Uncertainty in modelling of faecal coliform overland transport associated with manure application in Maryland

Concerns for microbial safety of surface water facilitate development of predictive models that estimate concentrations and total numbers of pathogen and indicator organisms leaving manure‐fertilized fields in overland flow during runoff events. Spatial variability of bacterial concentrations in applied manure introduces high uncertainty in the model predictions. The objective of this work was to evaluate the uncertainty in model predictions of the manure‐borne bacteria overland transport caused by limited information on the spatial distribution of bacteria in surface‐applied manure. Experiments were carried out at the ARS Beltsville experimental watershed site (OPE3) in Maryland. Dairy bovine manure was applied at a 59·3 t/ha rate on the 3·55 hectare experimental field. Faecal coliform (FC) concentrations in manure measured in 2004, 2005, 2007, and 2009 varied by 4 orders of magnitude each year. Both runoff volume and FC concentrations in runoff water were monitored using a runoff flume equipped with a refrigerated pump sampler. Two runoff events occurred before the manure was incorporated into the soil. A bacteria transport add‐on module simulator of transport with infiltration and runoff (STWIR) was linked with the event‐based kinematic runoff and erosion model (KINEROS2) to simulate convective‐dispersive overland transport, bacteria release from manure, reversible attachment–detachment to soil, and surface straining of infiltrating bacteria. The model was successfully calibrated with the field experiment data. Monte Carlo simulations were carried out to account for the spatial variation in FC in applied manure and uncertainty in the FC distribution in manure caused by the small number of samples. A tenfold and twofold variation in FC concentrations in the runoff were obtained within the 90% probability interval when initial FC spatial distributions in the manure were represented by 5 and 29 samples, respectively. Copyright © 2011 John Wiley & Sons, Ltd.     

Stormflow dynamics and loads of Escherichia coli in a large mixed land use catchment

Storm events are major transporters of faecal microbial contaminants, but few studies have reported storm loads or concentration dynamics in relation to discharge or other pollutants, notably fine sediment. Episodically, high loads of faecal contamination during storm flows impact downstream uses of water bodies, particularly contact recreation and shellfish harvesting. We examined the storm dynamics of Escherichia coli, turbidity and discharge in the mixed land use Motueka catchment (2047 km²; 60% forest and 19% pasture) to gain insights into E. coli sources and transport. We also explored different approaches for calculating E. coli loads. Discharge and field turbidity were recorded continuously, and E. coli concentrations were sampled during events, over a 13‐month period near the mouth of the Motueka River. E. coli loads were estimated by interpolation, averaging estimators and by using linear regression with smearing correction of the log‐transformed variables: discharge, turbidity, and both turbidity and discharge. The annual E. coli load was dominated (～98%) by export during events. Comparison of monthly monitoring with the intensive storm monitoring campaign suggests that simple stratification of the sampling into storm and baseflow would greatly improve export estimates. E. coli peak concentrations always preceded discharge and turbidity peaks (which had similar timing). Turbidity can be a useful surrogate for faecal microbes in smaller catchments, but in the Motueka turbidity was no better for predicting E. coli concentration than discharge. Runoff from grazed pasture and direct deposition from livestock are probably the ultimate E. coli sources in the Motueka catchment. However, in‐channel stores seem to dominate E. coli dynamics during events and account for the typical feature of bacterial concentrations peaking ahead of discharge and turbidity. This study demonstrates the importance of storm events to faecal microbial loads and shows that E. coli concentration dynamics may contrast with those of turbidity. Copyright © 2009 John Wiley & Sons, Ltd.     

