A Linked Physical and Biological Framework to Assess Biogeochemical Dynamics in a Shallow Estuarine Ecosystem

The littoral zone of Chesapeake Bay contains a mosaic of shallow vegetated and nonvegetated habitats with biotic components that are sensitive to changes in biological and physical driving factors. Static and dynamic modelling frameworks provide an integrative way to study complex hydrodynamic and biogeochemical processes in linked estuarine habitats. In this study we describe a spatial simulation model developed and calibrated relative to a specific littoral zone, estuarine ecosystem. The model consisted of four distinct habitats that contained phytoplankton, sediment microalgae, Zostera marina (eelgrass), and Spartina alterniflora. There was tidal exchange of phytoplankton, particulate and dissolved organic carbon and dissolved inorganic nitrogen between the littoral zone ecosystem and the offshore channel. Physical exchange and biogeochemical transformations within the habitats determined water column concentrations in each habitat. Predicted subtidal water column concentrations and Z. marina and S. alterniflora biomass were within the variability of validation data and the predicted annual rates of net primary production were similar to measured rates. Phytoplankton accounted for 17%, sediment microalgae 46%, the Z. marina community 24% and S. alterniflora 13% of the annual littoral zone primary production. The linked habitat model provided insights into producer, habitat and ecosystem carbon and nitrogen properties that might not have been evident with stand-alone models. Although it was an intra-ecosystem sink for particulate carbon, the seagrass habitat was a DOC source and responsible for over 30% of the littoral zone carbon and nitrogen primary production. The model predicted that the Goodwin Islands littoral zone was a sink of channel derived POC, but a source of DOC to the surrounding estuary. The framework created in this study of estuarine ecosystem dynamics is applicable to many different aquatic systems over a range of spatial and temporal scales.     

A review of factors influencing the availability of dissolved oxygen to incubating salmonid embryos

Previous investigations into factors influencing incubation success of salmonid progeny have largely been limited to the development of empirical relationships between characteristics of the incubation environment and survival to emergence. It is suggested that adopting a process‐based approach to assessing incubation success aids identification of the precise causes of embryonic mortalities, and provides a robust framework for developing and implementing managerial responses. Identifying oxygen availability within the incubation environment as a limiting factor, a comprehensive review of trends in embryonic respiration, and processes influencing the flux of oxygenated water through gravel riverbeds is provided. The availability of oxygen to incubating salmonid embryos is dependent on the exchange of oxygenated water with the riverbed, and the ability of the riverbed gravel medium to transport this water at a rate and concentration appropriate to support embryonic respiratory requirements. Embryonic respiratory trends indicate that oxygen consumption varies with stage of development, ambient water temperature and oxygen availability. The flux of oxygenated water through the incubation environment is controlled by a complex interaction of intragravel and extragravel processes and factors. The processes driving the exchange of channel water with gravel riverbeds include bed topography, bed permeability, and surface roughness effects. The flux of oxygenated water through riverbed gravels is controlled by gravel permeability, coupling of surface–subsurface flow and oxygen demands imposed by materials infiltrating riverbed gravels. Temporally and spatially variable inputs of groundwater can also influence the oxygen concentration of interstitial water. Copyright © 2006 John Wiley & Sons, Ltd.     

Mollusca from a recent coral community in Palliser bay,cook strait

From a trawling at 448–512 m in Palliser Bay, Cook Strait, New Zealand, molluscs associated with. Tertiary siltstone concretions and with a large colony of Goniocorella dumosa (Alcock) are listed. A juvenile Acesta, extremely tall and extremely broad forms of Emarginula striatula Quoy & Gaimard, and the animals of Stilifer neozelanica Dell and of Waipaoa marwicki Dell are described. Sculptifer, a new genus provisionally included in the Fossaridae, is proposed for Stilifer neozelanica. New species of Danilia and Pholadidea are described and their relationships discussed. Emarginula lophelia Beu, 1967 is synonymized with E. striatula Quoy & Gaimard, 1834, and the recent New Zealand forms of Emarginula are reviewed.     

