The coral reef crisis: The critical importance of <350 ppm CO2

Temperature-induced mass coral bleaching causing mortality on a wide geographic scale started when atmospheric CO₂ levels exceeded ∼320 ppm. When CO₂ levels reached ∼340 ppm, sporadic but highly destructive mass bleaching occurred in most reefs world-wide, often associated with El Niño events. Recovery was dependent on the vulnerability of individual reef areas and on the reef’s previous history and resilience. At today’s level of ∼387 ppm, allowing a lag-time of 10 years for sea temperatures to respond, most reefs world-wide are committed to an irreversible decline. Mass bleaching will in future become annual, departing from the 4 to 7 years return-time of El Niño events. Bleaching will be exacerbated by the effects of degraded water-quality and increased severe weather events. In addition, the progressive onset of ocean acidification will cause reduction of coral growth and retardation of the growth of high magnesium calcite-secreting coralline algae. If CO₂ levels are allowed to reach 450 ppm (due to occur by 2030-2040 at the current rates), reefs will be in rapid and terminal decline world-wide from multiple synergies arising from mass bleaching, ocean acidification, and other environmental impacts. Damage to shallow reef communities will become extensive with consequent reduction of biodiversity followed by extinctions. Reefs will cease to be large-scale nursery grounds for fish and will cease to have most of their current value to humanity. There will be knock-on effects to ecosystems associated with reefs, and to other pelagic and benthic ecosystems. Should CO₂ levels reach 600 ppm reefs will be eroding geological structures with populations of surviving biota restricted to refuges. Domino effects will follow, affecting many other marine ecosystems. This is likely to have been the path of great mass extinctions of the past, adding to the case that anthropogenic CO₂ emissions could trigger the Earth’s sixth mass extinction.     

The contribution of atmospheric acid deposition to ocean acidification in the subtropical North Atlantic Ocean

The absorption of anthropogenic CO₂ and atmospheric deposition of acidity can both contribute to the acidification of the global ocean. Rainfall pH measurements and chemical compositions monitored on the island of Bermuda since 1980, and a long-term seawater CO₂ time-series (1983–2005) in the subtropical North Atlantic Ocean near Bermuda were used to evaluate the influence of acidic deposition on the acidification of oligotrophic waters of the North Atlantic Ocean and coastal waters of the coral reef ecosystem of Bermuda. Since the early 1980's, the average annual wet deposition of acidity at Bermuda was 15 ± 14 mmol m^− 2 year^− 1, while surface seawater pH decreased by 0.0017 ± 0.0001 pH units each year. The gradual acidification of subtropical gyre waters was primarily due to uptake of anthropogenic CO₂. We estimate that direct atmospheric acid deposition contributed 2% to the acidification of surface waters in the subtropical North Atlantic Ocean, although this value likely represents an upper limit. Acidifying deposition had negligible influence on seawater CO₂ chemistry of the Bermuda coral reef, with no evident impact on hard coral calcification.     

波浪在珊瑚岸礁礁坪上传播变形的数值研究

波浪的传播变形对珊瑚岛礁附近的营养物质输送以及近岸珊瑚沙运动都起着关键的作用,同时也是礁盘顶部建筑物在设计和施工过程中需要重点考虑的因素,因此,对波浪在礁坪上的传播变形进行研究具有重要意义。利用FUNWAVE 2.0数值模型模拟了不规则波浪在不同形状岸礁上的传播变形过程,讨论了礁前斜坡坡度以及珊瑚底面粗糙程度对波浪在礁坪上传播变形的影响。结果显示,随着礁坡斜率增大,不对称度参数绝对值的增长趋势逐渐变缓,波浪在光滑礁坪上的不对称度绝对值要略大于粗糙底面上的值,而不同地形下计算得到的波浪偏度参数则基本相同。说明礁坡坡度对波浪的不对称度特征具有显著影响,礁坪粗糙度的影响则相对较小,而上述因素对波浪偏度的影响则完全可以忽略。给出了考虑这两个影响因素的礁坪区域内波浪偏度和不对称度经验公式。     

Ecohydrographic constraints on biodiversity and distribution of phytoplankton and zooplankton in coral reefs of the Red Sea,Saudi Arabia

