Physical characterisation and a biologically focused classification of “seamounts” in the New Zealand region

The physical, biological, and oceano‐graphic characteristics of seamounts of the New Zealand region of the South Pacific Ocean are poorly known. The aim of this study was to present a synopsis of the physical characteristics of seamounts within the region, and to present a preliminary classification using biologically meaningful variables. Data for up to 16 environmental variables were collated and used to describe the distribution and characteristics of the c. 800 known seamounts in the New Zealand region. Seamounts span a wide range of sizes, depths, elevation, geological associations and origins, and occur over the latitudinal range of the region, lying in different water masses of varying productivity, and both near shore and off shore. As such, it was difficult to generally describe New Zealand seamounts, as there is no “typical” feature. Thirteen environmental variables were included in a multivariate cluster analysis to identify 12 seamount similarity groupings, for a subset of over half the known seamounts. The groupings generally displayed an appreciable geographic distribution throughout the region, and were largely characterised by a combination of four variables (depth at peak, depth at base, elevation, and distance from continental shelf). In the future, the findings of the present study can be tested to determine the validity and usefulness of the approach for directing future biodiversity research and informing management of seamount habitat.     

The genus Pseudo-nitzschia (Bacillariophyceae) in New Zealand: analysis of the last decade's monitoring data

The diatom genus Pseudo-nitzschia blooms throughout New Zealand's coastal waters. More than a decade of monitoring data were analysed in this study and seasonality was a significant factor in the appearance of Pseudo-nitzschia blooms. Austral spring and summer were the main bloom periods, although there were regional differences. Between January 2000 and August 2011, 8.4% of 29,000 seawater samples analysed for Pseudo-nitzschia exceeded the voluntary trigger level for biotoxin testing (10×10⁴ cells l^?1), and these were analysed by fluorescent in situ hybridisation (FISH) assays. Pseudo-nitzschia fraudulenta and P. pseudodelicatissima (low domoic acid [DA] producers) were the dominant bloom formers throughout New Zealand (each contributing 25%) followed by the highly toxic P. australis (10%). Shellfish flesh testing for DA was triggered on 8477 occasions between 2000 and 2011, but no samples exceeded the regulatory limit (20 mg/kg); the maximum concentration was 13 mg/kg (Marlborough Sounds, mid-winter 2010).     

Mussel reefs on soft sediments: a severely reduced but important habitat for macroinvertebrates and fishes in New Zealand

Green-lipped mussels (Perna canaliculus) formed extensive reefs on soft sediments in sheltered embayments around northern New Zealand until overfishing and/or increased sediment input caused their virtual disappearance by 1980. To determine the role of mussel reefs as habitat for other animals, we located remnant soft-sediment reefs in five locations and compared the density, biomass, productivity and composition of mobile macroinvertebrate communities, and the density of small fishes associated with mussels, with fauna in the surrounding soft sediments. The mussel reefs had a distinct assemblage of macroinvertebrates, which had 3.5 times the density, 3.4 times the biomass and 3.5 times the productivity of surrounding areas. The density of small fishes was 13.7 times higher than in surrounding areas. These results show that soft-sediment mussel reefs support an abundant and productive fauna, highlighting the probable large loss of productivity associated with the historical decline in mussel habitat and the consequent desirability of restoration efforts.     

Relationships between molecular bacterial diversity and chemistry of groundwater in the Wairarapa Valley,New Zealand

Groundwater plays an important role in New Zealand water supplies and hence monitoring activities are conducted regularly. Most monitoring programmes aim to evaluate groundwater chemistry and almost completely overlook the microbial component in this ecosystem. In our present study, the bacterial community structure of groundwater in the Wairarapa Valley was examined using the terminal restriction fragment length polymorphism (T-RFLP), and relationships between bacterial community structure and groundwater chemistry, aquifer confinement and groundwater usage were explored. In addition, the results from this study were compared with a previous T-RFLP survey of the same area in an attempt to detect changes in bacterial community structure over time. The data obtained suggested that bacterial community structure was related to groundwater chemistry, especially to redox conditions. Species composition showed minimal variation over time if groundwater chemistry remained unchanged. These findings reflect the potential of using bacterial communities as biological indicators to evaluate the health of groundwater ecosystems. We suggest that it is important to include this type of broad bacterial diversity assessment criteria into regular groundwater monitoring activities.     

