基于激波捕捉类Boussinesq模型对岛礁地形上波浪传播的数值模拟

为了探究激波捕捉类Boussinesq模型在模拟岛礁地形上规则波和不规则波传播的可行性,采用基于完全非线性Boussinesq方程并具有激波捕捉能力的数值模型Funwave-TVD对规则波和不规则波在岛礁地形上的传播进行了数值模拟,通过与试验数据对比,分析模型中空间步长的影响,验证模型在模拟波高、平均水位分布以及波谱空间演变的能力,结果表明:采用合适的空间步长,模型能较好地模拟规则波和不规则波在岛礁地形上的传播和演化过程。对于规则波,较小的空间步长可改善破碎点处波高峰值的预测,并能更好地预测波浪破碎后波高的空间分布,相比结合经验破碎的Boussinesq模型,Funwave-TVD能更好地模拟规则波在岛礁地形上的破碎,以及破碎以后行进涌波的再生成过程;对于不规则波,Funwave-TVD总体而言能较好地模拟涌浪有效波高、次重力波的生成及空间演化和平均水位,但会低估礁坪上次重力波波高,较粗的空间步长也会低估礁坪上涌浪有效波高。     

不同开口比人工鱼礁体水动力特性及礁体稳定性研究

为研究方型人工鱼礁体开口比的变化对其水动力特性的影响,利用Fluent软件模拟了边长为3m、开口比为0～0.6之间7种不同方型鱼礁体周围水流场,通过分析水流场变化规律得到了礁体流场效应、阻力系数随开口比的变化情况;基于Morison方程计算了礁体在波流作用下的受力及其抗滑移、抗倾覆安全系数。研究结果表明:当礁体开口比小于0.2时,背涡区范围较大,流场效应明显;随着开口比的增大,礁体产生的上升流范围及竖直向最大速度分量逐渐减小;对于方形开口礁体,阻力系数与开口比的关系式为Cd=0.875φ+1.088(R2=0.963,P<0.01);随着开口比的增大,礁体所受最大波流作用力、抗滑移及抗倾覆安全系数逐渐减小,但礁体不会发生滑移和倾覆,可为实际礁体结构的设计提供参考。     

Towards new applications of underwater photogrammetry for investigating coral reef morphology and habitat complexity in the Myeik Archipelago,Myanmar

Photogrammetry represents a non-destructive, cost-effective tool for coral reef monitoring, able to integrate traditional remote sensing techniques and support researchers’ work. However, its application to submerged habitats is still in early stage. We present new ways to employ Structure from Motion techniques to infer properties of reef habitats. In particular, we propose the use of Digital Surface Models and Digital Terrain Models for assessing coral colonies extension and height and discriminating between seabed and coral cover. Such information can be coupled with digital rugosity estimates to improve habitat characterization. DTM, DSM and orthophotos were derived and used to compute a series of metrics like coral morphologies, reef topography, coral cover and structural complexity. We show the potentialities offered by underwater photogrammetry and derived products to provide useful basic information for marine habitat mapping, opening the possibility to extend these methods for large-scale assessment and monitoring of coral reefs.     

Deep-sea reef fish assemblage patterns on the Blake Plateau(Western North Atlantic Ocean)

Deep‐water coral habitats are scattered throughout slope depths (360–800 m) off the Southeastern United States (SEUS, Cape Lookout, North Carolina, to Cape Canaveral, Florida), contributing substantial structure and diversity to bottom habitats. In some areas (e.g. off North Carolina) deep corals form nearly monotypic (Lophelia pertusa) high profile mounds, and in other areas (e.g. off Florida) many species may colonize hard substrata. Deep coral and hard substrata ecosystems off the SEUS support a unique fish assemblage. Using the Johnson‐Sea‐Link submersible (in 2000–2005, 65 dives), and a remotely operated vehicle (in 2003, five dives), fishes were surveyed in nine deep reef study areas along the SEUS slope. Forty‐two benthic reef fish species occurred in deep reef habitats in these study areas. Species richness was greatest on the two coral banks off Cape Lookout, North Carolina (n = 23 and 27 species) and lowest on the two sites off Cape Canaveral, Florida (n = 7 and 8 species). Fish assemblages exhibited significantly (ANOSIM, Global R = 0.69, P = 0.001) different patterns among sites. Stations sampled off North Carolina (three study areas) formed a distinct group that differed from all dives conducted to the south. Although several species defined the fish assemblages at the North Carolina sites, Laemonema barbatulum, Laemonema melanurum, and Helicolenus dactylopterus generally had the most influence on the definition of the North Carolina group. Fish assemblages at three sites within the central survey area on the Blake Plateau were also similar to each other, and were dominated by Nezumia sclerorhynchus and L. melanurum. Synaphobranchus spp. and Neaumia sclerorhynchus differentiated the two southern sites off Cape Canaveral, Florida, from the other station groups. Combinations of depth and habitat type had the most influence on these station groups; however, explicit mechanisms contributing to the organization of these assemblages remain unclear.     

