Studies on the edwardsiellosis and characterization of pathogenic bacteria from diseased flounder (Paralichthys olivaceus L.) and turbot (Scophthalmus maximus L.)

1IntroductionEdwardsiellahas been recognized as a world-wide-occurring pathogen of numerous marine fishspecies,and edwardsiellosis has been recorded in adiverse array of fish species,including chinooksalmonOncorhynchus tshawytschaL.(Amandi etal.,1982),cha…     

洞庭湖和鄱阳湖水体细菌空间分布特征及驱动机制

为了探讨洞庭湖和鄱阳湖水体细菌的群落组成、空间分布特征及其驱动机制,于2017年9月,采用高通量测序技术、基于16S rRNA分子标记进行单分子测序,分别对两湖共57个位点的水体细菌群落组成进行了研究,同步监测了水体的理化指标。结果表明：洞庭湖和鄱阳湖共发现水体细菌20门42纲93目191科533属,在门水平上,洞庭湖和鄱阳湖的水体细菌组成均以放线菌门、蓝细菌门和变形菌门为主;主成分分析结果表明,两湖水环境条件有显著性差异,鄱阳湖的空间差异性大于洞庭湖;Mantel分析表明显著影响蓝细菌类群和其他类群组成的因素较为一致,在洞庭湖以物理环境因子和营养盐因子为主,而鄱阳湖以物理环境因子为主;零模型分析结果显示随机性过程为两湖水体细菌的群落构建机制的主要成分,占比分别为58.8%和79.7%。总体来说,鄱阳湖水环境空间异质性更高,水体细菌受到一些水文水动力学因子介导的物理环境因子影响,且其群落构建机制由随机性过程主导;洞庭湖水环境空间异质性较低,水体细菌受到物理环境因子和营养盐因子的共同影响,其群落构建机制由随机性过程和确定性过程共同决定。认识两湖水体细菌在空间上的分布及影响因素差异,对两湖...     

长江口及邻近海域表层海水细菌多样性及群落结构

从长江口及邻近海域10 个站点采集表层海水, 通过DAPI 染色计数和克隆文库构建的方法, 对细菌的多样性及群落结构进行初步研究。DAPI 染色计数结果显示长江口及邻近海域表层海水中 细菌丰度总体较高, 生物量变化较大, 从1.16×10⁵(A04 站点)到 1.48×10⁶ cells/mL (B03 站点); 总体 趋势从长江口向外海增加。细菌克隆文库的系统发育分析表明: 细菌序列以变形菌门为主(占总文库 的60.61%), 其中α-变形菌纲是绝对优势类群(50.62%); 其次是拟杆菌门(15.18%)、放线菌门(14.79%) 和蓝细菌门(4.61%), 还有少量厚壁菌门、绿弯菌门、酸杆菌门、浮霉菌门、纤维杆菌门、疣微菌门 等; 另外柔膜菌门和SAR 类群也有发现。文库多样性分析结果显示长江口及邻近海域部分站点表层 海水中细菌多样性显著, 与研究区海域水产养殖活动有关, 并受到区域洋流和海洋化学环境(如低氧 带)的影响。     

三苯基氯化锡(TPTC)对孔石莼光合作用及生长的影响

于１９９５年５月在青岛太平角采集孔石莼,研究了三苯基氯化锡（ＴＰＴＣ）对其光合、呼吸、色素含量及生长的影响。结果表明,低浓度的ＴＰＴＣ≤２μｇ／Ｌ）对光 过程无明显作用,高浓度的ＴＰＴＣ（〉２μｇ／Ｌ）能抑制光合作用,当ＴＰＴＣ浓度达到１６μｇ／Ｌ时,光合过程基本停止,ＴＰＴＣ对光作用的半数效应浓度为９６ｈＥＣ５０＝７．３９μＧ／Ｌ。低浓度的ＴＰＴＣ就能够使呼吸速率加快,但ＴＰＴＣ浓度达到８μｇ／     

