cDNA cloning and expression of a cytochrome P450 1A (CYP1A) gene from the hermaphroditic fish Rivulus marmoratus

We previously described the genomic structure of the cytochrome P450 1A (CYP1A) gene from the hermaphroditic fish Rivulus marmoratus [Kim, I.-C., Kim, Y.J., Yoon, Y.-D, Kawamura, S., Lee, Y.-S., Lee, J.-S., 2004a. Cloning of cytochrome P450 1A (CYP1A) genes from the hermaphroditic fish Rivulus marmoratus and the Japanese medaka Oryzias latipes. Mar. Environ. Res. 58, 125–129]. To further characterize R. marmoratus CYP1A, we cloned the cDNA sequence of a CYP1A gene from this species and also expressed its recombinant protein in an E. coli system. We exposed R. marmoratus to 4-nonylphenol, and found a small induction of CYP1A mRNA in the treated animals. In this paper, we discuss the characteristics of R. marmoratus CYP1A gene as well as its potential use in a biomonitoring assay.     

Geochemistry constraints of Mesozoic–Cenozoic calc-alkaline magmatism in the South Shetland arc, Antarctica

Geochemical data from basalts, basaltic andesites, and andesites of the Mesozoic–Cenozoic (143–44 Ma) from Livingston, Greenwich, Robert, King George, and Ardley Islands of the South Shetland archipelago, Antarctica, are presented. The rocks have variable SiO₂ of approximately 46–61 wt%, Al₂O₃ of 15–26 wt%, and total alkali (K₂O+Na₂O) of 2–6 wt%. Most samples have low Mg#, Cr, and Ni, which indicates that they have undergone significant fractional crystallization from mantle-derived melts. The presence of olivine cumulatic in the samples from Livingston and Robert Islands explains some high MgO, Ni, and Cr values, whereas low Rb, Zr, and Nb values could be related to undifferentiated magmas. N-MORB-normalized trace element patterns show that South Shetland Islands volcanic rocks have a geochemical pattern similar to that found for other island arcs, with enrichment in LILE relative to HFSE and in LREE relative to HREE. The geochemistry pattern and presence of calcic plagioclase, orthopyroxene, Mg-olivine, and titanomagnetite phenocrysts suggest a source related to the subduction process. The geochemical data also suggest magma evolution from the tholeiitic to the calc-alkaline series; some samples show a transitional pattern. Samples from the South Shetland archipelago show moderate LREE/HREE ratios relative to N-MORB and OIB, depletion in Nb relative to Yb, and high Th/Yb ratios. These patterns probably reflect magma derived from a lithospheric mantle source previously modified by fluids and sediments from a subduction zone.

Resumo

Dados geoquímicos de basaltos, andesitos basálticos e andesitos mesozóicos–cenozóicos (143–44 Ma) das ilhas Livingston, Greenwich, Robert, King George e Ardley do Arquipélago Shetland do Sul, Antártica são discutidas neste artigo. As rochas tem conteúdos de SiO₂ variando de 46 a 61%, Al₂O₃ de 15 a 26% e álcalis (K₂O+Na₂O) de 2 a 6%. A maior parte das amostras tem conteúdos baixos de Mg#, Cr e Ni, indicando que sofreram significante cristalização fracionada de fusões derivadas do manto. A presença de fases cumuláticas nas amostras das ilhas Livingston e Robert explicaria os elevados valores de MgO, Ni, Cr, enquanto que baixos valores de Rb, Zr e Nb observados nas amostras destas ilhas poderiam estar relacionados a magmas não diferenciados. Os padrões de elementos-traço normalizados pelo N-MORB mostram que as rochas vulcânicas das Ilhas Shetland do Sul têm padrão geoquímico similar àqueles encontrados em outros arcos de ilhas com enriquecimento em LILE em relação aos HFSE e em ETRL em relação aos ETRP. O padrão geoquímico e a ocorrência de fenocristais de plagioclásio cálcico, ortopiroxênio, olivina magnesiana e titanomagnetita sugerem origem relacionada a processos de subducção. Dados geoquímicos obtidos para as amostras do arquipélago Shetland do Sul sugerem um magma evoluindo de toleítico para cálcico-alcalino, observando-se em algumas amostras um padrão transicional. As amostras do arquipélago Shetland do Sul mostram em relação ao N-MORB e OIB, moderadas razões ETRL/ETRP, empobrecimento em Nb relativo a Yb e elevada razão Th/Yb Estes padrões refletem, provavelmente, magma derivado de uma fonte mantélica litosférica, que foi modificada por fluídos e sedimentos da zona de subducção.     

