen concentrations upon darkening. Net photosynthesis of the sediments varied between 1.9 and 8.5 mmol O₂ m⁻² h⁻¹ and was strongly correlated with Chl a content, which lay between 31 and 84 mg m⁻². An estimate based on our spatially limited dataset indicates that the microphytobenthic production for the entire reef is in the order of magnitude of the production estimated for corals. Photosynthesis stimulated calcification at all investigated sites (0.2–1.0 mmol Ca²⁺ m⁻² h⁻¹). The sediments of at least three stations were net calcifying. Sedimentary N₂-fixation rates (measured by acetylene reduction assays at two sites) ranged between 0.9 to 3.9 mmol N₂ m⁻² h⁻¹ and were highest in the light, indicating the importance of heterocystous cyanobacteria. In coral fingers no N₂-fixation was measurable, which stresses the importance of the sediment compartment for reef nitrogen cycling.     

Spatial and temporal patterns of seagrass habitat use by fishes at the Ryukyu Islands,Japan

To investigate whether or not regional–temporal patterns of seagrass habitat use by fishes existed at the Ryukyu Islands (southern Japan), visual surveys were conducted in seagrass beds and adjacent coral reefs in northern, central, and southern Ryukyu Islands, in November 2004, and May, August, and November 2005, the northern region having less extensive seagrass beds compared with the central and southern regions. During the study period, the seagrass beds were utilized primarily by 31 species, the densities of some of the latter differing significantly among regions. With the exception of Apogonidae and Holocentridae, all species were diurnal and could be divided into 6 groups based on seagrass habitat use patterns; (1) permanent residents A (10 species, e.g. Stethojulis strigiventer), juveniles and adults living in seagrass beds as well as other habitats; (2) permanent residents B (5 species, e.g. Calotomus spinidens), juveniles and adults living only or mainly in seagrass beds; (3) seasonal residents A (4 species, e.g. Cheilodipterus quinquelineatus), juveniles living in seagrass beds as well as other habitats; (4) seasonal residents B (6 species, e.g. Lethrinus atkinsoni), juveniles living only or mainly in seagrass beds; (5) transients (5 species, e.g. Parupeneus indicus), occurring in seagrass beds in the course of foraging over a variety of habitats; and (6) casual species (1 species, Acanthurus blochii), occurring only occasionally in seagrass beds. Regarding temporal differences, juvenile densities in each group were high in May and August compared with November in each region, whereas adult densities did not differ drastically in each month. For regional differences, juvenile and adult densities of permanent residents A and B were higher in the southern and central regions than in the northern region. Moreover, some seasonal residents showed possible ontogenetic habitat shift from seagrass beds to coral reefs in each region. These results indicated that seagrass habitat use patterns by fishes changed temporally and regionally and there may be habitat connectivity between seagrass beds and coral reefs via ontogenetic migration in the Ryukyu Islands.     

Diurnal variability in turbidity and coral fluorescence on a fringing reef flat: Southern Molokai,Hawaii

Terrigenous sediment in the nearshore environment can pose both acute and chronic stresses to coral reefs. The reef flat off southern Molokai, Hawaii, typically experiences daily turbidity events, in which trade winds and tides combine to resuspend terrigenous sediment and transport it alongshore. These chronic turbidity events could play a role in restricting coral distribution on the reef flat by reducing the light available for photosynthesis. This study describes the effects of these turbidity events on the Hawaiian reef coral Montipora capitata using in situ diurnal measurements of turbidity, light levels, and chlorophyll fluorescence yield via pulse-amplitude-modulated (PAM) fluorometry. Average surface irradiance was similar in the morning and the afternoon, while increased afternoon turbidity resulted in lower subsurface irradiance, higher fluorescence yield (ΔF/F_m^′), and lower relative electron transport rates (rETR). Model calculations based on observed light extinction coeffecients suggest that in the absence of turbidity events, afternoon subsurface irradiances would be 1.43 times higher than observed, resulting in rETR for M. capitata that are 1.40 times higher.     