利用遥感技术估算南海北部表层异养细菌丰度

常规异养细菌监测方法精度高但费时费力且不能连续观测, 而卫星遥感成本低、可以大面积同步、长时间周期观测, 可与常规方法互补。文章利用南海北部10个航次采集的表层异养细菌丰度和卫星遥感反射率, 采用统计回归的方法建立了异养细菌丰度的遥感模型, 其模型决定系数为0.81, 均方根误差为2.44×10⁸个·L^-1, 平均相对误差为21%, 具有较好表现。利用该模型估算南海北部表层异养细菌丰度, 结果显示: 从珠江河口到南海北部开阔海域, 异养细菌丰度逐渐减小。夏季河口地区平均异养细菌丰度最高, 春季最低; 近岸海域靠近珠江河口西侧的平均异养细菌丰度高于东侧; 冬季陆架地区平均异养细菌丰度最高, 夏季最低; 开阔海域的异养细菌丰度变化幅度较小。     

Geochemical characterisation of organic matter in Keg River Formation (Elk point group, Middle Devonian), La Crete Basin, Western Canada

Carbonates from the Keg River Formation, La Crete Basin, Alberta, western Canada were examined in order to define: (a) oil source rock potential; (b) bulk maceral composition; (c) extract yield; and finally (d) facies variations using PY-GC-MS. Thirty samples from 6 different wells were examined from the lower Keg River member and 4 from the upper Keg River member using conventional geochemical methods. As maturity differences are absent within the sample set, variations in TOC, T_max, hydrogen index, organic petrography and extract yields are caused by variability in organic matter input, which is revealed by molecular characterisation using PY-GC-MS. Lower Keg River member bituminous wackestones are excellent potential source rocks containing Types I–II and Type II organic matter. Types I–II organic matter contains large well preserved (up to 200μm in diameter) thick-walled Tasmanites (10–15% of sample) and akinete algal cells indicative of algal blooms within an amorphous bituminite. Type II organic matter contains a higher proportion of degraded alginites/bituminite relative to well-preserved alginites. Extract yields (mg/g TOC) were seen to increase from Types I–II to Type II organic matter. PY-GC-MS revealed that 1,2,3,4-tetramethylbenzene was a major peak in most samples. This is a pyrolysis product arising from β-cleavage of C₄₀ diaromatic carotenoids incorporated within the kerogen during diagenesis. The source of this compound is thought to be from an unknown diaromatic compound with a 2,3,6-/3,4,5-trimethyl substitution pattern and isorenieratene, which is specific to photosynthetic green sulphur bacteria (Chlorobiaceae) suggesting that the photic zone was at least partially anoxic during deposition of these samples. The relative abundance of this compound/n-C11-alkene and organic sulphur (calculated from the thiophene ratio) both increase from Types I–II to Type II organic matter. This trend was grossly similar to the trend seen in the variability of extract yield with hydrogen index. A similar trend for HI and T_max indicates samples containing a higher proportion of degraded alginites/bituminite relative to well-preserved alginite are more labile than Type I–II organic matter. Upper Keg River member marls contain Type II organic matter, which is characterised by heavily degraded algal material within a bituminous groundmass. Pyrolysates of two of the marl samples contain only low amounts of 1,2,3,4-tetramethylbenzene, in contrast to the bituminous wackestones, indicating that the depositional environment/source input was different during deposition of the marl samples. Although both marls contain similar organic matter, their pyrolysates were significantly different. One marl (1141.9 m) was highly paraffinic containing dominantly short-chain alkene/alkane doublets, while the other marl (1137.6 m) contained a bimodal n-alkane/alkene distribution and high amounts of alkylphenols, which may be derived from preservation of resistant algal polyphenolic molecules or suggest a terrestrial input.     

珠江口外近海沉积有机质化学及稳定同位素组成的早期成岩改变

理解早期成岩过程中有机质的化学和同位素分馏对于研究海洋和湖泊环境中的生物地球化学过程是很重要的。将珠江口外近海生物成因有机质分为可水解氨基酸、碳水化合物、脂类和酸不溶四个部分,分析了有机质的化学和同位素组成(δ13C,δ15N),借以讨论沉积有机质在埋藏的早期成岩过程中所发生的化学和同位素改变,结果表明,从浮游生物→悬浮颗粒物→表层沉积物→沉积柱内部,易降解组分可水解氨基酸、碳水化合物、脂类占样品总有机碳的份额依次降低。沉积物及四个有机部分的稳定碳同位素组成在纵向上随深度保持相对恒定,而在不同有机部分之间差异明显。不同类型有机物的分解速率差异在改变有机质化学成分的同时,导致其δ13C发生小幅度负向漂移;细菌有机质的形成和分解对有机质化学成分和同位素组成演化也有重要贡献,并且在一定程度上抵消了上述δ13C的负向漂移,其结果导致沉积有机质的δ13C略低于浮游生物;另一方面,由于异养菌生长过程中的氮同位素分馏系数与可利用氮源的特征和培养基的性质等多种因素有关,导致沉积物的δ15N变化范围增大。在这里δ13C可以可靠地指示该海域沉积有机质的来源,而δ15N变化范围较大且规律不明显,难以用作沉积有机质来源的指示。     

