长江口及毗邻海域粪大肠菌和细菌总数在夏秋季的变化

2005年夏、秋季对长江口及毗邻海域(长江口、杭州湾和舟山海域)进行了粪大肠菌群和细菌总数的调查研究,并分析了近10年来的变化趋势,结果表明:夏季长江口及毗邻海域表层水体分大肠菌数平均值20个/L,仅长江口的西部海域粪大肠菌群数量在40~80个/L之间,其余海域基本未检出;秋季表层水体粪大肠菌群数量平均为101个/L,变幅范围为20~24000个/L,其中横沙一带海域存在1个数量为105个/L以上的高值区;夏季长江口及毗邻海域表层水体细菌总数平均为6.4×102cfu/mL,变幅范围为2.0×102~7.3×103cfu/mL,高值区位于舟山群岛以东海域、长江口的中北部及南部等海域,细菌总数在103cfu/mL以上;秋季表层水体细菌总数平均为4.7×103cfu/mL,明显高于夏季,变幅范围为1.3×103~1.8×104cfu/mL,高值区主要出现在长江口东南部、杭州湾西部、舟山海区的中北部等海域,细菌总数在104~105cfu/mL之间;1996—2005年期间,全海域及各海区粪大肠菌群数量在1999年均达到最高,然后逐渐下降,在1996—1999年间海域的细菌数量呈明显的上升趋势,2000年以后数量逐渐减少,估计与海域的有机污染程度下降有关。     

改进的MVC-NMF算法在高光谱图像解混中的应用

高光谱图像中混合像元的存在不仅影响了基于遥感影像的地物识别和分类精度,而且已经成为遥感科学向定量化发展的主要障碍。MVC-NMF混合像元解混算法不需要假定纯像元的存在,并且在自动提取端元的同时,能够获取每种端元所对应的丰度图,然而该方法收敛速度较慢、效率较低,文中提出利用BBA(Barzilai-Borwein Algorithm)算法来实现MVC-NMF算法的迭代更新,从而提高了算法的效率。实验结果表明:该方法在相同迭代次数条件下比MVC-NMF算法解混的结果好、效率高。     

粤东深澳湾养殖区域异养细菌和弧菌的动态分布

调查于2007年1月至2008年12月进行,对异养细菌和弧菌丰度的时间和空间分布开展了相关的研究,结果显示深澳养殖海湾水体中以上2种被调查菌类的丰度全年变化范围分别为1.20×105―1.27×108cfu·L-1和1.00×103―3.90×105cfu·L-1;底质中的丰度变化范围分别为2.73×104―4.06×107cfu·g-1和3.25×102―7.23×104cfu·g-1.从时间上来看,营养盐类与异养细菌的相关性要强于温度、盐度、pH值和溶氧等物理因素的相关性;而弧菌与物理因素的相关性要强于与营养盐类的相关性.从空间分布来看水体环境的变化要比底质的大,水体中经常出现异养细菌和弧菌丰度的剧烈变化,变化程度也远远高于底质中细菌的变化.而且不同的养殖活动也会很明显地影响异养细菌和弧菌的丰度:S3站位水体中异养细菌的丰度比底质中的高;S5站位的底质中异养细菌和弧菌的丰度都是较高的.龙须菜的养殖可以很明显地改善底质环境,特别是降低底质中对养殖和水质环境有很大负面影响的生物和非生物因子如硫化物和弧菌等.     

拮抗香蕉枯萎病菌海洋细菌的筛选和鉴定

从93份中国南部海域近海海泥样品中分离出1800多株海洋细菌,以对峙培养法,测定海洋细菌对香蕉枯萎菌的拮抗作用,再以琼脂划线培养法(agar streak)测定菌株的抑菌活性,结果表明:约55.6%的菌株对香蕉枯萎菌有一定的拮抗作用,其中58株菌株抑制香蕉枯萎菌生长所形成的抑菌带宽度大于10.0mm,抑菌作用较好,复筛后其中13个菌株形成的抑菌带宽在15.0mm以上。经反复转接和对峙培养,筛选出拮抗效果好、抑菌活性稳定的菌株TC-1,初步鉴定为芽孢杆菌属的细菌,TC-1对14种病原微生物都有较好的抑菌效果。     

