The influence of boulder shape on the spatial distribution of crustose coralline algae (Corallinales,Rhodophyta)

Studies investigating the many ecologically and economically important species in benthic boulder habitats often use artificial boulders for determining species colonization. In some cases square‐edged blocks are used that are shaped much differently than the ovoid or ‘round’ boulders often occurring naturally. Here it was tested if the shape of boulders affects the distribution across the boulder surface of crustose coralline algae (CCA), a taxon that strongly influences ecological dynamics in this habitat. The distance that CCA extends from the edge of boulders toward the centre of the underside was measured, and it was found that CCA extended further underneath boulders that were round‐shaped compared with those that were block‐shaped, probably because of light reaching further underneath round boulders. This result shows how at least one important taxon can be affected by variation in the shape of these boulders. Hypotheses being tested that use artificial substrata to model naturally occurring boulders should be carried out only in places where the artificial and naturally occurring boulders match physically.     

RNA:DNA ratios of Baltic Sea herring larvae and copepods in embayment and open sea habitats

Elucidation of important nursery habitats for young fish can aid in the management and assessment of fish stocks. Herring (Clupea harengus) in the Baltic Sea primarily spawn in coastal areas, but larvae are also present in off-shore, open sea areas. To investigate if sheltered coastal habitats provide a better growth environment for larval herring, we compared short-term growth (as indexed by whole body RNA:DNA ratios) of larval herring from three habitat types of the northwest Baltic proper (sheltered inner bay, exposed outer bay, and open sea). In addition, we compared individual RNA content of adult female Eurytemora affinis (a common Baltic copepod) among these different habitats. High RNA levels in these copepods indicate high production of nauplii, which are important food for larval herring. Both RNA:DNA ratios of larval herring and RNA content of E. affinis were significantly greater in embayment habitats, suggesting that the sheltered coastal areas are high quality nursery habitats for young Baltic herring.     

The effect of habitat and environmental history on otolith chemistry of barramundi Lates calcarifer in estuarine populations of a regulated tropical river

We examine the microchemistry of otoliths of cohorts of a fished population of the large catadromous fish, barramundi Lates calcarifer from the estuary of a large tropical river. Barramundi from the estuary of the large, heavily regulated Fitzroy River, north-eastern Australia were analysed by making transects of ⁸⁷Sr/⁸⁶Sr isotope and trace metal/Ca ratios from the core to the outer edge. Firstly, we examined the Sr/Ca, Ba/Ca, Mg/Ca and Mn/Ca and ⁸⁷Sr/⁸⁶Sr isotope ratios in otoliths of barramundi tagged in either freshwater or estuarine habitats that were caught by the commercial fishery in the estuary. We used ⁸⁷Sr/⁸⁶Sr isotope ratios to identify periods of freshwater residency and assess whether trace metal/Ca ratios varied between habitats. Only Sr/Ca consistently varied between known periods of estuarine or freshwater residency. The relationships between trace metal/Ca and river flow, salinity, temperature were examined in fish tagged and recaptured in the estuary. We found weak and inconsistent patterns in relationships between these variables in the majority of fish. These results suggest that both individual movement history within the estuary and the scale of environmental monitoring were reducing our ability to detect any patterns. Finally, we examined fish in the estuary from two dominant age cohorts (4 and 7 year old) before and after a large flood in 2003 to ascertain if the flood had enabled fish from freshwater habitats to migrate to the estuary. There was no difference in the proportion of fish in the estuary that had accessed freshwater after the flood. Instead, we found that larger individuals with of each age cohort were more likely to have spent a period in freshwater. This highlights the need to maintain freshwater flows in rivers. About half the fish examined had accessed freshwater habitats before capture. Of these, all had spent at least their first two months in marine salinity waters before entering freshwater and some did not enter freshwater until four years of age. This contrasts with the results of several previous studies in other parts of the range that found that access to freshwater swamps by larval barramundi was important for enhanced population productivity and recruitment.     

