Investigating the molecular systematic relationships amongst selected Plesionika (Decapoda: Pandalidae) from the Northeast Atlantic and Mediterranean Sea

Despite the high number of species and ecological diversity of pandalid shrimps, there has been no previous attempt to resolve evolutionary relationships of several genera using molecular tools. Although mitochondrial DNA cytochrome oxidase I (COI) is widely used in barcoding studies to delimit species boundaries, additional insights into phylogenetic affinities can be obtained, especially when used in combination with data from additional genes. The knowledge of molecular diversity is essential to understand phylogenetic relationships and will help systematic clarifications. Based on partial fragments of the 16S and COI genes, we have focused specifically on addressing the systematic relationships of the economically and ecologically important shrimp genus Plesionika within a framework of five genera from within the Pandalidae. Our results showed that species within Plesionika are substantially divergent when compared with other genera, exhibiting the highest average nucleotide divergence, with 0.1123 and 0.0846 in COI and 16S genes, respectively. In addition, sequence divergence was found to vary greatly within the genus Plesionika (COI/16S): 0.0247/0.0016 between Plesionika antigai and Plesionika heterocarpus and 0.1616/0.098 between Plesionika heterocarpus and Plesionika edwardsii. We did not find amino acid sequence divergence between P. heterocarpus and P. antigai compared with P. heterocarpus and P. edwardsii (8.10%, K2P distance). Three species of Plesionika (P. antigai, P. heterocarpus and Plesionika scopifera) appear well separated from other Plesionika species in both maximum likelihood and Bayesian analyses. The present study confirms the utility of COI over 16S as a genetic marker to resolve relationships between different species of Plesionika from the Northeast Atlantic and Mediterranean Sea, in addition to species delimitation. The findings highlight the need to further review paraphyly within Plesionika in an attempt to recognize a concordance in the evolutionary history of Plesionika with major ecological and geological events.     

An exploration for deep-sea fish sounds off Vancouver Island from the NEPTUNE Canada ocean observing system

Our understanding of the significance of sound production to the ecology of deep-sea fish communities has improved little since anatomical surveys in the 1950s first suggested that sound production is widespread among slope-water fishes. The recent implementation of cabled ocean observatory networks around the world that include passive acoustic recording instruments provides scientists an opportunity to search for evidence of deep-sea fish sounds. We examined deep-sea acoustic recordings made at the NEPTUNE Canada Barkley Canyon Axis Pod (985 m) located off the west coast of Vancouver Island in the Northeast Pacific between June 2010 and May 2011 to determine the presence of fish sounds. A subset of over 300 5-min files was examined by selecting one day each month and analyzing one file for each hour over the 24 h day. Despite the frequent occurrence of marine mammal sounds, no examples of fish sounds were identified. However, we report examples of isolated unknown sounds that might be produced by fish, invertebrates, or more likely marine mammals. This finding is in direct contrast to recent smaller studies in the Atlantic where potential fish sounds appear to be more common. A review of the literature indicates 32 species found off British Columbia that potentially produce sound could occur in depths greater than 700 m but of these only Anoplopoma fimbria and Coryphaenoides spp. have been previously reported at the site. The lack of fish sounds observed here may be directly related to the low diversity and abundance of fishes present at the Barkley Canyon site. Other contributing factors include possible masking of low amplitude biological signals by self-generated noise from the platform instrumentation and ship noise. We suggest that examination of data both from noise-reduced ocean observatories around the world and from dedicated instrument surveys designed to search for deep-sea fish sounds to provide a larger-scale, more conclusive investigation into the role, or potential lack thereof, of sound production.     

Abundance,distribution, and feeding patterns of juvenile coho salmon (Oncorhynchus kisutch) in the Juan de Fuca Eddy

The Juan de Fuca Eddy is a seasonal, counter-clockwise gyre off the mouth of the Strait of Juan de Fuca between Washington, USA and British Columbia, Canada that may provide favorable feeding habitat for juvenile coho salmon (Oncorhynchus kisutch) during their early marine existence. In late September 2002, physical and biological sampling was conducted along two transects of the eddy region. Surface rope trawling was conducted to capture juvenile salmon and other nekton, along with bongo and neuston net tows to examine potential mesozooplanktonic salmon prey. Presence of the Juan de Fuca Eddy was confirmed with vertical water profiles. In addition, nutrient and chlorophyll a concentrations collected from 3-m depth were within the range observed in previous studies within the eddy region. In the mesozooplankton community, euphausiids, chaetognaths, and decapod megalopae were common. In the diet of juvenile coho salmon, euphausiids and decapod megalopae were dominant by percent number, and larval and juvenile fish were dominant by percent weight. Feeding intensity (percent body weight) based on stomach contents was variable, but not significantly different among stations. To compare the Juan de Fuca Eddy region with an upwelling area, we sampled along a transect off La Push (LP), Washington, USA which is south of the eddy. The eddy region was found to be less productive than the LP transect. Nutrients were lower, chlorophyll a concentrations were higher, and zooplankton abundance was generally higher along the LP transect than in the eddy region. In addition, more juvenile coho salmon were captured from the LP transect than the eddy region. Prey items in stomachs of salmon from the LP transect were heterogeneous compared to those from the eddy region. Feeding intensity along the LP transect was slightly lower and more variable than in the eddy region, and differences in feeding intensity among LP stations were significant. In addition, feeding intensities among stations nested within regions were significantly different.     