不同形状和材料的鱼礁模型对短蛸诱集效果的初步研究

采用鱼类行为学方法,观测了短蛸(Octopus ocellatus)对同为PVC材质的3种形状的有孔和无孔模型礁以及对同为管状的3种不同材料的单体和叠加模型礁的行为反应,并对各组内模型礁的诱集效果进行了比较.实验结果表明:未投放模型礁条件下短蛸在水槽四角分布率较高,在鱼礁标志区分布率只有0.5%;PVC材质3种形状的模型礁放入后对短蛸的聚集率均在10%以上,其中内部空间最大的正方体模型礁聚集率最大,每种形状的模型礁中有孔模型礁聚集率高于无孔;3种不同材料的管状模型礁放入后诱集效果均较明显,其中陶瓷材质的管状模型礁效果最好,每种材料的模型礁中3单体叠加后的组合礁聚集率明显高于单体,其中叠加后的陶瓷模型礁对短蛸的聚集率达到39.3%;研究发现短蛸的领域行为对鱼礁模型的诱集效果影响较大.     

雷州半岛灯楼角珊瑚礁海区夏季的浮游动物

2004年8月在雷州半岛灯楼角珊瑚礁海区分别使用浅水Ⅰ型和浅水Ⅱ型浮游生物网进行了浮游动物调查,共鉴定浮游动物72种和浮游幼虫19个类群(或类型),其中桡足类的种数最多达45种。结果表明,浮游动物种数分布由近岸往远岸递增,约3/4的种类属于终身浮游生物,1/4属于阶段性浮游生物。中小型的浮游动物种类多,数量大。两种网具采集的浮游动物总种数、总密度、多样性指数、均匀度和中小型优势种的密度差异相当显著,而大型优势种的密度差异不明显。用浅水Ⅱ型网采集的浮游动物总密度平均值为5270ind/m3,是浅水Ⅰ型网的110倍。桡足类占浮游动物总密度的72.45%,其次幼虫占23.41%。浮游动物密度呈斑块状分布,最高达16257ind/m3,底质为珊瑚礁的测站的浮游动物数量一般较多。优势种主要是中小型种类和底栖动物的幼虫,如强额孔雀哲水蚤、蔓足类无节幼虫、细长腹剑水蚤、驼背隆哲水蚤、无节幼虫、双壳类面盘幼虫、桡足幼体、简长腹剑水蚤等。     

Microbial photosynthesis in coral reef sediments (Heron Reef, Australia)

We investigated microphytobenthic photosynthesis at four stations in the coral reef sediments at Heron Reef, Australia. The microphytobenthos was dominated by diatoms, dinoflagellates and cyanobacteria, as indicated by biomarker pigment analysis. Conspicuous algae firmly attached to the sand grains (ca. 100 μm in diameter, surrounded by a hard transparent wall) were rich in peridinin, a marker pigment for dinoflagellates, but also showed a high diversity based on cyanobacterial 16S rDNA gene sequence analysis. Specimens of these algae that were buried below the photic zone exhibited an unexpected stimulation of respiration by light, resulting in an increase of local oxygen concentrations upon darkening. Net photosynthesis of the sediments varied between 1.9 and 8.5 mmol O₂ m⁻² h⁻¹ and was strongly correlated with Chl a content, which lay between 31 and 84 mg m⁻². An estimate based on our spatially limited dataset indicates that the microphytobenthic production for the entire reef is in the order of magnitude of the production estimated for corals. Photosynthesis stimulated calcification at all investigated sites (0.2–1.0 mmol Ca²⁺ m⁻² h⁻¹). The sediments of at least three stations were net calcifying. Sedimentary N₂-fixation rates (measured by acetylene reduction assays at two sites) ranged between 0.9 to 3.9 mmol N₂ m⁻² h⁻¹ and were highest in the light, indicating the importance of heterocystous cyanobacteria. In coral fingers no N₂-fixation was measurable, which stresses the importance of the sediment compartment for reef nitrogen cycling.     