黄海冷水团海域微型异养鞭毛虫对异养细菌和蓝细菌摄食作用的初步研究

2006年10月在黄海冷水团海域的三个站点开展了微型异养鞭毛虫、异养细菌和蓝细菌的密度和生物量调查,进行了微型异养鞭毛虫的现场摄食实验,通过荧光标记细菌法和消化系数法获得该海区微型异养鞭毛虫对异养细菌和蓝细菌的摄食率,并估算了微型异养鞭毛虫对异养细菌和蓝细菌现存量及生产力的摄食压。结果显示,微型异养鞭毛虫、异养细菌和蓝细菌的密度分别为0.36×103~1.13×103,0.39×106~1.13×106和0.04×104~3.74×104cells/cm3,温跃层以上明显高于底层。微型异养鞭毛虫对异养细菌的摄食率为5.33~14.89个/(HF·h),对蓝细菌的摄食率为0.26×102~23.10×10-2cells/(HF·h),摄食率随深度而下降。微型异养鞭毛虫每天能消耗9.27%~33.08%的异养细菌现存量和8.12%~16.09%的蓝细菌现存量。同时,微型异养鞭毛虫对异养细菌和蓝细菌的日摄食量各占它们生产力的2.66%~13.10%和8.12%~16.09%。研究表明微型异养鞭毛虫的摄食可能不是秋季黄海冷水团海域浮游细菌及其生产力的主归宿。     

Growth of marine bacteria and ammonium regeneration from substrates in different C: N ratios

Natural assemblages of marine bacteria were chosen in a batch culture experiments. The impact of varying nitrogen substrate concentrations and the substrate C:N ratios (C:N_S) on the bacterial C:N ratio (C:N_B), the bacterial growth efficiency (BGE) and ammonium regeneration was mainly examined. The C:N_S ratios varied from 5:1 (carbon limitation) to 40:1 (nitrogen limitation) with varying combinations of glucose and NO₃^-. The C:N_B ratio had positive relationship with the C:N_S ratio (r=0.93, n=8), whose value was 3.77 when the C:N_S ratio was 5:1 but increased to 6.47 when the C:NS ratio was 40:1. These results indicate that the C:N_B ratio is a potential diagnostic tool for determining the bacterial growth in natural waters controlled by either, carbon or nitrogen. BGE decreased with the declining nitrate concentration and negatively related to C:N_s (r=-0.51, n=8). The average value of BGE was 0.20. This value was a little lower than other reports, which could be induced by the nitrogen source used in our experiments. Finally, regeneration time of ammonium delayed with the increasing C:N_S ratio, which indicates that there were different metabolism mechanisms when bacterial growth was limited by carbon source and nitrogen source.     

A culture-dependent survey of thermophilic bacteria from hot springs in Xiamen area in China

Microbes are believed to play important roles in ecosystem function in many environments. The hot springs of Xiamen Island are close to the Xiamen Sea, and may have some characteristics different from those of inland hot springs. Microbes living in the hot springs of Xiamen may have new characteristics. However, little is known about microbial communities of hot springs close to the Xiamen Sea. A culturedependent survey of microbial population in the Xiamen hot springs was performed by using an approach combining total cellular protein profile identification and 16S rRNA gene sequencing. A total of 328 isolates of bacteria were obtained from liquid and sediment samples from the Xiamen hot springs, including neutrophilic thermophilic bacteria and moderately thermophilic acidophiles. Neutrophilic thermophilic bacteria, which grow at a temperature range of 55—90℃ including Rhodothermus marinus (Strain 1), Thermus thermophilus (Strain 2), Thermus thiopara (Strain 3), Geobacillus stearothermophilus (Strain 4), Geobacillus thermoleovorans (Strain 5), and Pseudomonas pseudoalcaligenes (Strain 6), were recovered by 2216E plates. Moderately thermophilic acidophiles, which can grow at temperatures above 50℃ and a pH range of 1.8—3.5 such as Alicyclobacillus acidoterrestris (Strain 8), Sulfobacillus acidophilus (Strain 9), and Sulfobacillus thermosulfidooxidans (Strain 10), were isolated on selective solid medium containing sulfur and Fe2+. Among these strains, Rhodothermus marinus, Thermus thermophilus and Geobacillus stearothermophilus are not only thermophiles, but also halophiles. One bacterium strain (Strain 6) shared 99% nucleotide sequence homology with Pseudomonas pseudoalcaligenes on the 16S rRNA gene sequence, but was quite different from Pseudomonas pseudoalcaligenes in biological characteristics, suggesting that it may represent a novel thermophilic species. Results indicated that various species of neutrophilic thermophiles and moderately thermophilic acidophiles were widely distributed in the Xiamen hot springs and that Rhodothermus marinus and Thermus thermophilus dominated the cultivable microbial community.     