砂粒粒径与砂层厚度对单体筐养养殖系统中三疣梭子蟹(Portunus trituberculatus)幼蟹摄食行为与生长特性的影响研究

建立了以经过遗传改造的发光细菌Acinetobacter sp. RecA为受试物种的环境污染物遗传毒性快速检测方法,该方法最快可在3h内得到毒性评价结果。采用该方法评价了环渤海排污口12份污水样品的遗传毒性。环渤海12个排污口的污水样品均表现出了不同水平的遗传毒性,并呈现出一定的分布特征。其中,高毒水质集中出现在山东半岛污水样品中,中毒水质集中出现在辽东半岛地区,而低毒水质主要集中于京津冀地区。综上,在环渤海的污水样品遗传毒性检测中,这种新型发光细菌法具有快速、灵敏、简便等优点,为以后近海环境的水质生物毒性检测提供了参考依据,具有应用于近海环境水质快速监测与评价的潜力。     

Diet of Haplognathia ruberrima (Gnathostomulida) in a Caribbean marine mangrove

Haplognathia ruberrima is a cosmopolitan gnathostomulid species found in sulfur bacterial mats in mangroves in Guadeloupe (French West Indies). Haplognathia ruberrima presents a δ¹³C value lower than all measured meiofaunal grazers and lower than the available measured food sources of this environment. This low δ¹³C value can not be due to specific ingestion of ¹³C‐depleted methanogenic bacteria because abundances of those bacteria are reduced in surficial and deep sediments as revealed by δ¹³C of bacterial fatty acid. According to scanning electron microscope observations, no bacterial ectosymbionts were observed at the surface of the gnathostomulids, and transmission electron microscope views revealed the absence of bacterial endosymbionts. Energy‐dispersive X‐ray spectroscopy analysis detected low levels of sulfur (0.32%±0.8) in biological tissues of H. ruberrima, confirming the absence of thioautotrophic bacterial symbionts in these animals. Consequently, the low δ¹³C value of H. ruberrima can not be due to the presence of sulfur‐oxidizing symbionts but more probably to the selective and exclusive consumption of free‐living, sulfur‐oxidizing bacteria.     

盐田嗜盐单胞杆菌的分离鉴定及其PHB 积累的研究

微生物聚合物聚-?-羟基丁酸酯(PHB)具有良好的生物降解性、生物相容性和热塑性,在环保、医药和农业领域具有广阔的应用前景。高PHB积累菌株的获得及其发酵条件的研究具有很好的实用价值。作者从渤海湾日晒盐场盐田卤水中分离出一株杆状细菌,经16S r DNA序列测序比对,确定为盐杆菌属(Halomonas),命名为Halomonas 100-16-2,其最适生长盐度为50~100,最适生长p H为7~8,属中度嗜盐菌。在酸水解酪蛋白(7.5 g/L)的基础培养基中分别添加0、10、20和30 g/L葡萄糖,研究盐度100条件下不同葡萄糖添加量对Halomonas 100-16-2生长和PHB含量的影响。结果表明,随着葡萄糖浓度的增加,该菌株的生长和PHB积累显著提高。葡萄糖质量浓度为30 g/L时,细胞干质量达8.60 g/L,PHB含量达到5.57 g/L(即达到细胞干质量的65%)。本研究为渤海湾盐田微生物资源的开发和利用提供了有价值的基础数据。     

墨西哥湾“深水地平线”溢油事故处理研究进展

2010年4月20日美国墨西哥湾"深水地平线"石油钻井平台发生爆炸,并引发大火,致使大量的原油(~500万桶)在深海(~1 500m)泄露,这场灾难造成了巨大的环境和经济损失,也对石油开采业的发展产生了负面影响。文中综述了此次事故溢出石油的总量,泄露速率以及测量相关数据中所涉及的技术及方法,对进一步研究溢油转移的趋势和转化过程具有指导意义。喷洒了6.6×106 L的消油剂,消油剂可以促使溢油的快速分散,同时也会给海洋生态系统造成一定的影响。该事故对墨西哥湾的植被和海洋生物有不同程度的影响,如沼泽植被、海水中的浮游动/植物、鱼类、贝类、珊瑚虫、迁徙鸟类,甚至是墨西哥湾大型底栖生物。此次溢油事故涉及各种不同的环境情况,为研究石油烃降解菌在溢油转移和降解过程中种群和群落的变化提供了一个独特的机会,消油剂处理过的溢油转化机理以及微生物降解过程中生物表面活性剂的产生与生物标志物以及微生物菌落的变化之间的关系,仍需要进一步的深入研究和探讨。     