δ34S isotope values of dissolved sulfate (SO4 2−) as a tracer for battery acid (H2SO4) contamination in groundwater

The application of sulfur isotope (³⁴S) values of sulfate in groundwater provided the information necessary to evaluate the source, transport and fate of battery acid and associated contaminants at the Gulf Coast Recycling (GCR) facility. The chemical and isotopic composition of groundwater beneath the (GCR) property, a battery recycling facility in east Tampa, Florida, varies more than expected for an area of comparable size. Sulfate (SO₄^2–) values, for example, range from 1.2 to 11,500 mg/L and oxygen and hydrogen isotopes do not attenuate towards the weighted annual mean. Those samples that are high in sulfate generally have a low pH, which immediately indicates battery acid (H₂SO₄) contamination as a potential source for the sulfate. The low pH and high reactivity of the sulfuric acid groundwater cause the formation of hydrogeological microenvironments due to preferential dissolution of carbonate minerals, which in turn causes enhanced recharge and groundwater flow in certain areas; thus, the extreme scatter in the data set. Because of the difficult hydrogeology it is not straightforward to delineate the point-sources of contamination and up to five potential scenarios have to be evaluated: (1) seawater intrusion, (2) upwelling of high-sulfate groundwater, (3) local dissolution of gypsum, (4) an up-gradient contaminant source to the northeast of the GCR property and (5) battery acid contamination.     

An integrated linear/non-linear flow model for the conduit-fissure-pore media in the karst triple void aquifer system

Most karstic aquifer media may be characterized as the triple-void media with highly-varied hydraulic properties, including matrix pore, fissure and conduit, in which liner flow may co-exist with non-linear flow. In this paper, an attempt is made to couple linear flow with non-linear flow in a single unified flow governing equations by introducing the concept of equivalent hydraulic conductivity (EHC) and deriving a general Darcys law for various flow. The expression of EHC in the karst conduit and fissure are also derived. The procedures of numerical implementation are demonstrated via an ideal model and a case study of karst aquifer system in the Beishan Ore Formation area, Guangxi Autonomous Region, China.     

High-Resolution Observations in B1-IRS: Ammonia, Ccs and Water Masers

We present a study of the structure and dynamics of the star-forming region B1-IRS (IRAS 03301+3057) using the properties of different molecules at high angular resolution (4). We have used VLA observations of NH₃, CCS, and H₂O masers at 1 cm. CCS emission shows three clumps around the central source, with a velocity gradient from red to blue-shifted velocities towards the protostar, probably due to the interaction with outflowing material. Water maser emission is elongated in the same direction as a reflection nebula detected at 2 m by 2MASS, with the maser spots located in a structure of some hundreds of AU from the central source, possibly tracing a jet. We propose a new outflow model to explain all our observations, consisting of a molecular outflow near the plane of the sky. Ammonia emission is extended and anticorrelated with CCS. We have detected for the first time this anticorrelation at small scales (1400 AU) in a star-forming region.     

Emplacement mechanisms of the South Kona slide complex,Hawaii Island: sampling and observations by remotely operated vehicle Kaiko

