浙南近海虾类群落结构及其多样性分析

作者根据2015年11月(秋季)、2016年2月(冬季)、2016年5月(春季)和2016年8月(夏季)对浙南近海进行的渔业资源调查数据,用生物量作为虾类资源分布的数量指标,对该海域虾类的组成、数量分布以及季节变化进行分析。结果显示:该区域共鉴定出虾类30种,隶属于10科21属,以对虾科(Penaeidae)虾类最多,其次为管鞭虾科(Solenoceridae),长臂虾科(Palaemonida)位居第3位。按季节来看,秋季共鉴定虾类27种,各站位平均生物量为6.97 kg/km2,优势种为凹陷管鞭虾(Solenocera koelbeli)、中国毛虾(Acetes chinensis)和中华管鞭虾(Solenocera crassicornis)等3种;冬季鉴定出虾类25种,平均生物量为1.65 kg/km2,优势种为凹陷管鞭虾、扁足异对虾(Atypopenaeus stenodactylus)、日本鼓虾(Alpheus japonicus)、鲜明鼓虾(Alpheus digitalis)、中国毛虾、中华管鞭虾和周氏新对虾(Metapenaeus joyneri)等7种;春季20种,平均生物量为2.22 kg/km2,优势种为戴氏赤虾(Metapenaeopsis dalei)、东海红虾(Metapenaeopsis dalei)和中华管鞭虾等3种;夏季16种,平均生物量为10.36 kg/km2,优势种有鹰爪虾(Trachysalambria curvirostris)和中华管鞭虾等2种。Margalef丰富度指数(D)、Shannon-Wiener多样性指数(H′)和Pielou均匀度指数(J′)秋季均低于冬季。秋冬季受到浙闽沿岸流影响,温度、盐度相对较低,夏季受到台湾暖流外侧影响,温度、盐度相对较高,且各季节间由于瓯江、椒江、飞云江、鳌江等陆源性冲淡水的影响,盐度、温度变化相对较大,使得该区域的物种不得不适应一个跨度较大的温盐范围,广温广盐性种类为主。     

基于Cyt b基因序列的南海北部蓝圆鲹群体遗传多样性研究

为了解南海北部蓝圆鲹(Decapterus maruadsi)的群体遗传变异特征,本研究利用线粒体DNA Cyt b基因部分序列对9个群体共203个个体进行群体遗传多样性和遗传结构分析.结果显示:在722 bp长的Cyt b部分序列中,共检测出52个多态位点,定义25个单倍型;群体的单倍型多样性(h)为0.577±0.036,核苷酸多样性(π)为0.001 55±0.001 12,整体遗传多样性呈中等偏低水平,其中雷州半岛和海南岛以东5个群体的遗传多样性水平明显高于以西的4个北部湾群体.单倍型系统发育树和网络图均未表现出与地理位置相对应的谱系结构,单倍型网络图呈以主体单倍型为中心的星状结构.群体间的Fst值为-0.077~0.018,且统计检验均不显著(p0.05).分子方差分析(AMOVA)表明,遗传变异全部来源于群体内个体间.Tajima's D值和Fu's Fs值均为显著负值,核苷酸不配对分布呈明显的单峰分布.南海北部蓝圆鲹群体约在29 000a前可能发生过扩张事件,导致遗传多样性呈现高h、低π模式;9个群体间的遗传分化并不显著,符合是一个随机交配种群的假设,但9个群体的遗传多样性水平却表现出明显的地理趋势,提示将南海北部蓝圆鲹作为单一种群进行渔业管理需持谨慎态度.     

厚壳贻贝(Mytilus coruscus)足丝蛋白mcofp3和mcofp6的cDNA克隆及序列分析

通过设计特异性引物,采用PCR扩增的方法对厚壳贻贝足腺细胞cDNA文库进行筛选,共克隆得到14条厚壳贻贝mcofp3的cDNA序列和8条mcofp6的cDNA序列,并对其基因序列及推导的氨基酸序列进行了序列比对和变异位点初步分析。结果表明,14条mcofp3cDNA序列分属于厚壳贻贝mcofp3家族的两个亚家族,其成熟肽序列变异相对活跃;而8条mcofp6 cDNA序列并无明显的亚家族划分,序列相对保守。本次实验所获得的mcofp cDNA序列初步显示了厚壳贻贝足丝蛋白家族基因的分子多样性,为将来深入了解厚壳贻贝足丝蛋白的分子多样性机制以及在此基础上开发相关的新型生物黏附剂奠定了基础。     

