Three-dimensional numerical simulation of obfique wave action on vertical walls

A three-dimensional numerical model based on the potential theory was developed to study the oblique wave action on vertical walls. A source term inside the domain was used to generate incident waves and outgoing waves were dissipated by sponge layers and transmitted by radiation boundaries. The finite difference method was used to solve the governing equations and boundary conditions in the regular transformed domain in σ-coordinate. Satisfactory agreements between the numerical predictions and experimental results of wave force were obtained. It is concluded that the maximum wave force acting on the vertical walls is induced by the obliquely incident waves rather than the normally incident waves.     

Elucidating the dynamics and mixing agents of a shallow fjord through age tracer modelling

The mixing agents and their role in the dynamics of a shallow fjord are elucidated through an Eulerian implementation of artificial tracers in a three-dimensional hydrodynamic model. The time scales of vertical mixing in this shallow estuary are short, and the artificial tracers are utilized in order to reveal information not detectable in the temperature or salinity fields. The fjord's response to external forcing is investigated through a series of model experiments in which we quantify vertical mixing, transport time scales of fresh water runoff and estuarine circulation in relation to external forcing.Using age tracers released at surface and bottom, we quantify the time scales of downward mixing of surface water and upward mixing of bottom water. Wind is shown to be the major agent for vertical mixing at nearly all depth levels in the fjord, whereas the tide or external sea level forcing is a minor agent and only occasionally more important just close to the bottom. The time scale of vertical mixing of surface water to the bottom or ventilation time scale of bottom water is estimated to be in the range 0.7 h to 9.0 days, with an average age of 2.7 days for the year 2004.The fjord receives fresh water from two streams entering the innermost part of the fjord, and the distribution and age of this water are studied using both ageing and conservative tracers. The salinity variations outside this fjord are large, and in contrast to the salinity, the artificial tracers provide a straight forward analysis of river water content. The ageing tracer is used to estimate transport time scales of river water (i.e. the time elapsed since the water left the river mouth). In May 2004, the typical age of river water leaving the fjord mouth is 5 days. As the major vertical mixing agent is wind, it controls the estuarine circulation and export of river water. When the wind stress is set to zero, the vertical mixing is reduced and the vertical salinity stratification is increased, and the river water can be effectively exported out of the fjord.We also analyse the river tracer fields and salinity field in relation to along estuary winds in order to detect signs of wind-induced straining of the along estuary density gradient. We find that events of down estuary winds are primarily associated with a reduced along estuary salinity gradient due to increased surface salinity in the innermost part of the fjord, and with an overall decrease in vertical stratification and river water content at the surface. Thus, our results show no apparent signs of wind-induced straining in this shallow fjord but instead they indicate increased levels of vertical mixing or upwelling during down estuary wind events.     

Temporal change of clustered distribution of planktonic ciliates in Toyama Bay in summers of 1989 and 1990

Temporal change of clustered distribution in vertical profiles of three nutritional groups of planktonic ciliates, e.g. heterotrophic naked ciliates, mixotrophic naked ciliates and heterotrophic loricated ciliates, was investigated by following a drifting buoy in Toyama Bay on the Japan Sea coast of central Japan in summers of 1989 and 1990. Clustered distribution, represented as the mode of population density in the vertical plane, occurred mainly in the oligotrophic upper layer (0–50 m depth) above the subsurface chlorophyll-a maximum layer. Its clustered degree was stronger when the mode of population density in the vertical plane was formed at shallower depth, while its longevity was shorter as mentioned above. Vertical distribution of ciliates during summer in Toyama Bay is characterized by ephemeral clustered distribution, or in other wards, by rapid alternations of appearance and disappearance of the clustered distribution.     

Tidal fluxes of nutrients and suspended sediments at the North Inlet–Winyah Bay National Estuarine Research Reserve

Beginning June of 1993 suites of 13 water samples have been collected at Oyster Landing, North Inlet (SC), every 20 days covering two consecutive tidal cycles at 2.07 h intervals. In order to ascertain whether this large (and still growing) water chemistry data set can be used to determine tidal fluxes of nutrients and sediments, we coupled measured concentrations to estimates of instantaneous tidal discharge based on a basin water storage curve and hindcast tides. The mean advective fluxes of all constituents, including salt, showed statistically significant exports. This result, however, is largely due to an ebb bias in the sampling protocol, which resulted in 52% of the samples being collected on ebb tide versus a theoretical percentage of 48%. When this bias was corrected by reducing the mean discharge (−610 l s⁻¹) to a value (−125 l s⁻¹) that produced a balance between the mean advective and dispersive salt fluxes, the advective fluxes of the other constituents were reduced to values that are not significantly different from zero. In addition to a statistically significant dispersive influx of salt, significant dispersive exports were found for DON, NH₄, DOP, PO₄ and DOC. All particulate constituents (PN, PP, ISS and OSS) yielded dispersive fluxes that were not significantly different from zero. Annual material budgets for the Oyster Landing basin based on the dispersive fluxes of all constituents (except salt) are generally similar in magnitude and direction to those measured by [Dame, R.F., Spurrier, J.D., Williams, T.M., Kjerfve, B., Zingmark, R.G., Wolaver, T.G., Chrzanowski, T.H., McKeller, H.N., Vernberg, F.J., 1991. Annual material processing by a salt marsh-estuarine basin in South Carolina, USA. Marine Ecology Progress Series 72, 153–166.] in the nearby and ecologically similar Bly Creek basin, indicating that the dispersive fluxes determined in this study are realistic. We offer suggestions for improving the reliability and usefulness of future Oyster Landing water quality data.     

