基于微卫星(SSR)分子标记的中国对虾渤海湾增殖亲虾群体及回捕群体的遗传多样性分析

Eight microsatellite markers were used to analyze genetic diversity, level of inbreeding, and effective population size of spawner and recaptured populations of Chinese shrimp(Fenneropenaeus chinensis) during stock enhancement in the Bohai Bay in 2013. A total of 254 and 238 alleles were identified in the spawner and recaptured populations, respectively, and the numbers of alleles(N_a) were 8–63 and 6–60, respectively. The numbers of effective alleles(N_e) were 2.52–21.60 and 2.67–20.72, respectively. The polymorphism information content ranged from 0.529 to 0.952. The observed heterozygosity(H_o) values(0.638–0.910 and 0.712–0.927) were lower than the expected heterozygosity(H_e) values(0.603–0.954 and 0.625–0.952), which indicated that the two populations possessed a rich genetic diversity. In 16 tests(2 populations×8 loci), 13 tests deviated from the HardyWeinberg equilibrium. F_(is) values were positive at seven loci and the inbreeding coefficients(F) of the two populations estimated by trio ML were 13.234% and 11.603%, suggesting that there was a relatively high degree of inbreeding. A certain level of inbreeding depression had occurred in the Chinese shrimp population. F_(st) values ranged from 0 to 0.059, with a mean of 0.028, displaying a low level of genetic differentiation in the two populations. Effective population sizes(3 060.2 and 3 842.8) were higher than the minimum number suggested for retaining the evolutionary potential to adapt to new environmental conditions. For enhancement activity in 2014,the ideal number of captured shrimp spawners should have ranged from 7 686 to 19 214 to maintain genetic diversity and effective population size. Further strategies to adjust the balance of economic cost, fishing effort and ideal number of shrimp spawners to maintain a satisfactory effective population size for ensuring the sustainability of Chinese shrimp are proposed.     

大菱鲆体重和主要体型比率性状的遗传动态分析

The objective of this study was to estimate genetic parameters of body width(BW)to body length(BL)ratio(BW/BL)and of body weight traits(BWT)in turbot,and to elucidate the genetic mechanism of the two traits during ontogeny by dynamic genetic analysis.From 3 to 27 months,BW,BL and BWT of each communally stocked fish were measured every 3 months.The BW/BL ratio was measured at different sampling ages.A twotrait animal model was used for genetic evaluation of traits.The results showed that the heritability values of BW/BL ratio ranged from 0.2168 to 0.3148,corresponding to moderate heritability.The BWT heritability values ranged from 0.2702 to 0.3479 corresponding to moderate heritability.The heritability of BW/BL ratio was lower than that of BWT,except at 3 months of age.Genetic correlation between BW/BL ratio and BWT decreased throughout the measurement period.Genetic correlations were higher than the phenotypic correlations.The current results for estimating genetic parameters demonstrate that the BW/BL ratio could be used as a phenotypic marker of fast-growing turbot,and the BW/BL ratio and BWT could be improved simultaneously through selective breeding.     

中国近海外来囊藻(Colpomenia peregrina)种群遗传多样性研究

外来囊藻(Colpomeniaperegrina)是一种在潮间带分布广泛的褐藻,它能附着在牡蛎壳上进行跨海区扩散,因而是研究生物多样性变动和生物地理格局形成的良好模型。外来囊藻在中国沿海虽有分布,但关于其种群遗传多样性和分化研究的报道尚为空白。本研究采集了中国近海13个外来囊藻种群样本。通过扩增301条线粒体cox3序列,发现了26个单倍型;通过重建单倍型网络图和基于最大似然法与贝叶斯法重建系统进化树,发现外来囊藻种内遗传多样性较高, 13个种群划分为3个遗传世系,其中浙江南麂列岛的7个种群组成遗传世系A,辽宁和山东的样本则分化为遗传世系B和C。中国近海外来囊藻的这种种群遗传结构可能源于更新世末次盛冰期黄渤海、东海边缘海的环境变化和海平面的大幅下降。遗传世系A具有的较高单倍型多样性,其原因可能是南麂列岛独特的地理位置和潮间带环境的共同作用。     

