来自大黄鱼(Pseudosciaena crocea)肠道的弧菌拮抗菌的筛选与鉴定

采用点种法并以副溶血弧菌(Vp1.2164)和溶藻弧菌(Va-Y)为弧菌指示菌,对从健康的大黄鱼肠道内分离的115株细菌进行体外拮抗试验。并对筛选出的拮抗菌进行抗菌谱测定,最后利用VITEK-32细菌快速鉴定系统和16SrRNA基因序列对拮抗菌进行鉴定。结果表明,从中筛选到3株有较强拮抗作用的菌株,编号分别为X1402-1、X1108和X3914,且菌株X1402-1的抗菌作用最强,抗菌谱最广,21株病原指示菌中,对16株均能产生较强的抑制作用,其中对Vp-1.2164的抑菌直径最大,达到28.5mm,对Va-Y的抑菌直径为8.7mm;其次为菌株X1108和X3914,对两种指示弧菌的抑菌直径分别为:12.0mm、9.0mm和0mm、7.2mm。经VITEK-32细菌快速鉴定系统鉴定,3株拮抗菌分别与铜绿假单胞菌,恶臭假单胞菌,地衣芽孢杆菌的相似性均为99%。通过16SrRNA基因序列分析表明,3株拮抗菌分别与类产碱假单胞菌Pseudomonas pseudoalcaligenes(EU419918)、恶臭假单胞菌Pseudomon asputida(FJ440105)和地衣芽孢杆菌Bacillus licheniformis(DQ988136)的16SrRNA基因同源性最高,分别为100.0%、97.5%、99.0%。综合分析试验结果,X1402-1、X1108和X3914分别被确定为类产碱假单胞菌、恶臭假单胞菌和地衣芽孢杆菌。     

Respiration partitioning in contrasting subtidal sediments: seasonality and response to a spring phytoplankton deposition

Biomass and respiration rates of bacteria, nematodes and macrobenthos were estimated in relation to the deposition of the spring phytoplankton bloom at two contrasting sites in the Southern North Sea: one with fine‐grained sediment close to the coastline and another with highly permeable sediments. Sediment community oxygen consumption (SCOC) was also measured. Bacterial biomass was relatively similar at both stations, whereas nematode and macrobenthic biomass were higher in fine‐grained sediment. In fine sediments, bacterial biomass increased quickly after deposition of the phytoplankton bloom, whereas the response of nematodes and macrobenthos was delayed. In coarser sediments, nematodes and macrobenthos also showed a fast response in terms of density and biomass. Respiration in permeable sediments was mainly dominated by bacteria at all periods of the year. Hence, nematode and macrobenthic respiration did not contribute strongly to SCOC. This is in contrast to the patterns observed in finer sediments, where both macrofauna and nematodes were important oxygen consumers as well. Macrobenthos contributed more to total SCOC than did nematodes in winter. However, shortly after the arrival of phytodetritus at the sea floor, nematodes and macrobenthos contributed equally to the total SCOC, indicating that all benthic size classes should be taken into account when investigating marine benthic respiration rates.     

南沙海区沉积物中细菌和古细菌16S rDNA多样性的研究

采用细菌16SrDNA通用引物和PCR扩增等方法,构建了南海南沙海区沉积物16S rDNA文库,并通过RFLP酶切分型对所获得的70个克隆进行测序。从国际分子生物学数据库中调取相关序列,以PAUP4．0分析软件构建序列同源性矩阵和系统发育树图。结果表明,与细菌文库中克隆相似的微生物属于4个细菌类群：变形细菌(Proteobacteria)(60％)、革兰氏阳性细菌(Gram-positivre bacteria)(13％)、浮霉菌(Planetomycetes)(10％)和无硫绿细菌(Green nonsulfur bacteria)(6％),其中变形细菌(包括δ-、γ-和α-变形细菌)是明显的优势类群。采用Blast程序对所有序列基因数据库进行搜索,发现只有一个克隆与已知序列完全相似,说明文库具有极高的多样性。但是对古细菌文库中所获得的克隆子进行二级结构和序列特征分析的结果表明,这些克隆子均为海洋未获培养的细菌,因此在作者的文库中并未有古细菌的发现。     

五种中草药对海洋光合细菌生长影响的研究

研究了不同方式提取的中草药浸提液以及不同添加量的浸提液对海洋先合知菌生长的影响。结果表明对甘草、黄芩、栝楼等中草药水煮法效果较好,而对青蒿、党参等中草药醇提法效果较好,同时发现上述几种中草药对海洋光合细菌的生长均有促进作用。其中添加4.0%,4.0%和1.0%的栝楼、黄苓和党参浸提液的细菌经过120h的培养.细菌数分别比对照组提高了99.1%、68.8%和68.4%,甘草,青蒿.比对照组提高了10.9%和6.9%,其最佳添加量均为0.5%。     

Distribution and sources of surfzone bacteria at Huntington Beach before and after disinfection on an ocean outfall-- a frequency-domain analysis