Oolitic shoal complexes characterization of the Lower Triassic Feixianguan Formation in the Yuanba Gas Field,Northeast Sichuan Basin,China

The Yuanba Gas Field is the second largest natural gas reservoir in the Sichuan Basin, southwest China. The vast majority of the natural gas reserve is from the Permian Changhsingian reef complexes and Lower Triassic Feixianguan oolitic shoal complexes. To better understand this reservoir system, this study characterizes geological and geophysical properties, spatial and temporal distribution of the oolitic shoal complexes and factors that control the oolitic shoals character for the Lower Triassic Feixianguan Formation in the Yuanba Gas Field. Facies analysis, well-seismic tie, well logs, seismic character, impedance inversion, and root mean square (RMS) seismic attributes distinguish two oolitic shoal complex facies – FA-A and FA-B that occur in the study area. FA-A, located in the middle of oolitic shoal complex, is composed of well-sorted ooids with rounded shape. This facies is interpreted to have been deposited in shallow water with relatively high energy. In contrast, FA-B is located in flanks of the oolitic shoal complex, and consists of poorly sorted grains with various shape (rounded, subrounded and subangular). The oolitic shoal complexes were mainly deposited along the platform margin. From the early Fei 2 Member period to the late Fei 2 Member period, the oolitic shoals complexes on the platform margin gradually migrated from the southwest to the northeast with an extent ranging from less than 100 km²–150 km² in the Yuanba Gas Field. The migration of oolitic shoals coincided with the development of a series of progradational clinoforms, suggesting that progradational clinoforms caused by sea-level fall maybe are the main reason that lead to the migration of oolitic shoals. Finally, this study provide an integrated method for the researchers to characterize oolitic shoal complexes by using well cores, logs, seismic reflections, impedance inversion, and seismic attribute in other basins of the world.     

基于粗糙集与犹豫层次分析的北极东北航道风险评估

运用风险分析理论和方法,以北极东北航道6个关键海峡为研究目标,构建东北航道自然环境风险评价指标体系;针对全球气候变暖以及海冰融化背景下北极东北航道航行安全问题,引入犹豫层次分析方法确定指标主观权重、采用粗糙集思想来确定客观权重,集成得到组合权重。基于所建风险分析模型,对其中3个关键海峡的自然环境风险进行了量化评估和时空特征分析,同时计算了2013年8月份6个关键海峡的风险度,模拟了一条最优通航线路并与同时期永盛号轮船的实际航行线路进行了比对。研究表明:(1)2000-2014年东北航道3个关键海峡自然环境风险均呈现减小趋势,红军海峡自然环境风险减小趋势最大;(2)对比3个海峡海峡自然环境风险度,德朗海峡最低,维利基茨基海峡次之,二者均适合通航;红军海峡风险度最高,且不适宜通航;(3)模型模拟路线与实际航线较吻合,对实时航行路线的选择有参考意义。     

气候变化对东北大西洋渔获物组成、多样性和营养级的影响

东北大西洋是世界上重要的捕捞海域,气候变化对该海域捕捞产生了重要的影响。本文基于联合国粮农组织所提供的1982−2016年东北大西洋渔获产量数据,对该海域渔获物组成、多样性、平均营养级及主成分变化特征进行时间序列上的分析,并结合东北大西洋海域气候、环境因子,应用广义可加模型探究渔获物组成与气候变化之间的关系。结果显示：渔获物多样性的变化总体上呈下降趋势,2002−2010年间处于较低水平;平均营养级在2002年之前呈平缓下降的趋势,2002年之后开始波动上升,相关性分析表明这两个指标与海域环境因子的变化较为相关。对渔获物组成进行主成分分析显示,第一主成份变化的方差解释率达到35.3%,且与海域气候、环境因素有较高的相关性,第一主成分变化能够较好地表征气候影响下渔获物组成变化的情况。广义可加模型分析结果显示,渔获物组成变化的影响因素按解释率由高到低分别为：海表温度、海平面高度、盐度、海冰和北大西洋涛动指数。该研究有助于认识气候变化对海洋渔业资源及其结构组成的影响。     

Wind-driven interannual variability over the northeast Pacific Ocean

Interannual variability of the sea surface height (SSH) over the northeast Pacific Ocean is hindcast with a reduced-gravity, quasi-geostrophic model that includes linear damping. The model is forced with monthly Ekman pumping fields derived from the NCEP reanalysis wind stresses. The numerical solution is compared with SSH observations derived from satellite altimeter data and gridded at a lateral resolution of 1 degree. Provided that the reduced gravity parameter is chosen appropriately, the results demonstrate that the model has significant hindcast skill over interior regions of the basin, away from continental boundaries. A damping time scale of 2 to 3 years is close to optimal, although the hindcast skill is not strongly dependent on this parameter.A simplification of the quasi-geostrophic model is considered in which Rossby waves are eliminated, yielding a Markov model driven by local Ekman pumping. The results approximately reproduce the hindcast skill of the more complete quasi-geostrophic model and indicate that the interannual SSH variability is dominated by the local response to wind forcing. There is a close correspondence the two leading empirical orthogonal modes of the local model and those of the observed SSH anomalies. The latter account for over half of the variance of the interannual signal over the region.