基于Cyt b基因序列的南海北部蓝圆鲹群体遗传多样性研究

为了解南海北部蓝圆鲹(Decapterus maruadsi)的群体遗传变异特征,本研究利用线粒体DNA Cyt b基因部分序列对9个群体共203个个体进行群体遗传多样性和遗传结构分析.结果显示:在722 bp长的Cyt b部分序列中,共检测出52个多态位点,定义25个单倍型;群体的单倍型多样性(h)为0.577±0.036,核苷酸多样性(π)为0.001 55±0.001 12,整体遗传多样性呈中等偏低水平,其中雷州半岛和海南岛以东5个群体的遗传多样性水平明显高于以西的4个北部湾群体.单倍型系统发育树和网络图均未表现出与地理位置相对应的谱系结构,单倍型网络图呈以主体单倍型为中心的星状结构.群体间的Fst值为-0.077~0.018,且统计检验均不显著(p0.05).分子方差分析(AMOVA)表明,遗传变异全部来源于群体内个体间.Tajima's D值和Fu's Fs值均为显著负值,核苷酸不配对分布呈明显的单峰分布.南海北部蓝圆鲹群体约在29 000a前可能发生过扩张事件,导致遗传多样性呈现高h、低π模式;9个群体间的遗传分化并不显著,符合是一个随机交配种群的假设,但9个群体的遗传多样性水平却表现出明显的地理趋势,提示将南海北部蓝圆鲹作为单一种群进行渔业管理需持谨慎态度.     

洞庭湖水系五强溪水库光泽黄颡鱼(Pelteobagrus nitidus)遗传多样性的AFLP分析

为了了解沅水五强溪大坝阻隔对光泽黄颡鱼可能造成的遗传多样性影响,采用AFLP分子标记技术,对沅水五强溪水库库区和沅水下游两个光泽黄颡鱼野生群体进行了遗传多样性分析。9对选择性引物在两个光泽黄颡鱼群体中,共扩增出1243个位点,多态位点1091个,多态位点比率为87.77%。其中库区和沅水下游群体多态位点比率分别为85.41%、83.25%,观测等位基因数分别为1.854±0.592、1.803±0.622,有效等位基因数分别为1.597±0.381、1.574±0.377,Nei’s多样性指数分别为0.220±0.211、0.207±0.195,Shannon’s信息指数分别为0.330±0.305、0.302±0.338;两个群体内的平均遗传距离分别为0.124±0.072、0.119±0.057,群体间的平均遗传距离为0.127±0.100。两个群体的遗传参数比较不存在显著差异(P0.05)。聚类分析显示,UPGMA系统树没有依据群体而形成明显的两大分支。以上结果表明,五强溪水库库区和沅水下游两个光泽黄颡鱼群体的遗传多样性丰富,光泽黄颡鱼种群遗传结构对水库大坝阻隔的响应不明显。     

基于分区间泛化Kriging近似模型的船舶局部结构形状优化

为提高Kriging近似模型在船舶结构性能多维度响应预测方面的适用性,对常规Kriging近似模型进行分区间泛化改进:一是对设计样本点的各个维度(分量)进行划区,并在每一个分区间内采用最优拉丁超立方(OLhd)取样;二是引入比例系数w1组合高斯与指数型相关函数提高模型对数据的泛化能力,从而在每个划分的区间内建立泛化的Kriging近似模型。通过SCH测试函数,验证了构造的分区间泛化Kriging模型有效性。结合参数化建模和改进Kriging近似模型对某过渡肘板和舱口角隅边界进行形状优化,优化第一阶段由改进的近似模型通过多岛遗传算法得到全局初步的最优解,第二阶段在初步解的基础上缩小优化变量范围,由少量的FEM计算即可在小范围内搜寻到精确的最优设计变量。结果表明:分区间泛化Kriging近似模型在预测多维度响应时较常规Kriging模型预测精度更高;分阶段的形状优化流程在保证极小误差和缩小计算成本的情况下能够得到理想的应力分布和重量优化结果,有助于船舶结构的轻量化研究。     