湍流数值模拟中封闭模式应用的局限性

通过对琼州海峡的潮流场特征进行数值模拟，指出了选择不同的特征混合长度表达式对数值模拟结果的影响，表明了基于特征混合长度理论的流封闭模式在近海湍流数值模拟中应用的局限性。     

Microphytobenthos vertical migratory photoresponse as characterised by light-response curves of surface biomass

The migratory response of intertidal microphytobenthos to changes in irradiance was studied on undisturbed estuarine sediments. Two non-destructive optical techniques were used to trace variations in vivo of surface biomass: PAM fluorometry, for measuring the minimum fluorescence level (F_o); and spectral reflectance analysis, for quantifying the normalized difference vegetation index (NDVI). Following the formation of a dense biofilm at the surface, replicated sediment samples were simultaneously exposed to six different irradiance levels, ranging from 50 to 1500 μmol m⁻² s⁻¹, during a period of 120 min. The migratory photoresponse of the biofilms was characterised by constructing biomass vs. light curves (BLC), relating the accumulation of microalgal biomass after that period (estimated by F_o or NDVI) to the irradiance level incident on the surface. BLCs allow characterising the main features of the migratory photoresponse of intact biofilms. Typical BLC showed a clear biphasic pattern, with an increase in microalgal accumulation under irradiances below 100 μmol m⁻² s⁻¹, maximum values under 100–250 μmol m⁻² s⁻¹, and a gradual decrease of surface biomass under higher irradiances, indicating a strong photophobic downward migratory response. Similar BLC patterns were obtained when measuring F_o or NDVI. The construction of BLCs for biofilms from intertidal sites with distinctive sediment characteristics and diatom taxonomic composition allowed to detected significant differences in the migratory photoresponse. Biofilms from a muddy sediment exhibited considerably larger amplitude in the migratory photoresponse than the biofilms from a sandy mud site, especially under high irradiances. The photophobic migratory response to high light was found to vary among diatom species, particularly in the case of the biofilms from the muddy sediments.     

Vertical distribution of the macrobenthic community and its relationships to trace metals and natural sediment characteristics in the lower Douro estuary, Portugal

Vertical distribution (0–15 cm) of the macrobenthic community and its relationships to natural sediment characteristics and trace metal contents and bioavailability were studied at five locations in the lower Douro estuary, Portugal. An analysis of vertical metal distribution, for the interpretation of anthropogenic impact on the estuarine sediments, was also investigated. Sediment characterisation included organic matter, grain size, metals (Al, Fe, Cu, Pb, Cr, Ni, Cd, Zn and Mn), acid volatile sulphide (AVS) and simultaneously extracted metals (SEM). The macrobenthic community had low diversity (14 species), was dominated by small size opportunists and seemed to be controlled mainly by natural factors such as grain size distribution, Al and Fe contents and sediment depth. The vertically heterogeneous distribution of macrobenthic community appears to affect redox status of the sediments and consequently metal bioavailability. Despite anthropogenic contamination in terms of Zn, Cu, Pb, Cr and Ni having already been detected in the north bank, the analysis of vertical distribution was essential for the identification of current anthropogenic contamination in terms of Zn, Pb and Cd in the south bank.     

9012号热带气旋维持的卫星云图和垂直结构特征分析

本文根据卫星云图的演变和常规天气分析相结合，对9012号热带气旋登陆后维持水消的成因进行了分析。指出该热带气旋经久不消的重要原因为其西南侧对流云团和东北侧高空槽前对流云带与热带气旋云系相衔接在中低层东北气流引导下卷入，热带气旋内部的两条云带的维持，以及利有的环流条件。     

Biological Responses to Seasonally Varying Fluxes of Organic Matter to the Ocean Floor: A Review

Deep-sea benthic ecosystems are sustained largely by organic matter settling from the euphotic zone. These fluxes usually have a more or less well-defined seasonal component, often with two peaks, one in spring/early summer, the other later in the year. Long time-series datasets suggest that inter-annual variability in the intensity, timing and composition of flux maxima is normal. The settling material may form a deposit of “phytodetritus” on the deep-seafloor. These deposits, which are most common in temperate and high latitude regions, particularly the North Atlantic, evoke a response by the benthic biota. Much of our knowledge of these responses comes from a few time-series programmes, which suggest that the nature of the response varies in different oceanographic settings. In particular, there are contrasts between seasonal processes in oligotrophic, central oceanic areas and those along eutrophic continental margins. In the former, it is mainly “small organisms” (bacteria and protozoans) that respond to pulsed inputs. Initial responses are biochemical (e.g. secretion of bacterial exoenzymes) and any biomass increases are time lagged. Increased metabolic activity of small organisms probably leads to seasonal fluctuations in sediment community oxygen consumption, reported mainly in the North Pacific. Metazoan meiofauna are generally less responsive than protozoans (foraminifera), although seasonal increases in abundance and body size have been reported. Measurable population responses by macrofauna and megafauna are less common and confined largely to continental margins. In addition, seasonally synchronised reproduction and larval settlement occur in some larger animals, again mainly in continental margin settings. Although seasonal benthic responses to pulsed food inputs are apparently widespread on the ocean floor, they are not ubiquitous. Most deep-sea species are not seasonal breeders and there are probably large areas, particularly at abyssal depths, where biological process rates are fairly uniform over time. As with other aspects of deep-sea ecology, temporal processes cannot be encapsulated by a single paradigm. Further long time-series studies are needed to understand better the nature and extent of seasonality in deep-sea benthic ecosystems. This revised version was published online in August 2006 with corrections to the Cover Date.