基于微卫星标记的洞庭青鲫与三个鲫品系群体遗传多样性分析

选取12个微卫星标记对洞庭青鲫(Carassius auratus var.Dongtingking)、野生二倍体和三倍体鲫(C.auratus)、彭泽鲫(C.auratus var.pengzesis)4个鲫品系群体进行遗传多样性检测。在12个基因座位中,共检测出78个等位基因,其中14个为共有等位基因;每个座位检测到等位基因4—12个,平均等位基因数6.58个;4个鲫品系群体的平均观测杂合度(Ho)分别为0.633、0.750、0.800、0.717;平均期望杂合度(He)分别为0.502、0.713、0.757、0.602;平均多态信息含量(PIC)分别为0.364、0.599、0.637、0.470。上述结果表明,野生二倍体和三倍体鲫的遗传多样性较为丰富,以三倍体鲫的遗传多样性为最高;而洞庭青鲫和彭泽鲫养殖群体存在杂合度降低,遗传多样性下降的现象,以洞庭青鲫的遗传多样性为最低。基于遗传距离构建的UPGMA聚类树表明,洞庭青鲫与彭泽鲫两个养殖群体聚为一支,而二倍体与三倍体野鲫群体聚为另一支,说明洞庭青鲫与彭泽鲫之间亲缘关系较近,野生二倍体与三倍体鲫之间的亲缘关系较近。研究不同倍性鲫品系的遗传多样性,对于探讨鲫的多倍体起源演化以及鲫品系的种质资源保护和选育种实践具有重要意义。     

我国氨氮海水质量基准的探讨

我国现行的氨氮海水质量标准参照国外基准与标准制定,未考虑是否能够有效保护中国海洋物种,科学性欠缺。对我国海水氨氮质量基准进行研究,采用美国EPA推荐的物种敏感度排序(SSR)技术,结合美国海水氨氮水质基准数学模型,搜集利用我国15种海水水生生物的非离子氨毒性数据,根据非离子氨氮和总氨氮转换公式,得出水体在不同pH值、温度和盐度条件下的总氨氮水质基准在pH为7.0~9.0、温度为0~30℃的范围内,盐度为10时,基准最大浓度(CMC)和基准连续浓度(CCC)的范围分别为0.089~57.141 mg/L与0.007~4.365 mg/L;盐度为20时,CMC和CCC的范围分别为0.092~61.152 mg/L与0.007~4.671 mg/L;盐度为30时,CMC和CCC的范围分别为0.095~65.446 mg/L与0.007~4.999 mg/L;3个环境因子,对CCC和CMC的影响程度由大到小依次为:pH、温度、盐度。相对于美国,我国急性基准的取值区间收缩了5倍,慢性基准的取值区间收缩了10倍。研究结果认为,现行的非离子氨数值应修正为0.007 mg/L才能有效保护我国海洋生物,同时建议使用总氨氮的基准来管理海水中氨氮变化。为修订我国氨氮海水质量标准提供了科学依据。     

Study on genetic diversity and resource conservation of amphioxus (Branchiostoma balcheri Gray) population

1 Introduction Branchiostom a belcheri G ray (am phioxus) is aprecious m arine species listed in the nationalprotectedanim als ofsecond class (H uang etal., 1999). Itbe-longs to the subphylum cephalochordata ofthe phylumvertebrata. A m phioxus is the ancestor of vertebrates5×108 a ago, and is a typical transitionalsam ple ofevolution from invertebrates to vertebrates. The re-search of am phioxus,therefore,is ofgreatim portanceboth for anim al taxonom y and organic evolution(N ozakiand G or…     

嵊泗列岛海域三种贻贝贝体框架性状对壳重的影响效应

以嵊泗列岛海域2+龄厚壳贻贝同生群养殖个体、同域生长的1+龄紫贻贝同生群养殖个体以及混于厚壳贻贝和紫贻贝养殖筏架中的"杂交贻贝"为实验对象,以壳宽SW、壳长SL、壳高SH(BD)、OA(壳顶至韧带末端的直线距离)、OB(壳顶至壳背面最高点的直线距离)、OC(壳顶至壳后端最远点的直线距离)、OD(壳顶至壳高性状在腹缘的落点的直线距离)、AB(韧带末端至壳背缘最高点的直线距离)、BC(壳背缘最高点至壳后端最远点的直线距离)、CD(壳后端最远点至壳高性状在腹缘的落点的直线距离)为贝体框架变量,采用多元分析方法系统比较了三者贝体框架性状对壳重的影响效应。结果表明:(1)3种实验贝壳重的变异系数均大于各贝体框架性状,"杂交贻贝"各测定性状的变异系数均为最大,而厚壳贻贝和紫贻贝间则均接近;(2)3种实验贝各贝体框架性状与壳重的相关系数均达到极显著水平(P0.01),三者中仅"杂交贻贝"各贝体框架性状间的相关系数也均达到极显著水平(P0.01);(3)经通径分析,厚壳贻贝被保留的3个贝体框架性状与壳重的复相关指数为0.868,它们对壳重的直接作用呈OCSHSW,紫贻贝被保留的2个贝体框架性状与壳重的复相关指数为0.700,它们对壳重的直接作用呈OCSW,"杂交贻贝"被保留的3个贝体框架性状与壳重的复相关指数为0.931,它们对壳重的直接作用呈SLSHOA;(4)经多元回归分析,得到了用于估算厚壳贻贝、紫贻贝和"杂交贻贝"壳重的回归方程。     