Habitat selection and quality for multiple cohorts of young-of-the-year bluefish (Pomatomus saltatrix): Comparisons between estuarine and ocean beaches in southern New Jersey

In this study, seasonal and annual variability in the use of estuarine and ocean beaches by young-of-the-year bluefish, Pomatomus saltatrix, was evaluated by indices of abundance in coastal areas of southern New Jersey (1998–2000). Biological and physical factors measured at specific sites were correlated with bluefish abundance to determine the mechanisms underlying habitat selection. In addition, integrative and discrete indicators of bluefish growth were used to examine spatio-temporal dynamics in habitat quality and its effect on habitat selection by multiple cohorts of bluefish. Intra-annual recruitment to coastal areas of southern New Jersey was episodic, and resulted from the ingress of spring-spawned bluefish (hatch-date April) to estuarine beaches in late May to early June, followed by the recruitment of summer-spawned fish (hatch-date early July) to ocean beaches from July to October. Bluefish utilized estuarine and ocean beaches in a facultative manner that was responsive to dynamics in prey composition and temperature conditions. The recruitment and residency of bluefish in the estuary (1998–1999) and ocean beaches (1998), for example, was coincidental with the presence of the Atlantic silverside Menidia menidia and bay anchovy Anchoa mitchilli, the principal prey species for bluefish occupying these respective habitat-types. Bluefish abundance in the estuary (2000) and ocean beaches (1999–2000) was also correlated with water temperature, with the greatest catches of juveniles coinciding with their optimal growth temperature (24 °C). Bluefish growth, estimated as the slope of age–length relationships and daily specific growth rates, equaled 1.27–2.63 mm fork length (FL) d⁻¹ and 3.8–8.7% body length increase d⁻¹, respectively. The growth of sagittal otoliths was also used as a proxy for changes in bluefish size during and shortly before their time of capture. Accordingly, otolith growth rates of summer-spawned bluefish were greater at ocean beaches relative to the estuary and were explained by the more suitable temperature conditions found at ocean beaches during the mid- to late summer. Notwithstanding the fast growth of oceanic summer-spawned bluefish, individuals spawned in the spring were still larger in absolute body size at the end of the summer growing season (240 and 50–200 mm FL for spring- and summer-spawned bluefish, respectively). The size discrepancy between spring- and summer-spawned bluefish at the onset of autumn migrations and during overwintering periods may account for the differential recruitment success of the respective cohorts.     

Species-specific patterns of aggregation of wild fish around fish farms

Fish-farming structures are widespread in coastal waters and are highly attractive to wild fish. Several studies have estimated that tons to tens of tons of wild fish aggregate around fish farms. These estimates assumed that the majority of wild fish are concentrated immediately beneath farms, although this assumption has never been explicitly tested. We tested the hypothesis that abundances of wild fish would be greatest immediately beneath farms and progressively diminish with distance at 4 full-scale coastal salmon (Salmo salar) farms in Norway. At each farm, fish were counted with a video-camera system at 5 different distances from the cages (farm = 0 m, 25, 50, 100 and 200 m) throughout the water column on three separate days. Combined across all locations and times, the total abundance of wild fish was 20 times greater at the farm than at the 200 m sampling distance. Saithe (Pollachius virens) dominated assemblages at all 4 farms and were consistently significantly more abundant at the farm than at the 25–200 m distances. This ‘tight aggregation’ around farms corresponds to the reliance of saithe on waste feed when they school near farms. In contrast, patterns of distribution of both cod (Gadus morhua) and poor cod (Trisopterus minutus) varied among farms, with either highest abundances at the farm or a more even distribution of abundance across all 5 distances sampled. No specific pattern of aggregation was evident for the bottom-dwelling haddock (Melanogrammus aeglefinus). Our results suggest that the present 100 m no-fishing zone around salmon farms protects the greatest proportion of farm-aggregated saithe and cod from fishing during the daytime. However, whether this reduces their overall susceptibility to fishing requires further research regarding nighttime distribution and movements.     

