中国花鲈细胞色素b基因片段的序列研究(英文)

参考鳗鲡等鱼类线粒体 DNA序列进行了中国花鲈线粒体 DNA细胞色素 b基因片断的引物设计、PCR扩增及其序列测定。得到中国花鲈的碱基序列为 4 10 bp,其 A、T、G、C含量分别为 10 1bp(2 4 .6 3% )、112 bp(2 7.32 % )、72 bp(17.56 % )、12 5bp(30 .4 9% ) ,与鳗鲡等其他鱼类相同基因片断序列碱基含量相似。     

Application of the first internal transcribed spacer(ITS-1) of ribosomal DNA as a molecular marker to population analysis in farrer''s scallop Chlamys farreri

Sequence variation of the first internal transcribed spacer of ribosomal DNA （ ITS - 1 ） was examined and its application to the study of genetic variation was explored in four populations of farter＇ s scallop Chlamys farreri. ITS - 1 fragments, with a length of about 300 bp,of 78 individuals collected from Dalian, Qingdao, Yantai in China and Korea respectively were amplified via PCR, cloned and sequenced. Intra-genomic variation was examined by sequencing several clones of single individuals. Alignment and polymorphism analysis detected 44 haplotypes and 50 polymorphic sites which consist of 30 substitutions and 20 indels, indicating a high level of polymorphisms. Sequence analysis also showed a very low level of intra-individual variation. All these features validated the feasibility of application of ITS - 1 fragment to population analysis. Polymorphism analysis showed that the Korea sample has the richest genetic variation, followed by Yantai and Qingdao samples. AMOVA （analysis of molecular variance） showed that the majority （96.26%） of genetic variation was distributed within populations and 3.74% resulted from among populations, but with P 〈 0.05 （ = 0.042）, indicating that the populations in this study have significant divergence. This output was basically concordant with the result arising from RAPD data and different from that from mitochondrial 16S rDNA sequence data. Discussion on this inconsistency was made accordingly.     

3种蛏类线粒体16SrRNA和COI基因片段的序列比较及其系统学初步研究

对3种蛏类大竹蛏（Solen grandis），长竹蛏（Solen strictus）和小刀蛏（Cultellus attenuatus）的线粒体16SrRNA和COI基因片段序列进行了比较并对其系统学进行了初步研究。得到的序列总长度分别为472-481bp（16S）和658bp（COI）。3种蛏序列的碱基组成均显示出较高的A＋T比例（16SrRNA基因62．1％；COI基因62．8％）。对位排序比较表明，16SrRNA片段种内个体间变异较小，3种类间存在128个碱基变异位点（其中包括127个简约信息位点）和5个插入／缺失位点，总共12个碱基长；COI片段有200个碱基存在变异，其中包括191个简约信息位点，不存在任何插入／缺失位点。数据分析结果表明16SrRNA和COI基因片段大竹蛏与长竹蛏两片段的遗传距离分别为0．0856和0．1712，两竹蛏类与小刀蛏的遗传距离分别为0．3054，0．2798和0．2662，0．2933。作者认为小刀蛏与竹蛏之间的遗传距离已达到科之间的水平，结果支持将其提升为刀蛏科的分类观点。3种蛏类线粒体16SrRNA和COI基因在种间明显的多态性，证实了16SrRNA和COI基因序列均普遍适用于蛏类种及以上阶元的系统学分析。     

渤海湾、黄河口和长江口海域海水中颗粒氨基酸含量的分布

海水中除含有大量无机物质外，还含有种类繁多，但含量很低的有机物质，其含量约为C 0.5-2.0mg/L。海水有机物质可分为溶解有机物质(DOM)和颗粒有机物质(POM)。前者为主要组分，后者所含比例很小。在大洋中POM的主要来源有:①浮游生物，尤其是浮游植物活体、死骸及其分解碎屑;②海水中进行的DOM-POM的动力平衡产物。近岸海水还受河流流入的陆地POM和大气带入的陆源尘埃的影响。POM主要由蛋白质、碳水化合物、脂类等组成。POM是食碎屑动物的良好食物，它构成海洋食物链的一环，与水域生物生产力有直接的联系。POM中蛋白质含量以颗粒氨基酸(PAA)表示。Daumas(1976)曾报道过沿岸海水中PAA含量的季节变异，纪明侯等(1992年)于1980-1981年首次对青岛胶州湾内PAA含量在不同站位和不同季节中的变化特征进行调査研究。作者等继而于1982年7月、1983年10月和1984年5、7、8月乘“金星二号”考察船前后首次研究了渤海湾、黄河口和长江口附近水域中颗粒氨基酸的组成与含量在不同站位中的分布。所得结果如下。     

Detection of DNA damage in mussels and sea urchins exposed to crude oil using comet assay