Optimal design of two-dimensional wings in ground effect using multi-objective genetic algorithm

The shape optimization of the 2-dimensional wing in ground effect (WIG) has been performed by the integration of CFD (computational fluid dynamics) and MOGA (multi-objective genetic algorithm). Because of the trade-off between the aerodynamic forces and the height stability, it is difficult to satisfy the design requirements of efficiency and stability at the same time. In this study, the lift coefficient, the lift-drag ratio and the static height stability are chosen as the objective functions to obtain the optimal wing profiles of a WIG craft. An NACA0015 airfoil is used for the baseline model; the aerodynamic characteristics of the base model are compared with that of the optimal solutions. The profile of the airfoil is constructed by four Bezier curves with fourteen control points resulting in the eighteen coordinates, which are adopted as the design variables. The optimal solutions of the multi-objective optimization are not unique but a set of the non-dominated optima: the Pareto frontiers or a Pareto set. As the results of the multi-objective optimization, the forty Pareto optima, which include high-lift, high-efficiency, and more stable airfoils on the edge of the 3-dimensional objective space, are obtained at thirty evolutions of the generation.     

Gene flow and demographic history of the mangrove crab Neosarmatium meinerti: A case study from the western Indian Ocean

Most marine organisms are characterized by at least one planktonic phase during their life history, potentially allowing interconnection of populations separated by several hundred kilometers. For many years, the idea that marine species are genetically homogenous throughout their range of distribution, due to passive larval transport, has been a paradigm. Nowadays, a growing number of studies underline the existence of boundaries in the marine realm and highlight how larval dispersal is a complex process depending on biotic as well as abiotic factors. Marine fragmented habitats, such as atolls, mangroves and estuaries, are optimal systems for investigating the marine dispersion process under a metapopulation approach, since populations can be geographically defined a priori as opposed to those occupying open marine environments. Within this frame, the present paper investigates the population genetic structure and the demographic history of the mangrove crab Neosarmatium meinerti within the western Indian Ocean by partial sequences of the mitochondrial DNA cytochrome oxidase subunit I. A total of 167 specimens were sampled from six mangrove sites distributed along the East African coast, from Kenya to South Africa, also including a mangrove forest located on Mahé Island, Seychelles. A sharp genetic break between the mainland and the Seychelles is recorded, revealing the existence of two historically distinct groups that can be defined as independent evolutionary units. Gene flow along the East African coast appears to be high enough to form a single metapopulation, probably by means of stepping stone populations. Otherwise, this mainland metapopulation is currently under expansion through a gradual moving front from the subtropical toward the equatorial populations.     

卧龙湖湿地环境演化及其成因分析

以卧龙湖湿地的基本概况和有关监测资料为基础,对卧龙湖湿地的历史演变规律以及1975~2004年湖水位观测数据和调查资料进行分析,研究近29年来卧龙湖水位的变化趋势和水位下降的成因.运用水量平衡计算方法,得出气候、水文等自然因素和人为因素是导致近30年来入湖水量减少和水位下降的根本原因.     

安徽霍邱李老庄铁矿-菱镁矿床地质特征及矿床成因类型

霍邱铁矿田位于华北地台南缘,处于北淮阳山字型构造脊柱部位.李老庄铁矿-菱镁矿床置于霍邱铁矿田中部.该矿床主要产于新太古界霍邱群变质岩系中,矿体赋存于富镁碳酸盐中,矿石类型可以分为菱镁矿磁铁矿石和蛇纹石磁铁矿石,各占25%.成矿物质来源于变质岩系的多层、分散的含铁建造矿源层中.依据矿床地质特征,结合矿石同位素地质和测年结果,认为李老庄铁矿-菱镁矿铁矿床为一新太古代海相火山-沉积变质型矿床.