一株海洋几丁质酶产生菌的筛选及其产酶条件的初步研究

从胶州湾的海泥中分离到一株几丁质酶高产菌株。经16SrDNA序列分析,认为该菌属于假交替单胞菌(Pseudoaltermonas),并将其命名为SS01。对该菌产几丁质酶的最佳培养条件进行了研究,发现与其它几丁质酶产生菌相比,SS01菌株的最适产酶温度较低,酶活较高。在Zobell2216E培养基中,SS01菌株培养9h进入稳定期。胶体几丁质可诱导该菌几丁质酶的产生。在几丁质培养基中,SS01菌株产酶的适宜条件是:培养温度24℃,培养基起始pH7.0左右,蛋白胨为N源(5g/L),胶体几丁质为C源(5g/L),170r/min振荡培养130h,酶活可达116.2U/mL。     

Disturbance of meromixis in saline Lake Shira (Siberia,Russia): Possible reasons and ecosystem response

Saline Lake Shira (Southern Siberia, Russia) was meromictic through the observation period 2002–2015. During the under-ice periods of 2015 and 2016, complete mixing of the water column was recorded for the first time, and hydrogen sulphide temporarily disappeared from the water column of the lake; i.e. in those years the lake turned to holomixis. In the summer of 2015, a sharp increase in chlorophyll a, organic carbon, zooplankton, and phytoflagellates was observed in the lake, which was probably due to the release of nutrients from the monimolimnion. Purple sulfur bacteria completely disappeared from the lake after the first mixing in 2015, and did not reappear despite the restoration of meromixis in 2017. Thus, it was demonstrated that purple sulfur bacteria are sensitive to the weakening of the stratification of Lake Shira. Based on the data of the seasonal monitoring of temperature and salinity profiles over the period 2002–2017, it was presumed that the main cause of deep mixing in 2015 was the weakening of the salinity gradient due to strong wind impact and early ice retreat in the spring of 2014. In addition, it was shown that in previous years a significant contribution to the maintenance of meromixis was made by an additional influx of fresh water, which caused a rise in the lake level in the period 2002–2007. Thus, we identified a relationship between the stratification regime of the lake and the change in its level, which provides valuable information both for the forecast of water quality and for reconstruction of the Holocene climate humidity in this region of Southern Siberia from the sediment cores of Lake Shira.     

Diel tuning of photosynthetic systems in ice algae at Saroma-ko Lagoon, Hokkaido, Japan

Ice algae are the major primary producers in seasonally ice-covered oceans during the cold season. Diurnal change in solar radiation is inevitable for ice algae, even beneath seasonal sea ice in lower-latitude regions. In this work, we focused on the photosynthetic response of ice algae under diurnally changing irradiance in Saroma-ko Lagoon, Japan. Photosynthetic properties were assessed by pulse-amplitude modulation (PAM) fluorometry. The species composition remained almost the same throughout the investigation. The maximum electron transport rate (rETR_max), which indicates the capacity of photosynthetic electron transport, increased from sunrise until around noon and decreased toward sunset, with no sign of the afternoon depression commonly observed in other photosynthetic organisms. The level of non-photochemical quenching, which indicates photoprotection activity by dissipating excess light energy via thermal processes, changed with diurnal variations in irradiance. The pigment composition appeared constant, except for xanthophyll cycle pigments, which changed irrespective of irradiance. These results indicate that ice algae tune their photosynthetic system harmonically to achieve efficient photosynthesis under diurnally changing irradiance, while avoiding damage to photosystems. This regulation system may be essential for productive photosynthesis in ice algae.