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Spatial (10 different locations) and temporal (2 years) changes in characteristics of the Marmara Sea Sediments were monitored to determine interactions between the chemical and microbial diversity. The sediments were rich in terms of hydrocarbon, nitrate, Ni and microbial cell content. Denitrifying, sulfate reducing, fermentative and methanogenic organisms were co-abundant in 15 cm below the sea floor. The local variations in the sediments’ characteristics were more distinctive than the temporal ones. The sulfate and nitrate contents were the main drivers of the changes in the microbial community compositions. N and P were limited for microbial growth in the sediments, and their levels determined the total cell abundance and activity. Seasonal shifts in temperatures of the shallow sediments were also reflected in the active cell abundances. It was concluded that the Marmara Sea is a promising ecosystem for the further investigation of the ecologically important microbial processes. 相似文献
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高通量测序技术广泛应用于环境真核微生物多样性的研究,可检获较之传统形态学方法更高的多样性。然而,检获的高分子多样性与基于形态的物种多样性在构成上的差异仍然不明。本研究首次对比分析了基于形态学的南黄海沉积物中的纤毛虫物种多样性与基于核糖体18S DNA和c DNA高通量测序的多样性异同。结果表明:形态鉴定获得8纲、20目、30科、36属共97种纤毛虫;DNA测序检获10纲、28目、55科、76属共174个OTUs;而通过c DNA测序获取的纤毛虫多样性最高,获10纲、31目、68科、99属共284个OTUs。研究发现,形态学方法检获的纤毛虫均为底栖生纤毛虫;两种分子手段检获的多样性更高,群落结构更为近似,覆盖了形态鉴定所获的绝大部分类群。但DNA测序还检获了序列比例高达90%的浮游类群,可能源于包囊或死亡沉降的物种;而c DNA测序检获了约7%的浮游纤毛虫序列。较之DNA测序,c DNA法检获的底栖纤毛虫在群落结构上与形态学结果更为接近。本研究表明,分子手段有助于更全面地揭示沉积物中的纤毛虫多样性,DNA测序可同时揭示休眠包囊、胞外DNA及过去群落的信息,而c DNA测序在研究活动纤毛虫多样性上更有优势。 相似文献
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Macrophyte community diversity and composition respond to ecosystem conservation and local environmental factors. In this study, we developed a multidimensional diversity framework for macrophyte communities, including the taxonomic and functional alpha and beta diversity. We used the framework to explore the relationships among water level regimes and these diversity parameters in a case study of China's Baiyangdian Lake. Analysis of indicators of hydrologic alteration divided the water level from 1959 to 2019 into four regimes (dry, <6.42 m; low, 6.42–7.23 m; medium, 7.23–8.19 m; high, >8.19 m). Alpha and beta diversity were significantly higher in the medium regime than in the low and high regimes. Redundancy analysis indicated that the maximum water depth significantly affected taxonomic alpha diversity, and total nitrogen (TN) and chemical oxygen demand (COD) concentration significantly affected functional alpha diversity, respectively. Mantel tests showed that TN, Secchi depth (SD), and water depth in the high water level regime significantly increased the total beta diversity and turnover components. TN was the main factor that increased total taxonomic beta diversity. Water level regime mainly influenced interspecific relationships by changing the TN and COD concentration. The water level should be maintained between the medium and high water level regimes to promote restoration of the macrophyte community and improve ecosystem stability. The biodiversity evaluation framework would provide a deeper insight into the hydrological process management for restoration of aquatic macrophyte communities in shallow lakes. 相似文献
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Genetic diversity analysis with ISSR PCR on green algae Chlorella vulgaris and Chlorella pyrenoidosa
沈颂东 《中国海洋湖沼学报》2008,26(4)
In the present study, genetic polymorphism and diversity in unicellular clones of Chlorella vulgaris Beijerinck and Chlorella pyrenoidosa Chick were studied with Inter Simple Sequence Repeats PCR (ISSR PCR). Samples including four clones of C. vulgaris and three clones of C. pyrenoidosa were purified by single-clone-choice method. For four C. vulgaris unicellular clones, the total number of the bands scored for 18 primers was 298; and the number of the polymorphic bands was 118, of which 39.6% were polymorphic. The size of PCR products ranged from 200 to 2 500 bp. The total number of bands scored for 18 primers, the number of polymorphic bands and the percentage of three C. pyrenoidosa unicellular clones was 194.83 and 30.8%, respectively. POPGENE analysis show that the average Nei genetic diversity (h *) and Shannon index of diversity (I *) in the four C. vulgaris unicellular clones was 0.2181 and 0.3208, respectively, which is slightly higher than those of the three C. pyrenoidosa unicellular clones (0.190 3 and 0.274 8), which agreed with the percentage of polymorphic bands in the mixed samples of the two species. The results suggest that ISSR is a useful method to Chlorella for intra-species genetic analysis. 相似文献
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垫状植物是高寒地区广泛分布的一类具有特殊形态的植物,被称为高寒生态系统工程师,其在高寒退化草地中的作用如何?本研究以位于西藏当雄念青唐古拉山脉南坡4500m的一处高寒退化草地为例,调查了垫状点地梅覆盖区域内外的物种多样性、土壤养分以及水分的差异。结果表明:垫状点地梅可以显著改善土壤养分,提高幅度大约为16%-48%,其中有机质和总氮(N)分别增加了16.2%和18.9%;局部土壤含水量提高约12%;样方内的物种丰富度(S)、Shannon-Wiener指数(H)和Simpson指数(D)都随着垫状点地梅盖度的增加而呈增加的趋势。垫状点地梅在退化草地中具有显著的改善土壤微环境和提高群落物种多样性的作用,应加强保育以促进高寒退化草地的恢复。 相似文献
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水体和沉积物是湖泊生态系统中迥异但又紧密相连的两类生境,栖息在这两类生境中的细菌在维持生态系统平衡和驱动元素循环中起着关键性作用。为了探究湖泊水体和沉积物细菌群落的分布格局,本文对太湖四个湖区水体和沉积物中细菌群落进行调查,基于高通量测序技术和统计分析手段,分析这两类生境中的细菌群落组成和多样性水平、分布特征及其驱动因素。结果表明:放线菌门(Actinobacteria)、变形菌门(Proteobacteria)和蓝细菌门(Cyanobacteria)是水体细菌群落中最主要的细菌门,而沉积物中Proteobacteria占据优势地位。在两类生境中,太湖西部区域细菌群落丰富度和独特性(LCBD)相对较高,各区域群落结构表现出显著性差异。对水体而言,电导率、pH值、PC1(重金属组成)和沉积物孔隙度是驱动细菌丰富度的重要因子,PC1、水温及pH值是影响细菌群落LCBD的重要因子,而细菌网络复杂性随pH值的增加而增加,且在高pH环境中占主导地位;对沉积物而言,其丰富度和LCBD的重要影响因子均是沉积物中总磷和锂,细菌网络复杂性随金属元素施加的环境压力增大而降低,但随总磷、磷酸盐和铵态氮浓度的... 相似文献