Emplacement of a giant submarine slide complex, offshore of South Kona, Hawaii Island, was investigated in 2001 by visual observation and in-situ sampling on the bench scarp and a megablock, during two dives utilizing the Remotely Operated Vehicle (ROV) Kaiko and its mother ship R/V Kairei. Topography of the bench scarp and megablocks were defined in 3-D perspective, using high-resolution digital bathymetric data acquired during the cruise. Compositions of 34 rock samples provide constraints on the landslide source regions and emplacement mechanisms. The bench scarp consists mainly of highly fractured, vesiculated, and oxidized aa lavas that slumped from the subaerial flank of ancestral Mauna Loa. The megablock contains three units: block facies, matrix facies, and draped sediment. The block facies contains hyaloclastite interbedded with massive lava, which slid from the shallow submarine flank of ancestral Mauna Loa, as indicated by glassy groundmass of the hyaloclastite, low oxidation state, and low sulfur content. The matrix facies, which directly overlies the block facies and is similar to a lahar deposit, is thought to have been deposited from the water column immediately after the South Kona slide event. The draped sediment is a thin high-density turbidite layer that may be a distal facies of the Alika-2 debris-avalanche deposit; its composition overlaps with rocks from subaerial Mauna Loa. The deposits generated by the South Kona slide vary from debris avalanche deposit to turbidite. Spatial distribution of the deposits is consistent with deposits related to large landslides adjacent to other Hawaiian volcanoes and the Canary Islands.     

Composition and assemblage characteristics of magnetic minerals in layer S<Subscript>5-1</Subscript> of Xifeng and Duanjiapo sections

Relatively strongly magnetic fine components (< 30μm, XS-4J and DS-4J) which are most environmentally sensitive were separated from layer S_5-1 in the Xifeng and Duanjiapo loess sections and analyzed by MPV-3 for their morphometric characteristics and reflectance, SEM-ESD for their element contents and XRD for their mineral phases, respectively. The results showed that minerals in both samples are dominated by detrial Fe-Ti oxides of aeolian origin. In sample XS-4J the reflectance and iron contents of magnetic minerals are usually high. In addition to magnetite (Fe₃O₄), maghemite (γFe₂O₃) and hematite (Fe₂O₃), some Fe-high oxide (72.25 wt%–86.67 wt%), ilmenite (FeTiO₃), and magnetite-ulvöspinel [Fe(FeCr)O₄, Fe (FeNi)O₄] were also detected. In sample DS-4J obvious negative linear correlations were found between Ti and Fe, and the contents of Mn, Si, Al and Ca are usually high and the minerals are dominated by magnetite (maghemite), goethite (FeOOH) and limonite (containing Si and OH). In addition, the signs of corrosion of magnetic minerals and newly crystallized magnetite (maghemite) were recognized. Differences in the composition and assemblage characteristics of magnetite minerals between XS and DS reflect significant differences in source rocks and preserving conditions.     

Noril’sk–Talnakh Cu–Ni–PGE deposits: a revised tectonic model

The Norilsk mining district is located at the northwest margin of the Tunguska basin, in the centre of the 3,000×4,000 km Siberian continental flood basalt (CFB) province. This CFB province was formed at the Permo-Triassic boundary from a superplume that ascended into the geometric centre of the Laurasian continent, which was surrounded by subducting slabs of oceanic crust. We suggest that these slabs could have reached the core–mantle boundary, and they may have controlled the geometric focus of the superplume. The resulting voluminous magma intruded and erupted in continental rifts and related extensive flood basalt events over a 2–4 Ma period. Cu–Ni–PGE sulfide mineralization is found in olivine-bearing differentiated mafic intrusions beneath the flood basalts at the northwestern margin of the Siberian craton and also in the Taimyr Peninsula, some 300 km east of a triple junction of continental rifts, now buried beneath the Mesozoic–Cenozoic sedimentary basin of western Siberia. The Norilsk-I and Talnakh-Oktyabrsky deposits occur in the Norilsk–Kharaelakh trough of the Tunguska CFB basin. The Cu–Ni–PGE-bearing mineralized intrusions are 2–3 km-wide and 20 km-long differentiated chonoliths. Previous studies suggested that parts of the magma remained in intermediate-level crustal chambers where sulfide saturation and accumulation took place before emplacement. The 5–7-km-thick Neoproterozoic to Palaeozoic country rocks, containing sedimentary Cu mineralization and evaporites, may have contributed additional metal and sulfur to this magma. Classic tectonomagmatic models for these deposits proposed that subvertical crustal faults, such as the northeast-trending Norilsk–Kharaelakh fault, were major trough-parallel conduits providing access for magmas to the final chambers. However, geological maps of the Norilsk region show that the Norilsk–Kharaelakh fault offsets the mineralization, which was deformed into folds and offset by related reverse faults, indicating compressional deformation after mineralization in the Late Triassic to Early Jurassic. In addition, most of the intrusions are sills, not dykes as should be expected if the vertical faults were major conduits. A revised tectonic model for the Norilsk region takes into account the fold structure and sill morphology of the dominant intrusions, indicating a lateral rather than vertical emplacement direction for the magma into final chambers. Taking into account the fold structure of the country rocks, the present distribution of the differentiated intrusions hosting the Norilsk-I and Talnakh–Oktyabrsky deposits may represent the remnants of a single, >60 km long, deformed and eroded palm-shaped cluster of mineralized intrusions, which are perceived as separate intrusions at the present erosional level. The original direction of sill emplacement may have been controlled by a northeast-trending paleo-rise, which we suggest is present at the southeastern border of the Norilsk–Kharaelakh trough based on analysis of the unconformity at the base of the CFB. The mineralized intrusions extend along this rise, which we interpret as a structure that formed above the extensionally tilted block in the metamorphic basement. Geophysical data indicate the presence of an intermediate magma chamber that could be linked with the Talnakh intrusion. In turn, this T-shaped flat chamber may link with the Yenisei–Khatanga rift along the northwest-trending Pyasina transform fault, which may have served as the principal magma conduit to the intermediate chamber. It then produced the differentiated mineralized intrusions that melted through the evaporites with in situ precipitation of massive, disseminated, and copper sulfide ore. The Norilsk–Kharaelakh crustal fault may not relate to mineralization and possibly formed in response to late Mesozoic spreading in the Arctic Ocean.Editorial handling: P. Lightfoot     