Distinctive stable isotope ratios in important zooplankton species in relation to estuarine salinity gradients: Potential tracer of fish migration

To assess the potential of stable isotope ratios as an indicator of fish migration within estuaries, stable isotope ratios in important zooplankton species were analyzed in relation to estuarine salinity gradients. Gut contents from migratory juveniles of the euryhaline marine fish Lateolabrax japonicus were examined along the Chikugo River estuary of the Ariake Sea, which has the most developed estuarine turbidity maximum (ETM) in Japan. Early juveniles in March and April preyed primarily on two copepod species; Sinocalanus sinensis at lower salinities and Acartia omorii at higher salinities. Late juveniles (standard length > 40 mm) at lower salinities preyed exclusively on the mysid Acanthomysis longirostris until July and complementarily on the decapod Acetes japonicus in August. These prey species were collected along the estuary during the spring–summer seasons of 2003 and 2004, and their carbon and nitrogen stable isotope ratios (δ¹³C and δ¹⁵N) were evaluated. The δ¹³C values of prey species were distinct from each other and were primarily depleted within and in close proximity to the ETM (salinity < 10); S. sinensis (−26.6‰) < Acanthomysis longirostris (−23.3‰) < Acartia omorii (−21.1‰) < Acetes japonicus (−18.5‰). The overall gradient of δ¹³C with salinity occurred for all prey species and showed minor temporal fluctuations, while it was not directly influenced by the δ¹³C values in particulate organic matter along the estuary. In contrast to δ¹³C, the δ¹⁵N values of prey species did not exhibit any clear relationship with salinity. The present study demonstrated that δ¹³C has the potential for application as a tracer of fish migration into lower salinity areas including the ETM.     

The benthic macrofauna of the St. Lucia Estuary during the 2005 drought year

The St. Lucia Estuary is the largest estuarine system in Africa. The estuary is part of the Greater St. Lucia Wetland Park, which has been declared a World Heritage Site. This ecosystem has been subjected to severe drought conditions over the last four to five years, resulting in its mouth being closed off from the ocean in June 2002 for a period of over four years. The main aim of this study was to document the effects of the prevailing drought on the macrofauna of the system, since the last work on this benthic component had been undertaken over a decade ago, during a normal-to-wet phase. Macrofauna samples together with physico-chemical data were collected at representative sites in the Narrows, and the South and North lakes in February, April, August and October 2005. The drought exerted a strong influence on the system, leading to hypersaline conditions developing in its northern regions (maximum of 126 at Hell's Gate), and to the loss of aquatic habitat. Ordinations and clustering indicated that the macrofauna of the system could generally be separated into three clusters viz. (1) the Narrows and the southern portion of South Lake, (2) the northern half of South Lake, and (3) the North Lake–False Bay complex. Multivariate correlations indicated weak relationships between macrofaunal community structure and physico-chemical parameters. The distinction in macrofaunal assemblages between these clusters was probably caused by these habitats being physically separated at the peak of the drought, with no water flow between them, thereby preventing exchange of planktonic larvae and retarding colonisation of habitats. There was a northward decline in taxonomic richness and diversity of macrofauna in the system, which correlated positively with water depth and negatively with the biomass of microphytobenthos. It is evident that the drought structured macrofauna communities primarily through its effects on water depth and habitat fragmentation. The results of this investigation provide valuable information regarding the effects of droughts on estuarine–lake systems and the possible mechanisms by which they occur.     

Influence of seasonal forcing on habitat use by bottlenose dolphinsTursiops truncatus in the Northern Adriatic Sea

Bottlenose dolphins are the only cetaceans regularly observed in the northern Adriatic Sea, but they survive at low densities and are exposed to significant threats. This study investigates some of the factors that influence habitat use by the animals in a largely homogeneous environment by combining dolphin data with hydrological and physiographical variables sampled from oceanographic ships. Surveys were conducted year-round between 2003 and 2006, totalling 3,397 km of effort. Habitat modelling based on a binary stepwise logistic regression analysis predicted between 81% and 93% of the cells where animals were present. Seven environmental covariates were important predictors: oxygen saturation, water temperature, density anomaly, gradient of density anomaly, turbidity, distance from the nearest coast and bottom depth. The model selected consistent predictors in spring and summer. However, the relationship (inverse or direct) between each predictor and dolphin presence varied among seasons, and different predictors were selected in fall. This suggests that dolphin distribution changed depending on seasonal forcing. As the study area is relatively uniform in terms of bottom topography, habitat use by the animals seems to depend on complex interactions among hydrological variables, caused primarily by seasonal change and likely to determine shifts in prey distribution.     