An integral concept of ecological research is the constraint of biodiversity along latitudinal and environmental gradients. The Red Sea features a natural example of a latitudinal gradient of salinity, temperature and nutrient richness. Coral reefs along the Red Sea coasts are supported with allochthonous resources such as oceanic and neritic phytoplankton and zooplankton; however, relatively little is known about how the ecohydrography correlates with plankton biodiversity and abundance. In this article we present the biodiversity of phytoplankton and zooplankton in Red Sea coral reefs. Oceanographic data (temperature, salinity), water samples for nutrient analysis, particulate organic matter, phytoplankton and zooplankton, the latter with special reference to Copepoda (Crustacea), were collected at nine coral reefs over ~1500 km distance along the Red Sea coast of Saudi Arabia. The trophic state of ambient waters [as indicated by chlorophyll a (Chl a)] changed from strong oligotrophy in the north to mesotrophy in the south and was associated with increasing biomasses of Bacillariophyceae, picoeukaryotes and Synechococcus as indicated by pigment fingerprinting (CHEMTAX) and flow cytometry. Net‐phytoplankton microscopy revealed a Trichodesmium erythraeum (Cyanobacteria) bloom north of the Farasan Islands. Several potentially harmful algae, including Dinophysis miles and Gonyaulax spinifera (Dinophyceae), were encountered in larger numbers in the vicinity of the aquaculture facilities at Al Lith. Changes in zooplankton abundance were mainly correlated to the phytoplankton biomass following the latitudinal gradient. The largest zooplankton abundance was observed at the Farasan Archipelago, despite high abundances of copepodites, veligers (Gastropoda larvae) and Chaetognatha at Al Lith. Although the community composition changed over latitude, biodiversity indices of phytoplankton and zooplankton did not exhibit a systematic pattern. As this study constitutes the first current account of the plankton biodiversity in Red Sea coral reefs at a large spatial scale, the results will be informative for ecosystem‐based management along the coastline of Saudi Arabia.     

Observer presence may alter the behaviour of reef fishes associated with coral colonies

Although underwater visual census (UVC) is the most frequently used technique for quantifying reef fish assemblages, remote video analysis has been gaining attention as a potential alternative. In the South Atlantic Ocean, Millepora spp. (class Hydrozoa) are the only branching coral species; however, little is known about the ecological role that they play for reef fish communities. We compared these two observation methods (remote video and UVC) to estimate reef fish abundance and species richness associated with colonies of the fire‐coral Millepora alcicornis at Tamandaré Reefs, Northeast Brazil. Additionally, the two different techniques were used to compare species behaviour in association with fire‐corals in order to examine the biases associated with each technique and provide useful information for behavioural ecologists studying fish–coral associations. There were no differences in reef fish abundance or species richness sampled by remote video or UVC. However, a significant difference in the behaviour of associated fish was recorded between the two methods. In the presence of a diver carrying out a UVC, fish were observed spending more time sheltered amongst the coral branches compared with passively swimming on coral colonies with the remote video technique. Specifically, on the remote video recordings agonistic interactions between fish and passive swimming accounted for 33.3% and 22.2% of the census time, respectively. By comparison, when observed by a diver fish spent 34.8% of their time sheltering amongst the coral branches. We demonstrate that both techniques are similarly effective for recording fish abundance and species richness associated with fire‐corals. However, differences were observed in the ability of each method to detect the behaviour of coral‐associated fishes. Our findings show that behavioural ecologists studying complex fish–coral associations need to ensure that their aims are clearly defined and that they choose the most appropriate technique for their study in order to minimize methodological biases.     

Estimation of size at first maturity in two South African coral species

The corals Acropora austera and Platygyra daedalea have been the subject of extensive reproductive and population genetic studies in the iSimangaliso Wetland Park (iSimangaliso), on the KwaZulu-Natal coast, eastern South Africa. Despite this, estimates of size at first maturity in these two species are lacking. This information could be used to provide a baseline to differentiate juveniles from adult sizes of corals, an important factor for assessing the condition of scleractinian communities in reefs. Here, we present the methods followed to provide such estimates for these two hard corals. Using generalised linear models and assuming knife-edge maturity (50% probability), it was estimated that A. austera from iSimangaliso matures at c. 15 cm mean colony diameter (MCD) (95% CI: 9.25–20.75 cm MCD) and P. daedalea matures at c. 7 cm MCD (95% CI: 4.55–8.39 cm MCD). These estimates were comparable to those for tropical species which is remarkable considering the high-latitude nature of the sampled reefs. It is expected that the findings from this study will assist in the assessment of reproduction, recruitment, survival and genetic variation in clonal organisms such as corals, and will provide a baseline to assess the effects of climate change on coral communities in the region.     