盐田藻垫细菌的分离及其胞外多糖的初步研究

从连云港台南盐场采集藻垫,在去除底泥等杂物的藻类层中分离出5株不同的细菌(编号为A,B,c,D和E).经VITEK-32鉴定,A和B可能是鲁氏不动杆菌(Acinetobacter lwoffii)或琼氏不动杆菌(Acinetobacter junii),C为溶血巴斯德菌(Pasteurella haemolytica),D为尿素放线杆菌(Actinobacillus ureae),E未鉴定出结果.在所试验的盐度范围内,细菌A、B和C的最适生长盐度都为25,细菌D的最适生长盐度为50～100,细菌E的最适生长盐度为25～50.细菌A,B,C,D和E细菌胞外多糖产率分别为0.628,0.362,0.177,0.269,0.719 g/g细胞干质量.细菌A,B,C,D和E胞外多糖的糖醛酸质量分数分别为5.4%,9.9%,7.4%,9.8%和23.4%,均不含蛋白质,均无乳化.絮凝及凝胶活性.实验结果显示细菌胞外多糖是构成盐田藻垫胶质的重要组成部分,但从其物化性质看,细菌胞外多糖对藻垫的胶结和黏附性没有直接的影响.     

养殖大菱鲆细菌性红体病病原菌的分离与鉴定

从患有红体病的养殖大菱鲆(Scophthalmus maximus)的肌肉中分离得到一株优势菌并记为H1.经人工注射感染证实H1即为引起养殖大菱鲆红体病的病原菌,其半致死量LD50为2.82×105CFU/mL,而低浓度(1.41×103 CFU/mL)没有造成死亡,但注射部位有脓肿现象,注射相同体积1.5%无菌生理盐水的对照组没有明显的症状,注射部位也无异常.革兰氏染色显示该菌为革兰氏阴性,菌体呈杆状,周生鞭毛.综合该菌的形态、常规生理生化特征和API32E鉴定结果,发现H1与迟钝爱德华氏菌的表性特征非常相似,相似率迭到99.9%.在分子水平上对其16SRNA基因序列的测定,同源性分析,结果表明H1与迟钝爱德华氏菌的亲缘关系最近,相似度达到99%.综合上述研究结果,将该菌株初步鉴定为迟钝爱德华氏茵(Edwardsiella tarda).     

宁波北仑港冬季浮游细菌多样性研究

采用分子生物学方法对宁波北仑港冬季水体中的浮游细菌多样性进行了研究.提取水样中细菌基因组总DNA,以细菌16S rDNA通用引物进行PCR扩增,扩增产物经分子克隆、测序与序列分析,对水样中的细菌建立了16S rDNA克隆文库和系统发生树.结果表明,浮游细菌群落具有较高的多样性,34个克隆子分属2个不同的细菌类群,6个克隆子属于未知类群,优势细菌类群为Pro-teobacteria类群（变形菌类群）,占80%;细菌优势类群顺序为β-Proteobacteria类群（32.5%）、γ-Proteobacteria类群（25%）、α-Proteobacteria类群（15%）、ε-proteobacteria类群（7.5%）、Firmicutes类群（厚壁菌类群）（5%）.这一结果与近年来国内外有关港口微生物多样性的报道较为一致.用DNAStar中Clustalw程序从测序的40个克隆子中选出17个OTU进行系统发育分析,同样表明浮游细菌多样性较强.