Monitoring the Kuroshio Extension with Dynamically Constrained Synthesis of the Acoustic Tomography, Satellite Altimeter and in situ Data

A finite-difference quasigeostrophic (QG) model of an open ocean region has been employed to produce a dynamically constrained synthesis of acoustic tomography and satellite altimetry data with in situ observations. The assimilation algorithm is based upon the 4D variational data interpolation scheme controlled by the model's initial and boundary conditions. The data sets analyzed include direct and differential travel times measured at the array of five acoustic transceivers deployed by JAMSTEC in the region of the Kuroshio Extension in 1997, Topex/Poseidon altimetry, CTD soundings, and ADCP velocity profiles. The region monitored is located within the area 27.5°–36.5°N, 143°–155°. The results of assimilation show that mesoscale variability can be effectively reconstructed by five transceivers measuring direct and reciprocal travel times supported by relatively sparse in situ measurements. The misfits between model and data lie within the observational error bars for all the data types used in assimilation. We have compared the results of assimilation with the statistical inversion of travel time data and analyzed energy balances of the optimized model solution. Energy exchange between the depth-averaged and shear components of the observed currents reveals a weak decay of the barotropic mode at the rate of 0.2 ± 0.7⋅10⁻⁵ cm²/s³ due to topographic interaction. Mean currents in the region are unstable with an estimate of the available potential energy flux from the mean current to the eddies of 4.7 ± 2.3⋅10⁻⁵ cm²/s³. Kinetic energy transition has the same sign and is estimated as 2.8 ± 2.5⋅10⁻⁵ cm²/s³. Potential enstrophy is transferred to the mesoscale at a rate of 5.5 ± 2.7⋅10⁻¹⁸ s⁻³. These figures provide observational evidence of the properties of free geostrophic turbulence which were predicted by theory and observed in numerical experiments. This revised version was published online in July 2006 with corrections to the Cover Date.     

Spatio-temporal variability of small copepods (especially Oithona plumifera) in shallow nearshore waters off the south coast of South Africa

Although small copepods are one of the main dietary sources for many commercially important fish, their role in the pelagic trophic dynamics has traditionally been underestimated due to the methodology commonly used in plankton sampling. Temporal variation in abundance of adults and nauplii of small copepods (particularly Oithona plumifera) in nearshore waters on the south coast of South Africa was investigated fortnightly over 14 months at site (km) and location (100 m) scales. Sampling was within <500 m of the shore, where depth was ca. 10 m, using vertical hauls of an 80-μm mesh plankton net from 1 m above the seabed to the surface. Twenty-seven adult copepod taxa were recorded, but Oithona spp. was consistently the most abundant. Taxon richness was 7–19 on each sampling occasion. There was strong temporal variation (Oithona varied between 0 and 2300 m⁻³), but much of this was short-term variability (e.g. between consecutive sampling sessions), with no seasonality or other long-term discernable patterns. There were periods of consistently low numbers, but very high numbers often followed samples with low abundances. Nor was there spatial structure at the location scale, though numbers differed between sites. Despite considerable variability at the location scale within sites, Kenton consistently showed higher densities than High Rocks. Separate analyses, with Bonferroni adjustment, showed that this difference was significant on eight out of 21 occasions for Oithona, six for other pelagic copepods and three for nauplii. This suggests that hydrodynamics favour aggregation of plankton at Kenton. A high degree of short-term variability, with a tendency for aggregation of small zooplankton at certain sites has implications for both pelagic processes and food-web links between the benthic and pelagic environments.     

Abundance of the introduced seastar, Asterias amurensis, and spatial variability in soft sediment assemblages in SE Tasmania: Clear correlations but complex interpretation

The northern Pacific seastar, Asterias amurensis, was first collected in southeast Tasmania in 1986. Mistaken for the endemic asteroid Uniophora granifera, its true identity was not realised until 1992. It is now a conspicuous predator in soft sediment habitats in this region, and is considered a major threat to native assemblages and commercial species. We examined the structure of soft sediment assemblages at different spatial scales in southeast Tasmania, and correlated spatial variation in community composition with seastar abundances. We found that the structure of soft sediment assemblages is highly variable at a range of spatial scales from metres to tens of kilometres. Clear differences in the composition of assemblages and abundances of major taxa were detected between areas with and without seastars and between areas with low and high seastar densities. However, the nature of these patterns suggests that they are more likely due to differences in sediment characteristics than due to impacts of the seastar. Thus, spatial differences in soft sediment assemblages might have been erroneously attributed to seastars without detailed information on important physical factors such as sediment characteristics. A second survey, using larger sampling units (1 m²) but across a more limited spatial extent, targeted bivalves and heart urchins that were identified as important prey of the seastar in observations of feeding and in experimental studies. Large-scale patterns of abundance and size structure were consistent with seastar effects anticipated from small-scale experimental and feeding studies for some, but not all, species. While the field survey ultimately provided evidence about the presence or absence of seastar impacts at large-scales, the identification of key ecological variables in experimental and feeding studies proved crucial to both the design and interpretation of patterns observed in the large-scale surveys. Overall, this work highlighted the necessity to consider multiple lines of evidence rather than relying on a single ‘inferential’ test, in the absence of pre-impact data.     