海南岛三亚珊瑚礁区大型底栖动物群落特征

为了解海南省三亚市3个典型珊瑚礁区的底栖生物群落现状,并依此反映该区域珊瑚礁生态系统的健康现状和受扰动程度,作者于2011年11月22日~23日在海南岛三亚西岛、鹿回头和亚龙湾3个珊瑚礁自然保护区内采用潜水方法采集底栖动物,并对分析群落的物种组成、优势类群、丰度、生物量、Shannon-Wiener指数、物种丰富度指数和物种均匀度指数以及生物量/丰度比较曲线特征等进行研究。结果共获得三亚珊瑚礁大型底栖动物166种,优势类群为甲壳动物,优势种为珊瑚铠甲虾(Galathea coralliophilus)。调查区底栖动物平均栖息丰度为566.29个/m2,平均生物量为82.146 g/m2;Shannon-Wiener指数、物种丰富度指数和均匀度指数的平均值分别为3.0581、7.9116和0.8494。其中亚龙湾的上述3项指数均高于其他两个采样地点。生物量/丰度比较曲线表明亚龙湾的底栖群落最稳定,受扰动程度最小。     

Microbialite of anoxic condition from Permian-Triassic transition in Guizhou,China

Spherical microfossils are present in the Hindeodus parvus zone of the Lower Triassic in Ziyun,Guizhou Province. They generally range from 0.15 to 0.30 mm across,with micritic wall and filled by micro-sparry calcites,and are evenly scattered in micritic matrix. Their abundance makes the rock as-signed to microbialites. The accompanied organisms include ostracods and algal mat,but no gastro-pods or bivalves. Presence of small (<7 μm) pyrite framboids indicates that this bed formed in anoxic conditions. In some sections,this bed is overlain and underlain by tidal-flat micritic limestone with microgastropods and small burrows. Occurrence only in deposits on reef top indicates that the micro-bial organism was benthic,and needed sunlight in life. The size of the microbial fossil exceeds that of any bacteria or cyanobacteria. Thus,it does not belong to these two phyla. It may belong to lower green algae,and is assigned to a new species in a new genus,Ziyunosphaeridium sinensis gen. et sp. nov. Up to now,the rocks described as microbialites from the Permian-Triassic transition include six types: (1) porous micritic limestone such as that descried from Japan by Sano and Nakashima (1997),(2) limestone with rich globular microfossils such as that described from the Nanpanjiang Basin in China by Lehrmann (1999),(3) dendroidal limestone such as that described from the vicinity of Chongqing by Kershaw et al. (1999),(4) spherical microbial limestone adapted to anoxic environments described from Ziyun,Guizhou reported in this paper,(5) limestone with cyanobacterial fossils such as that described by Wang et al. (2005),and (6) stromatolites. All these microbialites are not reefs in the proper sense,and the argument that Permian reef ecosystems extended into the Mesozoic is incorrect.     

基于QuickBird影像上珊瑚礁发育状况监测实验研究

珊瑚礁生态系统具有很高的生物多样性和重要的生态功能。20世纪80年代以后全球范围内珊瑚礁的大面积退化引起了人们广泛的关注。利用高分辨多光谱QuickBird影像,基于珊瑚礁几何参数与发育指数对南沙典型岛礁发育进行遥感监测,在珊瑚礁体迎风面水域由破波形成的纹理特征表明了海面粗糙度与水下礁坪的发育特性。结果表明,南沙岛礁受地质与气候的影响发育程度不一,半月礁发育较好,发育指数为0.38,仙娥礁发育指数为0.27。建立几何参数等指标能够监测南沙珊瑚礁的发育状况,可对珊瑚礁的保护提供科学依据。     

Biological structures as a source of habitat heterogeneity and biodiversity on the deep ocean margins

Biological structures exert a major influence on species diversity at both local and regional scales on deep continental margins. Some organisms use other species as substrates for attachment, shelter, feeding or parasitism, but there may also be mutual benefits from the association. Here, we highlight the structural attributes and biotic effects of the habitats that corals, sea pens, sponges and xenophyophores offer other organisms. The environmental setting of the biological structures influences their species composition. The importance of benthic species as substrates seems to increase with depth as the complexity of the surrounding geological substrate and food supply decline. There are marked differences in the degree of mutualistic relationships between habitat-forming taxa. This is especially evident for scleractinian corals, which have high numbers of facultative associates (commensals) and few obligate associates (mutualists), and gorgonians, with their few commensals and many obligate associates. Size, flexibility and architectural complexity of the habitat-forming organism are positively related to species diversity for both sessile and mobile species. This is mainly evident for commensal species sharing a facultative relationship with their host. Habitat complexity is enhanced by the architecture of biological structures, as well as by biological interactions. Colony morphology has a great influence on feeding efficiency for suspension feeders. Suspension feeding, habitat-forming organisms modify the environment to optimize their food uptake. This environmental advantage is also passed on to associated filter-feeding species. These effects are poorly understood but represent key points for understanding ecosystems and biodiversity on continental margins. In this paper we explore the contributions of organisms and the biotic structures they create (rather than physical modifications) to habitat heterogeneity and diversity on the deep continental margins.