三角褐指藻及其藻际细菌对不同无机氮源的响应

海洋生态系统中,浮游植物和细菌之间的相互作用是影响营养盐供应和再生、海洋初级生产力和生物地球化学循环的基本生态关系.为研究营养盐、浮游植物和细菌之间的关系,在实验室内培养条件下,通过改变氮源的形态(硝态氮和铵态氮)和浓度,研究海洋浮游植物三角褐指藻(Phaeodactylum tricornutum)的藻际细菌在不同营...     

Phylogenetic diversity of planktonic bacteria in the Chukchi Borderland region in summer

Planktonic bacteria are abundant in the Chukchi Borderland region. However, little is known about their diversity and the roles of various bacteria in the ocean. Seawater samples were collected from two stations K2S and K4S where sea ice was melting obviously. The analysis of water samples with fluorescence in situ hybridization (FISH) showed that DMSP-degrading bacteria accounted for 13% of the total bacteria at the station K2S. No aerobic anoxygenic phototrophic (AAP) bacteria were detected in both samples. The bacterial communities were characterized by two 16S rRNA gene clone libraries. Sequences fell into four major lineages of the domain Bacteria, including Proteobacteria (Alpha, Beta and Gamma subclasses), Bacteroidetes, Actinobacteria and Firmicutes. No significant difference was found between the two clone libraries. SAR11 and Rhodobacteraceae clades of Alphaproteobacteria and Pseudoalteromonas of Gammapro-teobacteria constituted three dominant fractions in the clone libraries. A total of 191 heterotrophic bacterial strains were isolated and 76% showed extracellular proteolytic activity. Phylogenetic analysis reveals that the isolates fell into Gammaproteobacteria, Bacteroidetes, Actinobacteria and Firmicutes. The most common genus in both the bacterial isolates and protease-producing bacteria was Pseudoalteromonas. UniFrac data showed suggestive differences in bacterial communities between the Chukchi Borderland and the northern Bering Sea.     

脱壳病和吻肿病东风螺体内致病菌及条件致病菌菌相研究

为探讨东风螺脱壳病和吻肿病与体内外致病菌及条件致病菌的相关性,测定了东风螺养殖水体环境中异养菌菌落总数,并对病螺及健康螺体内致病菌及条件致病菌进行了分离鉴定.经兔血培养基、TCBS培养基和弧菌显色培养基分离培养,用生化试验和细菌16S rDNA序列分析鉴定,结果显示:发生脱壳病的方斑东风螺螺池水体中的异养菌菌落总数为1.34×106 cfu/mL,病螺体内分离的致病菌及条件致病菌有副溶血弧菌、哈氏弧菌、河流弧菌、Vibrio hepatarius、腐败希瓦氏菌、海藻希瓦氏菌和芽孢杆菌,其中优势菌株为副溶血性弧菌溶血菌株和哈氏弧菌;脱壳病与吻肿病共患的泥螺螺池水体中异养菌的菌落总数为1.46×107 cfu/mL,病螺体内分离的致病菌及条件致病菌有副溶血弧菌、哈氏弧菌、鲍鱼希瓦氏菌、海藻希瓦氏菌和芽胞杆菌,优势菌株为海藻希瓦氏菌、鲍鱼希瓦氏菌和哈氏弧菌;健康东风螺螺池水体异养菌菌落总数为7.6×104 cfu/mL,健康东风螺螺体内的优势菌株为副溶血性弧菌非溶血菌株和Vibrio hepatarius.试验结果表明,东风螺脱壳病和吻肿病与养殖水体环境中异养菌的总数及螺体内部致病菌及条件致病菌分布具有一定相关性.     

Rise of the Dormant: Simulated Disturbance Improves Culturable Abundance,Diversity, and Functions of Deep-Sea Bacteria of Central Indian Ocean Basin

The abundance of baroduric bacteria from nine sediment cores (0–10 cm below sea floor) was examined for their response to simulated benthic disturbance in the Central Indian basin (CIB). While the total counts of bacteria decreased from 10⁹ to 10⁶ g^?1 dry wt sediment, the average retrievable counts (CFU-colony forming units) improved by two orders of magnitude, i.e., from 10² 10⁴ g^?1 dry wt sediment. The baroduric retrievable forms were dominated by Acinetobacter and Moraxella sp before the disturbance. After the disturbance the generic diversity was represented by Staphylococcus sp, Enterobacter sp, Micrococcus sp, Coryneforms sp, and Pseudomonas sp in addition to Acinetobacter. These observations were corroborated by changes in enzymatic activities of the retrievable bacteria, which could lead to changes in the biochemical characteristics of the sediment. Thus the simulated disturbance brought about an increase in culturable abundance, taxonomic and functional diversity of deep-sea sediment of the CIB.     

对虾高位池精养和生态养殖模式下沉积物中碳、氮元素变化及对底栖细菌的影响

本文采用原位生态学研究方法分析两种较为典型的对虾养殖模式—高位池精养模式和生态养殖模式沉积物中碳、氮元素的变化和其对底栖细菌的影响.结果表明:(1)在两种养殖模式下沉积物中碳元素含量都是呈上升趋势,高位池精养模式中C∶N值呈下降趋势,而生态养殖模式中C∶N值则呈上升趋势.(2)底栖细菌的呼吸量及其生物量变化呈显著正相关.单位生物量的底栖细菌代谢力变化和沉积物中C∶N值有关.在高位池精养模式中,沉积物C∶N值较高(＞16.59),单位生物量底栖细菌代谢力保持恒定;在生态养殖模式中,沉积物C∶N值较低(＜15.58),单位生物量底栖细菌代谢力随C∶N值的上升而增加.     