草鱼种质退化相关SRAP分子标记的筛选

采用相关序列扩增多态性（sequence-reared amplified polymorphism，SRAP）技术分析野生草鱼和家养草鱼，并筛选与草鱼种质退化相关的分子遗传标记。共进行88对引物组合的检测，产生标记数目共计905个。依据标记在群体中出现的频率和变化规律，共筛选出21个可能与种质相关的特异性标记，对这些特异性标记进行测序并将测序结果进行BLAST分析，发现测得片段中有8个片段能在GeneBank中找到同源性较高的序列，而其他片段与数据库中序列的相似性较低。     

Distribution of aromatic steroids in geological samples: their evaluation as geochemical parameters

The distribution of ring-C monoaromatic and triaromatic steroid hydrocarbons of about fifty crude oils and sediments of various origins and ages were studied in order to test their validity as geochemical source and maturity parameters. Three ratios appeared to be useful maturity parameters, i.e. A/B cis to trans isomers in non-rearranged monoaromatics, mono/triaromatics and shortvs long-chain homologues. Four other variations may be considered as source parameters depending upon lithology or other palaeo-environmental conditions, i.e. rearranged vs non-rearranged monoaromatics, 5β/5α -methyl rearranged monoaromatics, carbon number distribution and occurrence of a yet unknown series of methylated triaromatic steroids. 5α-Methyl rearranged monoaromatics seem to be particularly important in anhydrites from sabkha environments. Recent identification of most aromatic steroid constituents occurring in geological samples confers on this class of compounds an increasing value as correlation parameters in geochemical studies.     

Immunological studies on microbial mats from Solar Lake (Sinai)— A contribution to the organic geochemistry of sediments

Immunological and biochemical techniques were used to investigate organic matter in microbial mats from Solar Lake (Sinai, Egypt). Antibodies, elicited in rabbits against samples taken at different depths from a core of these mats, were used for the detection of immunological determinants preserved in these samples. Special attention was given to an antiserum directed against a top mat fraction (3–10 mm depth) and an antiserum against a fraction from a lower section of the core (380–390 mm depth). Both antisera, tested in a dot-blot immunobinding assay, were found to give positive reactions with organic matter from different depths of the sediment. An immunohistochemical experiment with the antisera points to antigenic determinants on Recent and subfossil sheaths of Microcoleus. In addition, extracts of sediment samples were submitted to electrophoresis in polyacrylamide gels in order to characterize the separated macromolecules by immunological means. The results showed a rapid decrease in the number of antigenic determinants from Recent to subfossil samples. However, even in the deepest layers of the sediment (690–700 mm depth) intact biopolymers were detected.     

Development of microsatellite loci for two Agabus diving beetle species from the pooled DNA and testing their utility in mountain lake populations

Diving beetles (Dytiscidae) are the most speciose water beetle group, occurring on all continents except Antarctica. They inhabit various lotic and lentic habitats and play an important role in ecosystem functioning. In this study, we developed functional polymorphic microsatellites for two widely distributed species from one of the most diversified dytiscid genus Agabus: Agabus bipustulatus (Linnaeus, 1767) and Agabus cf. guttatus from the Agabus guttatus group sensu Foster and Bilton (1997). For microsatellites development, pooled DNA and NGS pyrosequencing were used. Microsatellites are still very useful genetic markers for studying recent population changes, but for dytiscids, highly diversified and ecologically important group of freshwater invertebrates, only 8 microsatellite loci are available for one North American species. To test utility of the developed markers, we used several populations of alpine lakes, situated in the Tatra Mountains (Western Carpathians). From the 60 tested markers, 13 loci for Agabus bipustulatus and 8 loci for A. cf. guttatus showed polymorphism. The number of alleles per locus varied from 2 to 10 and no significant linkage disequilibrium was observed. Observed/expected heterozygosity varied from 0/0.077 to 1/0.834 within populations of A. cf. guttatus and from 0/0.056 to 1/0.837 within populations of A. bipustulatus. The significant deviation from HWE was probably caused by presence of null alleles or undetected biological processes. Bayesian cluster analysis revealed differences in the cluster proportions, confirming applicability of the developed markers for future studies of population structure of both Agabus species.     

基于种特异性PCR及线粒体基因标记的天津沿海牡蛎物种多样性研究

天津位于渤海湾西北部,海岸线长,牡蛎生物量大,但是关于天津海区牡蛎种类组成未见有详细报道。为了解此地区牡蛎物种多样性情况,本研究对天津沿海自南至北5个地点随机采集了约230个野生牡蛎,结合形态学和分子生物学手段,利用种特异性(Species-specific)PCR分子标记及COI基因序列详细地分析了牡蛎物种组成。种特异性PCR可以快速鉴定并确认牡蛎种类,结果表明天津沿海牡蛎优势种为北方常见种长牡蛎Crassostrea gigas gigas,另外一种不能通过种特异性PCR确定,但经形态鉴定及COI基因片段的Genbank Blast比对,确定其为猫爪牡蛎Crassostrea talonata。综合形态学和分子生物学手段,研究结果表明大神堂有长牡蛎和猫爪牡蛎两种牡蛎,其余4个地点的牡蛎均为长牡蛎。总体来看,天津沿海牡蛎物种多样性较低,这与北方沿海潮间带牡蛎生长的生态环境如水温、盐度等有关。本研究采集的牡蛎个体普遍偏瘦小,可能与沿海频繁的人为采捕有关,此结果为我国天津沿海牡蛎的种类、分布及其他相关研究提供了参考,为野生牡蛎的合理保护提供了依据。