溶藻细菌MS7的分类鉴定及其溶藻活性的初步研究

采用形态学、生理生化指标和16SrRNA基因序列同源性分析的方法,对菌株MS7进行鉴定,并通过溶藻试验测定该菌株对铜绿微囊藻(Microcystis aeruginosa)的溶藻活性和溶藻方式。结果表明,MS7菌株为苏云金芽孢杆菌(Bacillus thuringiensis),对铜绿微囊藻具有高效溶藻效果,当菌浓度为108cells/mL,初始藻液叶绿素a浓度为0.7mg/L时,48h溶藻率达到91%。主要通过分泌胞外物质的间接方式溶藻,溶藻物质属于具有很强的热稳定性的非蛋白质类物质。     

生物发光菌技术在地震灾区饮用水源地水质监测中的应用

"5.12"汶川地震发生后,利用生物发光菌技术对阿坝州7个县饮用水源地水质进行综合毒性监测。2008年5月28日到2008年6月12日期间的水质监测结果表明,地震对阿坝州饮用水源地水质并未造成严重污染,当地饮用水源水质正常。     

南极普里兹湾可培养浮游细菌群落结构研究

针对南极普里兹湾内达恩利角附近海域的3个测站共12份海水样品,采用寡营养培养基分离培养极地浮游细菌,通过PCR方法获取其中95株细菌的16S rRNA基因序列。序列分析结果表明,分离获得的95株细菌分属α-变形杆菌纲(Alphaproteobactia)、γ-变形杆菌纲(Gammaproteobacteria)和拟杆菌门(Bacteroidetes)3个类群下的35个不同分类单元,其中α-变形杆菌纲为优势细菌,在不同水层中所占的比例为52.6%—62.5%。通过Shannon多样性指数分析发现,南极普里兹湾陆架区测站P2-14多样性指数较陆坡区两测站P2-11和P2-8的高,细菌多样性与浮游植物量和生产力水平呈现正相关。表层细菌Shannon多样性指数最低,50 m水层最高,100和200 m水层多样性指数变化不明显,真光层水体中细菌垂直分布与营养盐和溶解氧浓度存在关联。此外,采用寡营养陈海水培养基,还获得了一些与已报道的16S rRNA基因序列相似性较低的菌株,它们代表了微生物新物种,可能也是南极真光层特有的细菌。研究工作表明,南极普里兹湾真光层水体中蕴藏着丰富的浮游细菌资源,它们有待保护、开发和利用。     

Marine bacterium strain screening and pyrethroid insecticide-degrading efficiency analysis

A pyrethroid insecticide-degrading bacterium, strain HS-24, was isolated from an offshore seawater environment. The strain, which can degrade cypermethrin(CYP) and deltamethrin(DEL), was identified as Methylophaga sp. The optimal culture and degradation conditions for CYP and DEL by strain HS-24 is pH 7 at 28°C. Under optimum culture conditions, strain HS-24 exhibited a broad degradation concentration range of 100, 200, 400, 600, and 800 mg/L for CYP and DEL. The metabolic intermediates were analyzed by NMR, which provided strong evidence that CYP and DEL removal occurred mainly because of a biological process. The toxicity of the degradation products of strain HS-24 was studied simultaneously by measuring the light output of the luminescence bacterium. This demonstrated that the biodegradation ability of strain HS-24 significantly decreased the toxicity of CYP- and DEL-contaminated aquaculture seawater. Finally, the findings of this paper indicate that strain HS-24 is thus revealed as a biological agent for the remediation of marine aquatic environments.