同种罗非鱼(Tilapia)不同地区选育群体的遗传多样性分析

采用微卫星标记分析技术,选用36对微卫星引物对罗非鱼原始群体和引种群体进行遗传多样性分析,原始群体为中国水产科学研究院淡水渔业研究中心保种的奥利亚罗非鱼("夏奥1号",ZA)、埃及尼罗罗非鱼("99品系",ZN),引种群体为广西水产研究所从淡水渔业研究中心引进培育的奥利亚罗非鱼群体(GA)和埃及尼罗罗非鱼群体(GN)。结果显示19对引物具备多态性,比率为52.8%,ZA与GA两个群体的平均观测杂合度、平均期望杂合度、平均多态信息含量分别为0.10、0.15、0.12,遗传相似性系数为0.9867,平均近交系数(FST)与基因流(Nm)分别为0.0379、6.3408;而ZN与GN两个群体平均观测杂合度、平均期望杂合度、平均多态信息含量分别为0.37、0.49、0.43,遗传相似性系数为0.7696,平均近交系数(FST)与基因流(Nm)分别为0.1146、1.9309。分析结果表明:(1)两个奥利亚群体中ZA与GA遗传多样性小,群体间遗传距离小,相似度较高,选育出的奥利亚群体遗传结构相对稳定;(2)两个尼罗群体中ZN与GN遗传多样性适中,群体间存在一定的遗传距离,相似度低,ZN与GN两个埃及尼罗群体具备进一步选育出新品系的潜力;(3)基因座UNH896、UNH995、UNH999可应用为鉴别奥利亚群体与埃及尼罗群体的特异性标记。     

深圳海域弧菌种类组成、数量分布及其与环境因子的关系研究

研究了深圳海域2008年4月、9月的水体弧菌数量、种类组成及其分布,探讨了弧菌总数及各优势类群的数量分布与环境因子间的相关关系。结果表明:弧菌总数分布具有季节性,东部海域春季(4月)的弧菌数量高于秋季(9月)的,其均值分别为1.50×104,8.89×102CFU/cm3;在西部海域秋季的略高于春季的,其均值分别为5.09×102,2.66×102CFU/cm3;弧菌数量最高值出现在大亚湾(4.40×104CFU/cm3)。弧菌的优势类群具有季节性分布特征:春季特有的优势类群有Vibrio gigantis类似种和V.splendidus类似种,秋季特有的优势类群有V.natriegens类似种;V.alginolyticus类似种是两个季节共有的优势类群,其数量春季高于秋季的。弧菌种类、数量与海水温度、盐度及细菌总数、Chl-a等环境因子有一定的相关性,其中盐度为弧菌种类及数量分布的主要影响因子。     

Seasonal variations of phytoplankton diversity in the Coleroon coastal waters, southeast coast of India

The results of an investigation carried out during June 2005 to May 2007 on physico-chemical parameters,species composition and community structure of phytoplankton including Chlorophyll a(Chl-a) at the Coleroon coastal waters(Southeast coast of India) are reported.Air and surface water temperatures(°C) varied from 25.1 to 30.1 and from 24.5 to 28.5 respectively.Salinity values varied from 6 to 28.5 and the pH ranged between 7.0 and 8.3.Variation in dissolved oxygen content was from 3.1 to 7.5 mg/dm-3 while the light extinction coefficient values(LEC) ranged between 3.1 and 10.1 cm.The ranges of inorganic nutrients(μmol/dm-3) viz.,nitrate,nitrite,phosphate and silicate were 10.1-23.4,1.2-8.9,0.2-3.1 and 55-125,respectively.The ranges of Chlorophyll a(μg/dm-3) values was 2.0-7.5.Presently,124 phytoplankton species representing different classes viz:Bacillariophyceae(77),Dinophyceae(19),Cyanophyceae(15),Chlorophyceae(10) and Chrysophyceae(3) were recorded.The phytoplankton cell abundance varied from 0.290 to 111.662 cells/cm-3,with peak diversity(3.38 bits/ind.) during summer season.The maximum abundance was found during summer season coinciding with the stable hydrographical conditions.The seasonal distribution and abundance of phytoplankton are discussed in relation to hydrographical parameters.Canonical Correspondence Analysis(CCA) was applied in this paper for discriminating environmental factors having effect on phytoplankton community at species level.Coleroon coastal water is subjected to long term fluctuations in physico-chemical parameters depending upon the seasonal tidal amplitude and freshwater influx resulting in a continuous exchange of organic,inorganic,plant and animal matters.     