Gradients in coral reef communities exposed to muddy river discharge in Pohnpei,Micronesia

This study analyzed how coral communities change along a gradient of increasing exposure to a mud-discharging river in the Enipein Catchment, Pohnpei, Micronesia. Using video transects, we quantified benthic communities at five sites along a gradient moving away from the river mouth towards the barrier reef. The most river-impacted site was characterized by a high accumulation of mud, low coral cover and low coral diversity. Although coral cover leveled off at ∼400 m from the river mouth to values found at the outer-most sites, coral diversity continued to increase with increasing distance, suggesting that the most distant site was still impacted by the river discharges. Fungiidae, Pavona, Acropora, Pachyseris and Porites rus all significantly increased in cover with distance from the river, while Turbinaria decreased. The combined presence and abundance of these six species groups, together with coral species richness, may help to indicate the effects of terrestrial runoff in similar runoff-exposed settings around Micronesia, whereas coral cover is not a sensitive indicator for river impact. Coral reefs are important resources for the people of Pohnpei. To prevent further degradation of this important resource, an integrated watershed approach is needed to control terrestrial activities.     

Climate change and coral reef bleaching: An ecological assessment of long-term impacts,recovery trends and future outlook

Since the early 1980s, episodes of coral reef bleaching and mortality, due primarily to climate-induced ocean warming, have occurred almost annually in one or more of the world's tropical or subtropical seas. Bleaching is episodic, with the most severe events typically accompanying coupled ocean–atmosphere phenomena, such as the El Niño-Southern Oscillation (ENSO), which result in sustained regional elevations of ocean temperature. Using this extended dataset (25+ years), we review the short- and long-term ecological impacts of coral bleaching on reef ecosystems, and quantitatively synthesize recovery data worldwide. Bleaching episodes have resulted in catastrophic loss of coral cover in some locations, and have changed coral community structure in many others, with a potentially critical influence on the maintenance of biodiversity in the marine tropics. Bleaching has also set the stage for other declines in reef health, such as increases in coral diseases, the breakdown of reef framework by bioeroders, and the loss of critical habitat for associated reef fishes and other biota. Secondary ecological effects, such as the concentration of predators on remnant surviving coral populations, have also accelerated the pace of decline in some areas. Although bleaching severity and recovery have been variable across all spatial scales, some reefs have experienced relatively rapid recovery from severe bleaching impacts. There has been a significant overall recovery of coral cover in the Indian Ocean, where many reefs were devastated by a single large bleaching event in 1998. In contrast, coral cover on western Atlantic reefs has generally continued to decline in response to multiple smaller bleaching events and a diverse set of chronic secondary stressors. No clear trends are apparent in the eastern Pacific, the central-southern-western Pacific or the Arabian Gulf, where some reefs are recovering and others are not. The majority of survivors and new recruits on regenerating and recovering coral reefs have originated from broadcast spawning taxa with a potential for asexual growth, relatively long distance dispersal, successful settlement, rapid growth and a capacity for framework construction. Whether or not affected reefs can continue to function as before will depend on: (1) how much coral cover is lost, and which species are locally extirpated; (2) the ability of remnant and recovering coral communities to adapt or acclimatize to higher temperatures and other climatic factors such as reductions in aragonite saturation state; (3) the changing balance between reef accumulation and bioerosion; and (4) our ability to maintain ecosystem resilience by restoring healthy levels of herbivory, macroalgal cover, and coral recruitment. Bleaching disturbances are likely to become a chronic stress in many reef areas in the coming decades, and coral communities, if they cannot recover quickly enough, are likely to be reduced to their most hardy or adaptable constituents. Some degraded reefs may already be approaching this ecological asymptote, although to date there have not been any global extinctions of individual coral species as a result of bleaching events. Since human populations inhabiting tropical coastal areas derive great value from coral reefs, the degradation of these ecosystems as a result of coral bleaching and its associated impacts is of considerable societal, as well as biological concern. Coral reef conservation strategies now recognize climate change as a principal threat, and are engaged in efforts to allocate conservation activity according to geographic-, taxonomic-, and habitat-specific priorities to maximize coral reef survival. Efforts to forecast and monitor bleaching, involving both remote sensed observations and coupled ocean–atmosphere climate models, are also underway. In addition to these efforts, attempts to minimize and mitigate bleaching impacts on reefs are immediately required. If significant reductions in greenhouse gas emissions can be achieved within the next two to three decades, maximizing coral survivorship during this time may be critical to ensuring healthy reefs can recover in the long term.