Lobster trap impact on coral reefs: Effects of wind‐driven trap movement

Commercial fishers report finding their lobster traps often great distances from their original location following major hurricanes. But traps also move during lesser wind events, such as during winter cold fronts. To assess trap impact on coral communities following winter storms, lobster traps were placed in hardbottom and reef habitats commonly used by commercial fishers in the Florida Keys, United States. Trap movement, percentage benthic faunal cover, and benthic faunal damage were assessed after 26 wind events occuring over three winters. Traps moved when storms with sustained winds greater than 15 knots (27.8 km/h) persisted for more than 2 days. Winter storms above this threshold moved buoyed traps a mean (±SE) distance of 3.63 ± 0.62 m, 3.21 ± 0.36 m, and 0.73 ± 0.15 m per trap and affected a mean area of 4.66 ± 0.76 m², 2.88 ± 0.29 m², and 1.06 ± 0.17 m², per trap at 4‐m, 8‐m, and 12‐m depths, respectively. Unbuoyed traps, simulating derelict traps, moved a mean distance of 0.43 ± 0.08 m and 0.44 ± 0.02 m, and affected a mean area of 0.77 ± 0.06 m² and 0.90 ± 0.08 m² per trap at 4‐m and 8‐m depths, respectively. Injuries caused by trap movement included scraped, fragmented, and dislodged sessile fauna, resulting in significant damage to stony coral, octocoral, and sponges. Overall, sessile fauna cover along the trap movement path was reduced from 45% to 31%, 51% to 41%, and 41% to 35% at the 4‐m, 8‐m, and 12‐m sites, respectively. Because of the large numbers of traps deployed and reported lost each season, damage to sessile fauna and loss of benthic faunal cover caused by traps needs to be considered to effectively protect coral reefs and manage essential fishery habitat in the future.     

Conservation of wetlands especially as waterfowl habitat in northeast China

Wetland is a special ecological system in the earth, which can provide a good habitat for many wild animals. It is a reproduction and overwintering area for many rare waterfowls, too. The northeast region, including Heilongjiang, Jilin, Liaoning provinces, and the east of Inner Mongolia, is a district with the maximum areas and types of wetlands in China. It is the center of the waterfowls reproduction in Northeast Asia and the necessary region moving to the south. The conservation of wetland and waterfowls habitats in northeast China plays an important role in international waterfowls habitats conservation. The northeast weterfowls’ types, number and distribution specific features are studied in three aspects in the paper, so do the rare waterfowls. Existing problems and the administration polices on waterfowls and their habitats conservation in the northeast are also discussed. It shows that the conservation of wetland waterfowls habitats in northeast China is important.     

Spatial patterns and environmental risks of ringnet fishing along the Kenyan coast

Ringnet fishing began in the early 20th century and is practised worldwide, mainly to target nearshore pelagic species. The method was introduced to Kenya’s coastal waters by migrant fishers from Tanzania. However, the impacts of this fishing gear remain poorly assessed. We assessed the spatial distribution of ringnet fishing effort and its possible effects on ecosystem components, such as coral reefs, marine megafauna and marine protected areas, on the south coast of Kenya. We tracked 89 ringnet fishing trips made from December 2015 to January 2016 and used spatial multicriteria analysis to determine hotspots of possible environmental risks. The results showed that habitat type and bathymetric profile influenced the spatial distribution of ringnet fishing effort. Mixed seagrass and coral habitats had the highest concentration of the effort. Most of the habitats in the study area were moderately exposed to the impacts of the ringnet fishery. The study identifies high-risk areas that require spatial measures to minimise possible environmental risks of the gear both to habitats and to endangered sea turtles.