Hydraulic and sedimentary controls on the availability and use of Atlantic salmon (Salmo salar) spawning habitat in the River Dee system, north-east Scotland

The hydraulic and sedimentary characteristics of the spawning habitat of Atlantic salmon (Salmo salar) in tributary and mainstem locations in a river system in north-east Scotland are described. Salmon used spawning sites with a relatively wide range in sediment characteristics, although measures of central tendency were all in the gravel (2–64 mm) size-class. The dominant factor differentiating the sediment characteristics of study sites was the level of fine sediment, which accounted for significant differences between tributary and mainstem samples. The ranges of depth and velocity in areas used for spawning by salmonids were found to be similar in all tributary study sites. However, due to the interdependence of depth and velocity, major differences were observed between tributary and mainstem study sites in that spawning in larger streams tended to be associated with deeper, faster flowing water. Spawning locations were shown to have similar Froude number, despite different sized streams and species of salmonid. Due to its dimensionless nature and significance in characterising flow hydraulics, the Froude number is proposed as a potentially useful variable for describing the habitat of aquatic organisms.     

The water level simulation for crane habitat optimization in Xianghai Nature Reserve

The probability of crane living in reedy wetlands can reach 100%, at the same time, the area of reed, the water level and adjacent water area are main factors which control the crane's habitat selection. We all know that all these factors are spatially heterogeneous. For the Xianghai wetland safety and to protect the Xianghai wetland habitat of crane, this paper has mainly identified a solution to these problems. The wetland information is extracted from the TM images, which reflect the whole wetland landscape and are very important for both quantitative analysis of remote sensing observation of the earth system and positioning analysis in GIS database that is automatically extracted from DEM. The DEM for Xianghai characteristics of topography is created. On the basis of the GRID SUBMODULE, applying the GIS spatial overlay analysis, the relationship between the water level and the reed area below the water level and the rating distribution maps of reed area above water level is established. When the water level reaches the altitude of 165 m, the reed area, 981.2 ha is maximum, i.e., the water level of 165 m is the optimal.     

Impact of habitat heterogeneity on plant community pattern in Gurbantunggut Desert

1IntroductionStudy on the interrelationship between vegetation patterns and their habitat heterogeneity is important to recover and rehabilitate the desert vegetation, stabilize the desert ecosystem and prevent desert expansion. Domestic and foreign researchers have carried out many studies on this topic (Archer etal., 2002; Bolling etal., 2000; Chen etal., 2003; Dasti etal., 1994; Gu etal., 2002, Li etal., 2001; Li etal., 2001; Liang etal., 2003), which have used and refined statistic tech…     

A Comparison of Public Lands and Farmlands for Grassland Bird Conservation

Midwestern states have invested extensively in grasslands for wildlife conservation, yet these public lands make up a minority of grassland habitat. How effective are public grasslands, relative to private lands, for conserving native songbird populations? I compare private and public lands in southern Minnesota using bird survey data from Conservation Reserve Program (CRP) fields and public lands and assessing fragmentation in a GIS. Bird abundance and diversity were greater on CRP lands. Vegetation composition, field isolation, and field size appear to explain differences in bird counts. Land cover data show that grassland habitat on public lands is scarce and widely scattered. The CRP provides more, and here better, habitat for grassland birds. Funding partly explains this disparity. Trends in farm set‐aside program rules and distribution, which can be vary greatly over time, will strongly influence the success or failure of biodiversity conservation in this region.     

Variation of stream temperature among mesoscale habitats within stream reaches: southern Appalachians

Stream mesoscale habitats have systematic topographic relationships to hyporheic flow patterns, which may create predictable temperature variation between mesoscale habitat types. We investigated whether systematic differences in temperature metrics occurred between mesoscale habitats within reaches of small streams tributary to the upper Little Tennessee River, southern Appalachians. Surface water temperature was recorded over three or four mid‐summer days in four mesoscale habitat types: riffle, main riffle, pool and alcove in 44 stream segments (sites). Temperature metrics were calculated for each mesoscale habitat relative to the mean value of the metric over the stream: Δ maximum temperature, Δ average maximum temperature and Δ maximum daily variation and also for each site: standard deviation of the maximum temperature and average diurnal variation (ADV). Sites were categorized as fully or partially forested. Pool tailouts had statistically significantly lower Δ maximum temperature and Δ average maximum temperature than riffle tailouts in partially forested sites, although differences were small. This was the opposite of what was expected in the presence of hyporheic exchange, indicating hyporheic exchange is not a dominant driver of mesoscale habitat temperatures at these sites. Temperature differences between mesoscale habitat units were small and unlikely to have ecological significance. We also evaluated relationships between stream temperature and riparian condition, watershed % impervious surfaces, watershed % non‐forested and elevation. ADV and standard deviation of the maximum temperature were significantly higher in partially forested sites, indicating that partially forested sites have greater temperature ranges and spatial variation of maximum temperatures. ADV decreased with elevation and increased with % impervious surfaces. Copyright © 2013 John Wiley & Sons, Ltd.     