The single-cell microgel electrophoresis assay or the comet assay was used to evaluate DNA damage of dispersed crude oil on sea urchins (Strongylocentrotus droebachiensis) and mussels (Mytilus edulis L.). Sea urchins were exposed to 0.06 and 0.25 mg/L dispersed crude oil in a continuous flow system, while the mussels were exposed to 0.015, 0.06 and 0.25 mg/L dispersed crude oil. Sea urchin coelomocytes and mussel haemocytes were sampled after 4 and 5 weeks exposure, respectively. In the sea urchin coelomocytes, there was a significant concentration-related increase in the percentage of DNA in comet tail. In mussel haemocytes, there was a significantly higher percentage of DNA in comet tail for all treatments compared to the control. The responses were concentration-related up to 0.06 mg/L oil. The two highest exposure concentrations of mussels were not significantly different from each other. These results indicate that the comet assay can be used for biomonitoring of DNA damage in marine invertebrates following oil contamination.     

十四株海洋微藻脂肪酸组成的研究

对 4个门的 14株 (红藻门 8株 ,甲藻门 1株 ,隐藻门 2株 ,绿藻门 3株 )海洋微藻进行了脂肪酸含量测定 ,微藻在确定的条件下生长 ,指数生长末期收获。结果表明 ,各门的微藻都有其独特的脂肪酸特征 :红藻中含有大量的 2 0 :4 n- 6和 2 0 :5n- 3,其中紫球藻 R2 5含量最高 ,占总脂肪酸的4 9.8% (AA占总脂肪酸的 2 0 .5% ,EPA占总脂肪酸的 2 9.3% )。隐藻的主要脂肪酸是 16 :0、18:1n- 9、18:3n- 3、18:4 n- 3、2 0 :5n- 3、2 2 :5n- 3。与其它甲藻有别的虫黄藻 ,18:4 n- 3含量很少并且不含EPA,其主要合成的是 16 :0、18:1n- 9和 2 2 :6 n- 3。 C16和 C18的不饱和脂肪酸是本实验研究的 3株绿藻的主要脂肪酸     

Molecular identification of ascaridoid nematodes from the deep-sea onion-eye grenadier (Macrourus berglax) from the East Greenland Sea

Macrourus berglax from the East Greenland Sea was studied for the presence of ascaridoid nematodes in 2001, 2002 and 2003. The fishes were collected between 278 and 413 m water depth using a benthopelagic net. Based on the amplification of the internal transcribed spacer ITS-1, 5.8S, ITS-2 and flanking sequences (=ITS+), three ascaridoid nematode species were identified. The prevalence of infestation during the 3 years ranged from 42.9% to 62.9% and 22.9% to 40.0% for the anisakids Anisakis simplex (s.s.) and Pseudoterranova decipiens (s.s.), respectively, and from 28.6% to 60.0% for the raphidascarid Hysterothylacium aduncum. A total of 18 specimens, two of each species and examination year, revealed no sibling species, suggesting a limited distribution of other ascaridoid siblings into the deep sea. The ITS-1, 5.8S and ITS-2 sequences of A. simplex (s.s.) from the East Greenland Sea did not differ from previously published sequence data (GenBank) from other regions in the Atlantic and Pacific oceans. The sequences of P. decipiens (s.s.) corresponded most closely to those of specimens from Richardson Bay, western Pacific, and differed in four positions (0.5%). They corresponded least to those of specimens from Japan (1.5%). The sequence data for H. aduncum differed in two positions in the ITS-1 (0.2%) and three positions in the ITS-2 (0.3%) from sequences from Japan. A high genetic similarity between the regions can be explained by (a) extensive final host migration in the case of A. simplex (s.s.), (b) an overlapping distribution of final host populations along the continental shelves for P. decipiens (s.s.) and (c) a low host specificity and large population size in the intermediate and final hosts for H. aduncum. The occurrence of the identified species in the macrourid fish underlines the potential of cosmopolitan ascaridoid nematodes to distribute not only horizontally but also vertically in the deep sea.     

氮浓度对四株海洋绿藻总脂含量和脂肪酸组成的影响

本文用NaNO3作为氮源,分别作了氮浓度的五个水平对2属(小球藻属、裂丝藻属)的四株绿藻的生长率、总脂含量及主要脂肪酸组成的影响。C19、C97和C102的脂肪含量随N浓度的改变而有较大变化,其中C102在1.6m mol/L时脂肪含量达到最大值(24.8%)。C95的脂肪含量随氮浓度变化不大。同时,由氮浓度引起的平均生长率μ与总脂含量之间无明显相关关系。四株绿藻的EPA(20∶5n-3)和PUFAs(polyunsaturated fatty acids)含量随培养基中氮浓度的改变有较大变化但因种而异。C95和C97均在中等氮浓度时EPA含量达到最大值,分别为23.8%和27.4%。C19和C102在高氮浓度(40mmol/L)获得EPA的最大值,分别为25.7%和26.6%。