The concept of ecological succession applied to phytoplankton over four consecutive years in five ponds featuring a salinity gradient

The distribution of phytoplankton abundance, biomass and species composition coupled with environmental factors and metazooplankton was studied relatively intensively and over a period of four consecutive years in five ponds featuring a gradient of increasing salinity from near to that of sea water to a nine-fold concentration from 2000 to 2003. The results indicate that the physical characteristics of the water (temperature and salinity) were quite similar over the years. Nutrients, which were concentrated in pond A1, decreased with increases in salt concentration. The composition of the phytoplankton community showed strong seasonality. Diatoms dominated in the first ponds A1, A16 and C2-1, followed by dinoflagellates. Chlorophyceae dominated the phytoplankton community in the hypersaline ponds M2 and TS. Cyanobacteriae were relatively abundant in ponds M2 and TS. The highest phytoplankton density and biomass were found in the ponds with the highest salinity due to the proliferation of Dunaliella salina (Chlorophyta: Volvocales). The inter-annual study of phytoplankton succession in the Sfax solar salterns showed slight differences among the years of study due to the stability of the environmental conditions. Phytoplankton communities were permanently primitive, stage 1 – structured as they failed to build complexity because of salt stress which operates for longer and above any other variables. This reduced frequency of disturbance to the existing course of regulation, allowed the community to “mature” from its “primitive” state, rather than experience frequent structural setbacks.     

胶州湾中部海域秋、冬季大型无脊椎动物群落结构及多样性研究

根据2008年9月~2009年2月在胶州湾中部海域进行的逐月定点底拖网调查,对该海域秋、冬季大型无脊椎动物群落结构及多样性变化进行了初步研究.结果表明,胶州湾秋、冬季共捕获大型无脊椎动物60种,其中甲壳动物和软体动物是主要的无脊椎动物类群;优势种组成具有较明显的月间变化,主要为口虾蛄Oratosquilla oratoria、短蛸Octopus ocellatus、脊腹褐虾Crangon affinis等湾内定居性种类及洄游性较小的种类.Margalef种类丰富度指数范围为1.998~4.669,自9月起逐月递减,11月达到最低值,随后又逐月升高,2月达到最高值;Shannon-Wiener多样性指数和Pielou均匀度指数范围分别为1.325~2.500和0.422~0.693,逐月变化趋势与物种丰富度指数基本一致.多样性指数与海域温度、盐度和深度等环境因子均无显著性相关.多元统计分析表明,胶州湾中部海域秋、冬季大型无脊椎动物群落可划分为2个时间组群;组群间群落种类组成结构差异不显著.     

人工育珠对三角帆蚌(Hyriopsis cumingii)遗传基因影响的初步研究

采用酚-氯仿和试剂盒两种提取法对三角帆蚌怀珠群与非怀珠群各6个个体进行基因组DNA的提取,然后在优化RAPD(随机扩增多态性DNA)检测条件基础上,从80个随机引物中筛选出12个扩增较好且多态性强的引物进行RAPD扩增,产物通过水平板琼脂糖凝胶电泳和垂直板聚丙烯酰胺凝胶电泳两种方法进行检验并对DNA的多态性进行分析。结果显示在怀珠群和非怀珠群检测到的位点数、多态位点比例、平均Shannon多态性信息指数、平均Nei's基因多样性指数、群体内个体间平均遗传相似率和平均遗传距离分别为100、33%、0.1927、0.1324、0.904、0.096,95、47.37%、0.2711、0.1879、0.861、0.139,群体间的平均遗传距离为0.821,非怀珠群的变异性大于怀珠群;本研究还获得了两群体各自的特异扩增谱带及两群体间表达差异较大谱带,这些位点很可能是由人工育珠所引起。根据MEGA4.0软件的UPGMA和NJ程序构建的分子系统树可直观地将两群体分开。     

Distribution patterns of interstitial polychaetes in sandy beaches of southern Brazil

This study describes the distribution patterns of interstitial polychaetes along morphodynamic gradients on six exposed sandy beaches in Santa Catarina and Paraná (South Brazil). Three random transects were sampled at two points on each beach, one at the swash and another at the surf zone, in winter and summer conditions. Six sediment replicates were collected at each sampling point using a corer of 4.6 cm internal diameter that removed 10 cm into the sediment. Abundance and composition of interstitial polychaete were correlated to wave height, slope, grain size, CaCO₃, chlorophyll a , omega indexes, temperature and relative tide range using a canonical correspondence analysis (CCA). A factorial ANOVA showed that taxa richness, mean density and Shannon's diversity were significantly higher at the reflective beaches, but average values differ significantly between transects and these differences change according to the beach zones on both sampling dates. PERMANOVA showed that polychaete associations differ among transects according to the beach zones. The composition of interstitial polychaete associations was significantly correlated to beach morphodynamics and features (P < 0.01). Polychaete associations of reflective beaches were more diverse than in other morphodynamic states. Intermediate beaches may also sustain diverse associations due to temporal variability of the morphodynamic patterns. Beaches presenting extreme dissipative morphodynamics and compacted sediments appear to be unfavourable for the occurrence of interstitial polychaetes.