Anthropogenic factors and habitat complexity influence biodiversity but wave exposure drives species turnover of a subtropical rocky inter‐tidal metacommunity

Coastal ecosystems are complex and species rich, but are vulnerable to degradation from a variety of anthropogenic activities. Nevertheless, information on inter‐tidal community composition in the Caribbean Basin and at other oceanic sites is lacking. Such information is essential to developing a more comprehensive understanding of rocky inter‐tidal systems and their responses to global change. The goals of this study were to determine the relative importance of environmental (wave power density, wave height), habitat (e.g. algal cover, slope, complexity of rock surfaces) and anthropogenic (distance to roads, population density) factors associated with the structure of local assemblages at multiple shore heights and the regional metacommunity of mobile invertebrates on oceanic rocky inter‐tidal habitats. Environmental characteristics associated with habitat complexity (algal cover, rock surface complexity) and human population density were most strongly associated with abundance and biodiversity of invertebrates. Species richness was positively correlated with surface complexity, but abundance was negatively correlated with both surface complexity and per cent algal cover. By contrast, abundance of invertebrates was positively correlated with human population density, and diversity was negatively correlated with human population density. Abundance of invertebrates was greatest in the mid inter‐tidal zone, whereas diversity was greatest in the lower inter‐tidal zone. Metacommunity structure was Gleasonian, but the gradient along which species turnover occurred was correlated with measures of wave exposure, rather than anthropogenic activity. Unlike in previous studies, mostly at mainland sites, human activity primarily altered dominance patterns of communities, while having relatively little effect on species richness or composition.     

Coralligenous habitat in the northern Adriatic Sea: an overview

The rocky outcrops irregularly scattered in the sandy‐muddy sea bed of the Northern Adriatic, formed by a base rock and a superimposed concretion of vegetal and animal organisms, are considered an infralittoral coralligenous habitat, according to the most recent definition. In the last four decades, research has mainly concentrated on their geology because of the question of the origin of the base rock – very similar to beachrock – which has only recently been attributed to sedimentary cementation induced by methane seeps. Studies on their macrobenthic assemblages have also been published recently, but true comparisons among them are difficult because they mostly refer only to a few selected phyla or to short‐term observations. Very few papers deal with the whole of the animal and plant communities, including all taxonomic groups and the most important environmental variables. On the basis of the literature data concerning several outcrops in the Gulf of Venice, we suggest that the Adriatic reefs differ slightly from the classic deeper coralligenous assemblages around the Mediterranean coast because they have smaller concretions of algae builders. We also suggest that the Northern Adriatic coralligenous reefs are younger than the other reefs occurring in the Mediterranean Sea.     

Coastal and estuarine habitat mapping, using LIDAR height and intensity and multi-spectral imagery