Fecal indicator bacteria (FIB) were measured approximately 5 days a week in ankle-depth water at 19 surfzone stations along Huntington Beach and Newport Beach, California, from 1998 to the end of 2003. These sampling periods span the time before and after treated sewage effluent, discharged into the coastal ocean from the local outfall, was disinfected. Bacterial samples were also taken in the vicinity of the outfall during the pre- and post-disinfection periods. Our analysis of the results from both data sets suggest that land-based sources, rather than the local outfall, were the source of the FIB responsible for the frequent closures and postings of local beaches in the summers of 2001 and 2002. Because the annual cycle is the dominant frequency in the fecal and total coliform data sets at most sampling stations, we infer that sources associated with local runoff were responsible for the majority of coliform contamination along wide stretches of the beach. The dominant fortnightly cycle in enterococci at many surfzone sampling stations suggests that the source for these relatively frequent bacteria contamination events in summer is related to the wetting and draining of the land due to the large tidal excursions found during spring tides. Along the most frequently closed section of the beach at stations 3N-15N, the fortnightly cycle is dominant in all FIBs. The strikingly different spatial and spectral patterns found in coliform and in enterococci suggest the presence of different sources, at least for large sections of beach. The presence of a relatively large enterococci fortnightly cycle along the beaches near Newport Harbor indicates that contamination sources similar to those found off Huntington Beach are present, though not at high enough levels to close the Newport beaches.     

Geographical distribution of general aerobic heterotrophic bacteria in surficial sediments from the Chukchi Sea and Canadian Basin

This paper determined the abundance of General Aerobic heterotrophic Bacteria(GAB) in surficial sediments from the Chukchi Sea and the Canadian basin by using MPN and discussed their geographical distribution.The result shows that the determination percentages of the GAB were high,even till 100 percentage.The abundance range and averages of GAB for 4℃and 25℃ were from 4.00×102 to 2.40×106,1.71×106 ind.·g-1(wet sample) and from 2.40×105 to 2.40×107,1.10×107 ind.·g-1(wet sample) respectively.Not only the abundance range but also the averages of GAB in 25℃ were higher than that in 4℃.The abundance of GAB in sediments show a tendency that it is roughly greater in the lower latitudinal area than in the higher latitudinal area.The abundance of GAB increased from east to west as for the longitudinal distribution.With the water depth increasing,the abundance of GAB at 4℃ decreased,but GBA at 25℃ is not changed obviously with water depth.It seems that warmer circumstantial temperature is more suitable for some GAB.     

Microscale Response of Sediment Variables to Benthic Disturbance in the Central Indian Ocean Basin

The response of sediment bacteria and biochemical variables to benthic disturbance was investigated in the Central Indian Ocean Basin from cores at nine stations. Generally, bacterial density and biochemical variables declined vertically with depth in the upper layers of the cores. Mechanical disturbance caused by a hydraulic disturber brought about a substantial decrease in total bacterial numbers. However, the numbers of retrievable bacteria increased by two orders of magnitude. The biochemical parameters decreased in quantity with a shift in the linear relationship. The data suggest that abiotic artifacts will directly affect the biomass and biochemistry of the sediment.     

副溶血弧菌菌株1211U的活的非可培养状态

将副溶血弧菌（Ｖｉｂｒｉｏ ｐａｒａｈａｅｍｏｌｙｔｉｃｕｓ）菌株１２１１培养于低温贫养条件下,以平板菌落计数法（ＰＣ）和最大近似数法（ＭＰＮ）检测可培养细菌数,５０￣６０ｄ后表明可培养数下降为零。吖啶橙荧光显微镜直接计数法（ＡＯＤＣ）检测细菌总数,表明细菌总数始终变化不大,而活菌直接计数法（ＤＶＣ）检测到的活菌数保持在１０＾５个／ｍｌ。本实验证明了副溶血弧菌１２１１Ｕ株在一定的条件下或进入活的非     

畜禽养殖粪污水中N、P等含量的研究及对环境影响的分析

根据不同畜禽养殖污水产生系数与污染物平均浓度,计算出不同畜禽养殖粪污中COD、TN和TP的含量。并对畜禽养殖业产生的污染物对环境可能产生的污染影响进行分析。进一步说明畜禽粪污必须要妥善处理,否则会对环境造成危害,尤其是对水环境的影响将是巨大的。     

Comparison of Enterococcus density estimates in marine beach and bay samples by real-time polymerase chain reaction, membrane filtration and defined substrate testing

Currently, densities of Enterococcus in marine bathing beach samples are performed using conventional methods which require 24 h to obtain results. Real-time PCR methods are available which can measure results in as little as 3 h. The purpose of this study was to evaluate a more rapid test method for the determination of bacterial contamination in marine bathing beaches to better protect human health. The geometric mean of Enterococcus densities using Enterolert® defined substrate testing and membrane filtration ranged from 5.2 to 150 MPN or CFU/100 mL and corresponding qPCR results ranged from 6.6 to 1785 CCE/100 mL. The regression analysis of these results showed a positive correlation between qPCR and conventional tests with an overall correlation (r) of 0.71. qPCR was found to provide accurate and sensitive estimate of Enterococcus densities and has the potential to be used as a rapid test method for the quantification of Enterococcus in marine waters.