Spatial and temporal patterns of seagrass habitat use by fishes at the Ryukyu Islands,Japan

To investigate whether or not regional–temporal patterns of seagrass habitat use by fishes existed at the Ryukyu Islands (southern Japan), visual surveys were conducted in seagrass beds and adjacent coral reefs in northern, central, and southern Ryukyu Islands, in November 2004, and May, August, and November 2005, the northern region having less extensive seagrass beds compared with the central and southern regions. During the study period, the seagrass beds were utilized primarily by 31 species, the densities of some of the latter differing significantly among regions. With the exception of Apogonidae and Holocentridae, all species were diurnal and could be divided into 6 groups based on seagrass habitat use patterns; (1) permanent residents A (10 species, e.g. Stethojulis strigiventer), juveniles and adults living in seagrass beds as well as other habitats; (2) permanent residents B (5 species, e.g. Calotomus spinidens), juveniles and adults living only or mainly in seagrass beds; (3) seasonal residents A (4 species, e.g. Cheilodipterus quinquelineatus), juveniles living in seagrass beds as well as other habitats; (4) seasonal residents B (6 species, e.g. Lethrinus atkinsoni), juveniles living only or mainly in seagrass beds; (5) transients (5 species, e.g. Parupeneus indicus), occurring in seagrass beds in the course of foraging over a variety of habitats; and (6) casual species (1 species, Acanthurus blochii), occurring only occasionally in seagrass beds. Regarding temporal differences, juvenile densities in each group were high in May and August compared with November in each region, whereas adult densities did not differ drastically in each month. For regional differences, juvenile and adult densities of permanent residents A and B were higher in the southern and central regions than in the northern region. Moreover, some seasonal residents showed possible ontogenetic habitat shift from seagrass beds to coral reefs in each region. These results indicated that seagrass habitat use patterns by fishes changed temporally and regionally and there may be habitat connectivity between seagrass beds and coral reefs via ontogenetic migration in the Ryukyu Islands.     

Diurnal variability in turbidity and coral fluorescence on a fringing reef flat: Southern Molokai,Hawaii

Terrigenous sediment in the nearshore environment can pose both acute and chronic stresses to coral reefs. The reef flat off southern Molokai, Hawaii, typically experiences daily turbidity events, in which trade winds and tides combine to resuspend terrigenous sediment and transport it alongshore. These chronic turbidity events could play a role in restricting coral distribution on the reef flat by reducing the light available for photosynthesis. This study describes the effects of these turbidity events on the Hawaiian reef coral Montipora capitata using in situ diurnal measurements of turbidity, light levels, and chlorophyll fluorescence yield via pulse-amplitude-modulated (PAM) fluorometry. Average surface irradiance was similar in the morning and the afternoon, while increased afternoon turbidity resulted in lower subsurface irradiance, higher fluorescence yield (ΔF/F_m^′), and lower relative electron transport rates (rETR). Model calculations based on observed light extinction coeffecients suggest that in the absence of turbidity events, afternoon subsurface irradiances would be 1.43 times higher than observed, resulting in rETR for M. capitata that are 1.40 times higher.     

Gradients in coral reef communities exposed to muddy river discharge in Pohnpei,Micronesia

This study analyzed how coral communities change along a gradient of increasing exposure to a mud-discharging river in the Enipein Catchment, Pohnpei, Micronesia. Using video transects, we quantified benthic communities at five sites along a gradient moving away from the river mouth towards the barrier reef. The most river-impacted site was characterized by a high accumulation of mud, low coral cover and low coral diversity. Although coral cover leveled off at ∼400 m from the river mouth to values found at the outer-most sites, coral diversity continued to increase with increasing distance, suggesting that the most distant site was still impacted by the river discharges. Fungiidae, Pavona, Acropora, Pachyseris and Porites rus all significantly increased in cover with distance from the river, while Turbinaria decreased. The combined presence and abundance of these six species groups, together with coral species richness, may help to indicate the effects of terrestrial runoff in similar runoff-exposed settings around Micronesia, whereas coral cover is not a sensitive indicator for river impact. Coral reefs are important resources for the people of Pohnpei. To prevent further degradation of this important resource, an integrated watershed approach is needed to control terrestrial activities.