The airborne laser scanning LIDAR (LIght Detection And Ranging) provides high-resolution Digital Terrain Models (DTM) that have been applied recently to the characterization, quantification and monitoring of coastal environments. This study assesses the contribution of LIDAR altimetry and intensity data, topographically-derived features (slope and aspect), and multi-spectral imagery (three visible and a near-infrared band), to map coastal habitats in the Bidasoa estuary and its adjacent coastal area (Basque Country, northern Spain). The performance of high-resolution data sources was individually and jointly tested, with the maximum likelihood algorithm classifier in a rocky shore and a wetland zone; thus, including some of the most extended Cantabrian Sea littoral habitats, within the Bay of Biscay. The results show that reliability of coastal habitat classification was more enhanced with LIDAR-based DTM, compared with the other data sources: slope, aspect, intensity or near-infrared band. The addition of the DTM, to the three visible bands, produced gains of between 10% and 27% in the agreement measures, between the mapped and validation data (i.e. mean producer's and user's accuracy) for the two test sites. Raw LIDAR intensity images are only of limited value here, since they appeared heterogeneous and speckled. However, the enhanced Lee smoothing filter, applied to the LIDAR intensity, improved the overall accuracy measurements of the habitat classification, especially in the wetland zone; here, there were gains up to 7.9% in mean producer's and 11.6% in mean user's accuracy. This suggests that LIDAR can be useful for habitat mapping, when few data sources are available. The synergy between the LIDAR data, with multi-spectral bands, produced high accurate classifications (mean producer's accuracy: 92% for the 16 rocky habitats and 88% for the 11 wetland habitats). Fusion of the data enabled discrimination of intertidal communities, such as Corallina elongata, barnacles (Chthamalus spp.), and stands of Spartina alterniflora and Phragmites australis, which presented misclassification when conventional visible bands were used alone. All of these results were corroborated by the kappa coefficient of agreement. The high classification accuracy found here, selecting data sources, highlights the value of integrating LIDAR data with multi-spectral imagery for habitat mapping in the intertidal complex fringe.     

Use of SPOT 5 and IKONOS imagery for mapping biocenoses in a Tunisian Coastal Lagoon (Mediterranean Sea)

Mapping marine biocenoses is an efficient method for providing useful data for the management and conservation of Mediterranean lagoons. Fused images from two satellites, SPOT 5 and IKONOS, were tested as management tools for identifying specific ecosystems in the El Bibane lagoon, situated in southern Tunisia near the Libyan border. The objectives of this study were to provide a precise map of the entire El Bibane lagoon using fused images from SPOT 5 and to compare fused images from SPOT 5 and IKONOS over a test-area. After applying a supervised classification, pixels are automatically classified in four classes: low seagrass cover, high seagrass cover, superficial mobile sediments and deep mobile sediments. The maps of the lagoon revealed and confirmed an extremely wide distribution of seagrass meadows within the lagoon (essentially Cymodocea nodosa; 19 546 ha) and a large area of mobile sediments more or less parallel to the shore (3 697 ha). A direct comparison of overall accuracy between SPOT 5 over the entire area, SPOT 5 over the test-area and IKONOS over the test-area revealed that these tools provided accurate mapping of the lagoon environment (83.25%, 85.91% and 73.41% accuracy, respectively). The SPOT 5 images provided greater overall accuracy than the IKONOS image, but did not take into account the heterogeneous spatial structure of the seagrasses and sediments present in the lagoon environment. Although IKONOS imagery provided lower overall accuracy than SPOT 5, it proved a very useful tool for the mapping of heterogeneous structures as it enabled the patchiness of formations to be better taken into account. The use of SPOT 5 and IKONOS fused images appears to be very promising for completing the mapping of lagoons in other regions and countries of the Mediterranean Sea.     

Effect of crab size and habitat type on the locomotory activity of juvenile shore crabs, Carcinus maenas

Post-settlement processes are a major focus in the study of the dynamics of marine populations and communities. Post-settlement movement of juveniles is an important, but often ignored, process which affects local predator–prey and competitive interactions. We used benthic suction sampling and pitfall traps to examine density and locomotory activity of Carcinus maenas juveniles in different intertidal habitat types in the Rio Mira Estuary, Portugal, to better understand intra-specific interactions in a system where density-dependent processes are known to regulate population dynamics. As expected, significantly higher densities of juvenile shore crabs were found from bare mud compared to densely vegetated habitats. At the time of sampling, small and intermediate stages together outnumbered by far the larger juveniles. Conversely, larger crabs were much more frequent than smaller ones in traps. A locomotory index (LI), i.e. the ratio between crab catch in pitfall traps and their density within their moving range, is proposed as a measure of movement. LI analyses indicated that: (1) movement is an order of magnitude higher in large than small juveniles and much higher in sparse than dense vegetation cover; (2) activity of small juveniles is mostly crepuscular, regardless of vegetation cover; and (3) movement of large juveniles is very limited in dense Zostera patches, but very high in sparsely vegetated areas, during the day and night. These results suggest that small juveniles are relatively protected under dense vegetation cover due to lower mobility of larger crabs, and provide evidence of temporal segregation of activity windows between juvenile crabs of different sizes, which may be a key mechanism to reduce cannibalism and therefore increase the carrying capacity of nursery habitats.