A general solution for tide‐induced groundwater fluctuation in an estuarine‐coastal confined and unconfined aquifer system

This paper presents an analytical solution to tide‐induced head fluctuations in a two‐dimensional estuarine‐coastal aquifer system that consists of an unconfined aquifer and a heterogeneous confined aquifer extending under a tidal river with a semipermeable layer between them. This study considers the joint effects of tidal‐river leakage, inland leakage, dimensionless transmissivity between the tidal‐river and inland confined aquifer, and transmissivity anisotropic ratios. The analytical solution for this model is obtained via the separation of variables method. Three existing solutions related to head fluctuation in one‐ or two‐dimensional leaky confined aquifers are considered as special cases in the present solution. This study shows that there is a threshold of tidal‐river confined aquifer length. When the tidal‐river length is greater than the threshold length, the inland head fluctuations remain sensitive to the leakage effect but become insensitive to the tidal‐river width and dimensionless transmissivity. Considering leakage and transmissivity anisotropy, this study also demonstrates that at a location farther from the river–inland boundary, head fluctuations increase with increasing leakage and transmissivity anisotropy; the maximum head fluctuation occurs when leakage and transmissivity anisotropy are both at their maximum values. The combined action of the 3 effects of loading, tidal‐river aquifer leakage, and inland aquifer leakage differs significantly according to various aquifer parameters. The analytical solution in this paper can be applied to demonstrate the behaviours of the head fluctuations of an estuarine‐coastal aquifer system, and the head fluctuations can be clearly described when the tidal and hydrogeological parameters are derived from field measurement data or hypothetical cases.     

Mapping Seabed Geology by Ground-Truthed Textural Image/Neural Network Classification of Acoustic Backscatter Mosaics

We present a novel, automated method for seabed classification based on shallow water backscatter mosaics from Sydney Harbour. Our approach compares the results between two different methods of image feature extraction when combined with artificial neural networks. The association of image textures with seabed geology is used to train the artificial neural networks to recognise the variability of textural attributes for three seabed classes comprising mud, sand and gravel. After network training, we classify unknown portions of the backscatter mosaic with a success rate ranging from 77% to 92%. Our results suggest that the computationally fast grey-level co-occurrence iteration algorithm holds promise for benthic habitat mapping in space and time, leading to real-time data analysis at sea.     

Offshore oil platforms and fouling communities in the southern Arabian Gulf (Abu Dhabi)

This study examined the fouling organisms on the legs of offshore oil platforms at two sites in the southern Arabian Gulf (offshore Abu Dhabi, United Arab Emirates). 100% of the metal structures was colonized by encrusting organisms. Both the number of individuals and the total biomass tended to decrease with depth. The total weight of dead shells always exceeded that of living organisms. Sessile filter feeders dominated the biomass, whereas small mobile forms had the largest number of individuals. The biomass at the deeper platform (22 m) was dominated by bivalves, barnacles and bryozoans, while polychaetes and amphipods had the greatest number of individuals. Biomass values here ranged from 1 g/0.1 m2 at 20 m to 147 g/0.1 m2 at 5 m; the corresponding individual numbers were 266 (20 m) and 11,814 indiv./0.1 m2 (5 m). The results at the shallower platform (11 m) differed in several respects: barnacles clearly dominated over bivalves, and sponges exceeded byrozoans, while total individual numbers fell due to a decline in polychaete dominance. Biomass values here ranged from 84 g/0.1 m2 at 10 m to 153 g/0.1 m2 at 0 m; the corresponding individual numbers were 695 (10 m) and 3,125 indiv./0.1 m2 (0 m). The potential role of such fouling communities on artificial structures in the Gulf is discussed.