柄海鞘共附生细菌的分离培养与系统发育多样性研究

通过纯培养和16SrRNA基因序列的相似性比对,并构建系统发育树对威海海域柄海鞘共附生细菌的多样性进行了研究。用2216E培养基从柄海鞘样品中分离到78株细菌,通过形态学特征和TCBS培养基选择性筛选后,选取30株具有代表性的菌株进行了16SrRNA基因测序和基于16SrRNA基因序列的系统发育多样性分析。结果表明,30株菌株分别属于细菌域的4个系统发育类群(Actinobacteria,Bacteroidetes,Firmicutes,Gro-teobacteria)的11个科,11个属。根据16SrRNA基因序列,大多数菌株与其系统发育关系最密切的模式菌株之间存在一定的遗传差异(16SrRNA基因序列相似性为91.82%～98.93%)。其中菌株HQW7,HQYD1,HQWD4,HQE1和HQE2与相关模式菌株的16SrRNA基因最高相似度仅分别为91.82%,92.51%,92.99%,93.52%,93.87%,这5株菌可能代表新的分类单元。威海海域柄海鞘共附生细菌存在着较为丰富的物种多样性和系统发育多样性,并可能存在新的物种。     

吉尔吉斯斯坦伊塞克湖一处土壤样品细菌多样性

采用纯培养方法从吉尔吉斯斯坦共和国伊塞克湖一处温泉旁的土壤中分离到32株细菌,通过ARDRA 分析后得到不同的类群,从各个类群中随机选取1个代表菌株进行16S rDNA 序列测定和系统发育的分析。结果表明：分离的菌株分布在假单胞菌属（Pseudomonas）、类芽孢杆菌属（Paenibacillus）、芽孢杆菌属（Bacillus）、寡养单胞菌属（Stenotrophomonas）、Lysinibacillus、溶杆菌属（Lysobacter）、短芽孢杆菌属（Brevibacillus）、根瘤菌属（Rhizobium）、变形杆菌属（Proteus）等9个属,且部分菌株的16S rDNA序列同源性低于97%,可能是潜在的新种。结果揭示了该样点可培养细菌种群的多样性及独特性。     

一株产铁载体细菌的筛选及其与云母的相互作用

        产铁载体细菌与云母类矿物相互作用的研究有助于了解矿物生物风化和土壤形成的演化规律和机理。采用纯培养法 自南京龙山废钾矿区酸模根际土壤分离筛选到一株高产荧光铁载体的细菌Z6,通过16S rDNA 序列分析和生理生化反应将其 鉴定为假单胞菌属（Pseudomonas sp.）;通过室温静置培养试验研究Z6 菌株与云母的相互作用结果表明,细菌生长代谢前期 （8~15 d）快速产生大量铁载体,菌株与矿物共培养75 d 后,产铁载体细菌对云母类矿物确实产生了风化作用,黑云母组发 酵液中Fe 含量增加了211 倍,Si 含量增加了约27.8 倍,SEM 显示云母表面出现溶蚀坑,细菌可以在矿物表面形成生物膜或 矿物- 细菌复合物。不同矿物对共培养体系中细菌数量、荧光铁载体含量、溶液pH 的影响不同。     

青藏高原土壤中一株低温原油降解菌的分离鉴定及其原油降解特性

从青藏高原班戈桥地区土壤中分离到一株能利用原油为碳源生长的细菌(BGQ-6). 通过16S rRNA基因序列比对及Biolog GEN Ⅲ鉴定板确定该菌株为Rhodococcus qingshengii. 将生长至对数期的菌株接入MM培养基, 10 ℃、150 rpm条件下培养15 d后, 通过GC法检测到该菌对原油的总降解率为74.14%, 且对直链烷烃、支链烷烃、环烷烃和芳香烃等60种烃类有较高的降解率. 通过特异性基因扩增检测到该菌株基因组中具有4个alkB和1个almA两种烷烃羟化酶基因.     

Detection of antibiotic resistant bacteria inhabiting the sand of non-recreational marine beach

The present study examined the antibiotic resistance of heterotrophic bacteria, which were isolated from the sand of the beach located in the National Park of the southern Baltic Sea coast. The bacteria demonstrated low levels of antibiotic resistance. These microorganisms were the most resistant to cefaclor and clindamycin and the most sensitive to clarithromycin, doxycycline, gentamycin and oxytetracycline. The majority of bacteria inhabiting the sand of the studied beach were resistant to only one antibiotic out of 18 tested antibiotics in this study. The bacteria inhabiting the middle part of the beach and the dune were more antibiotic resistant than bacteria isolated from the seawater and the shoreline-seawater contact zone. Generally, there was no significant difference in antibiotic resistance between bacteria isolated from the surface and the subsurface sand layers. The bacterial antibiotic resistance level depends on the chemical structure of antibiotics.