Optimum Sample Size to Detect Perturbation Effects: The Importance of Statistical Power Analysis – A Critique

Abstract. The current article describes statistical power analysis as an efficient strategy for the estimation of the optimum sample size. The principle aim is constructively to criticise and enrich the results presented by Mouillot et al. (1999) , who estimate the optimum sample size for evaluating possible perturbations. The authors did not make any reference to statistical power analysis, even though their objective clearly went beyond a simple stock evaluation to assess management strategies in a particular marine ecosystem. Surprisingly, they proposed (a priori) an ANOVA design to test a hypothesis considering both space and temporal scales. However, the authors did not cover important topics related with power analysis and the precautionary principle, both used into environment impact assessment programmes for marine ecosystems. Based on their results and on statistical power analysis, it is demonstrated that the variability (dispersion statistics), a key factor they used to estimate the sample size, is less relevant than the magnitude of perturbation (effect size). Therefore, a greater effort must be devoted to estimate the effect size of a particular phenomenon rather than a desired variability.     

Surface circulation of the Levantine Basin: Comparison of model results with observations

The eastern Mediterranean (Levantine Basin) hydrography and circulation are investigated by comparing the results of a high-resolution primitive equation model with observations. After a 10-year integration, the model is able to reproduce the major water masses and the circulation patterns of the eastern Mediterranean. Comparisons with the POEM hydrographical observations show good agreement. The vertical distribution of the water masses matches that of the observations quite well in terms of monthly mean. The model surface circulation is in agreement with circulation schemes derived from recent observations. Some well-known mesoscale features of the upper thermocline circulation are also realistically reproduced. In agreement with satellite observations, the model shows that high-energy mesoscale eddies dominate the upper thermocline circulation in the southern and the central parts of the Levantine Basin. Most of the Atlantic Water follows the north African coast and forms a strong coastal jet near the Libyan coast rather than forming the Mid-Mediterranean Jet described by several authors. The sub-basin circulation shows a strong seasonal signal. A strong and stable current flows along the isobaths in winter, becoming weaker and with more meanders in summer. The mesoscale eddies throughout the whole basin are more energetic in summer than in winter.     

Seasonal dynamics in pelagic fish abundance in a Baltic Sea coastal area

The spring-spawning Baltic Sea herring spawn in coastal areas that also serve as nursery areas for the young fish during their first summer. In a bay known as a herring spawning and nursery area, the pelagic fish abundance was quantified using hydroacoustics every second week from late spring to autumn in 2000 and 2001. A dense system of survey transects allowed determination of the acoustic index (the nautical area scattering coefficient) for fish abundance with high precision. The variation, expressed as the geostatistical coefficient of variation, was on average 5% both years and ranged from 3–11% (2000) and 3–8% (2001). Through the hydroacoustic data intra-annual dynamics in acoustic fish abundance, densities and size composition could be followed, which showed similar trends in both years. In spring and early summer acoustic fish densities were low, followed by a drastic, 20-fold increase in late summer. Hydroacoustic data and biological samples suggest that the increase was caused mainly by the recruitment of young-of-the-year herring to the acoustically assessable pelagic fish community. This age class is commonly not well represented in catches when using traditional sampling gears such as gill nets and trawls, and hydroacoustics may help to improve quantitative estimates of small juvenile fish in order to increase the understanding of biological processes in coastal nursery areas.     

Seasonal Changes in Soluble Carbohydrates, Starch, and Energy Content in Mediterranean Seagrasses

Abstract. In all scagrass species investigated, rhizomes were the main storage organs for soluble carbohydrate reserves, and the highest levels were found in Cymodocea nodosa (U cria ) A scherson . Sucrose was the primary soluble carbohydrate identified in Posidonia oceanica (L.) D elile , and Zostera noltii H ornem . This disaccharide was dominant in Cymodocea nodosa roots, as well as in its rhizome in winter. Myo-inositol was the main cyclitol in Zostera noltii. In Cymodocea nodosa leaves 1-chiro-inositol was the main sugar component; it was also present to a lesser extent in the roots and rhizomes. The amounts of glucose and fructose were correlated with growth to a certain extent in all species. Higher amounts of starch were stored in the rhizomes of Posidonia oceanica and Zostera noltii. The energy content of Mediterranean scagrasses was significantly higher than in tropical species. No distinct seasonal trend in energy content could be observed.     

Seasonal Changes in Nitrogen, Free Amino Acids, and C/N Ratio in Mediterranean Seagrasses

Abstract. Seasonal changes in nitrogen, free amino acids, and carbon were investigated in the three Mediterranean seagrasses Posidonia oceanica, Cymodocea nodosa , and Zostera noltii. Leaves, rhizomes, roots, as well as dead plant material were analysed separately. Highest N-concentrations were obtained in the winter months, regardless of species or plant part. In contrast to the other two species, the N-content in Posidonia was higher in the rhizomes than in the leaves.
In the investigated species, marked differences in the free amino acid (FAA) composition were detected between species: Proline, lacking in Posidonia , was the main component in Cymodocea. In Posidonia , FAA decreased from 320umol g^-1 (dry wt) in leaf sheaths to 1.5 umol g^-1 (dry wt) in the leaf tips. The function of proline as a possible storage and/or stress metabolite is discussed.
High C/N values in dead P. oceanica and C. nodosa rhizomes as well as in P. oceanica wrack seem to be related to considerable resistance to decomposition. Low C/N ratios did not increase in detached C. nodosa and Z. noltii leaves, which began to decompose shortly after detachment from the plants.