The eastern continuation of the Cadomian orogen: U–Pb zircon evidence from Saxo-Thuringian granitoids in south-western Poland and the northern Czech Republic

We report U–Pb single zircon ages from three pre-Variscan granitoids in the NE part of the Bohemian Massif. The Platerówka granodiorite from the Lausitz-Izera Unit, the Polish Sudetes, has been dated at 533±9 Ma. The Bitouchov granite form the SW part of the South Krkonoe Unit, the Czech Sudetes, gave an age of 540+11/–10 Ma, and the Wdroe granodiorite in the Fore-Sudetic Block yielded 548±9 Ma. All these latest Vendian/Early Cambrian granitoids represent the post-tectonic expression of a late Proterozoic Cadomian orogenic cycle and demonstrate the eastward extent of the Cadomian basement into the Variscan orogen. Granodiorites of similar age have so far been reported from Brittany and especially from the Saxo-Thuringian Terrane to the NE and SW of the Elbe Fault Zone. We conclude that the Saxo-Thuringian Terrane extends across the Elbe and Sudetic Marginal Fault Zones into the Fore-Sudetic Block.     

Effects of the number of stations and time resolution on derivation

For at least 30 years now it has been well known that the Dst index can be modelled using the solar wind as input. Since then, many attempts have been made to improve the predictability of Dst using different approaches. These attempts are useful, for instance, to understand which features of the solar wind–magnetosphere interactions are most important in producing magnetospheric activity and how the Dst index would improve the space weather forecast. The Dst index is by far the most reliable and simple indication that a magnetic storm is in progress. In this work, the effect of using more than four magnetic stations and shorter time intervals than the hourly averages used in Sugiura's procedures is evaluated. The discussion is based on the results presented by Burton in 1975 and Feldstein in 1984 considering 4 or 12 magnetic stations and time averages of 2.5 min for a magnetic disturbed period that occurred from February 7–28, 1967, including two geomagnetic storms. The analysis has shown that the global representation of a magnetic storm by the standard Dst (Sugiura) is well preserved either using 4, 6, 12 magnetic stations or using 1 h, 2.5 min 1 min averages. A brief review of the current understanding of Dst has been included to support the discussions. The analysis performed has shown that a more refined Dst index (time and number of stations>4) would be useful to investigate the intrinsic processes and the different current systems involved in the ring current development during magnetic storms; the standard Dst, as it is conceived, is quite adequate to monitor geomagnetic storms and identify their overall features; concerning the magnetic stations normally considered, the inclusion of higher magnetic latitude stations (>35) may underestimate the observed Dst.