Wind-driven upwelling and surface chlorophyll blooms in Greater Cook Strait

We present the results of a combined observational and numerical study to investigate cool plumes of nutrient-rich upwelled water that emanate near the Kahurangi Shoals and extend into Greater Cook Strait. Surface temperature and chlorophyll are mapped using satellite observations to produce surface climatologies, to validate a numerical simulation and to show the utility of using spatial temperature differences as a measure of upwelling. We find upwelling near the Kahurangi Shoals is strongly wind-driven in the weather band. Upwelling occurs at all times of the year, but its surface signature is only visible in summer months. The upwelled nutrient-rich water supports increased primary production compared to surrounding waters, particularly in summer when the water column is more stratified and surrounding surface waters are presumably nutrient depleted.     

Predicting suitability of cockle Austrovenus stutchburyi restoration sites using hydrodynamic models of larval dispersal

An important aspect of shellfish restoration projects is to evaluate whether potential sites are likely to be recolonised naturally once disturbances are removed and habitats are restored. Similarly, if active translocation or reseeding of juveniles or adults is undertaken, it is important to understand whether these introduced populations will be self‐maintaining in future, and whether any seed they produce are likely to be retained within the restored area. We used a combined hydrodynamic and particle tracking model to predict larval dispersion patterns for the common cockle Austrovenus stutchburyi under different hydrodynamic scenarios for seven release locations in Whangarei Harbour, New Zealand. Our results implied that sites varied substantially in their potential for self‐seeding and for exporting seed to other locations. For sites with more restricted dispersal, the model predicted that most larvae originating at these sites would settle inside the release region (68–94% for passive particle simulations), whereas relatively few larvae originating from the other release sites settled at these sites. In contrast, model larvae released from sites exhibiting high connectivity dispersed to all sub‐regions in the harbour, and export outside of the model region was high. Forthcoming field validation of these model predictions will result in better integration of hydrodynamic connectivity in whole estuary restoration programs.     

Cement Deep Soil Mixing (CDSM) for Solidification of Soft Estuarine Sediments

A preliminary study was conducted to determine the potential for cement deep soil mixing (CDSM) technology as a method for in-situ solidification of contaminated river and estuarine sediments. The study was conducted in Newark Bay, near the mouth of the Passaic River, New Jersey. The primary objective of the study was to evaluate the viability of CDSM for the in-situ S/S with a focus on: 1) determining the correct mix of the cement slurry, which provides rapid stabilization of the sediment matrix, 2) potential resuspension of solids during CSDM operations, 3) the effects of high organic content on the solidification process, and 4) the feasibility of using conventional dredging/extraction methods once the sediments have been stabilized and allowed to cure. The results of the study show CDSM slurry mixtures, as low as 7% in cement content, result in significant solidification and strength gain of in-situ sediments under ambient conditions. In sediments with very high organic contents (> 20%), the slurry mix would need to be adjusted to account for retardation effects of organics on cement hydration. Sediment resuspension during application was shown to be minimal at a distance of as little as 75 feet from the mixing head. Strength gains were considerable, effectively consolidating the sediment particles in a secure matrix, but not so high as to preclude extraction of solidified sediments with conventional dredging equipment. Dredged solidified sediment exhibited characteristics of a stiff glacial clay, and as such was easier to handle and transport than untreated dredged sediments. This technique has high potential to be used as an interim remedial measure prior to either extraction and decontamination/disposal or proper capping.     

Intertidal sand‐dwelling Peracarid fauna of Stewart Island

Abstract

The distributions of infaunal Peracarida (Crustacea) and their correlation with sediment type, tidal height, and degree of exposure were studied in winter (June) at five beaches on Stewart Island, New Zealand. The beaches were selected lo cover a range of exposures to wind and wave action and substrate sorting. Substrate and infauna samples were taken at four tidal levels from each, with a 0.0625 m² quadrat.

Sieve separation and statistical analysis of the substrate samples indicated predominantly sand‐sized particles from all beaches, with median diameters in the range +1.52 to +2.92 ? (phi) units. Substrates were well sorted throughout the size range: ? quartile deviation ranged from 0.26 to 0.71, skewness from —0.18 to +0.07 ?.

Peracarid fauna was generally abundant, with a maximum of 29 136 per m²sampled in a more sheltered beach. Cumacea was the most abundant group, followed by Amphipoda, Isopoda, and Tanaidacea; dominance followed a similar sequence, being 78%, 19%, 2% and 1% respectively. Frequency of occurrence at the 19 stations was headed by Amphipoda (100%), with Isopoda 53%, Cumacea 32% and Tanaidacea 11%.     

Removal of intertidal algae by herbivores in experimental frames and on shores near Auckland

When grazing animals are excluded from any intertidal area algae grow unchecked. In screened frames on the shore where predation experiments are in progress such growth is undesirable. A number of shore herbivores were tested for their ability to remove such algal growth and prevent its reformation without interfering with the main experiments. Only the browsing species Lunella smaragda and Melagraphia aethiops were capable of removing large algal growths, and these species were acceptable food for some of the predatory species. The complex inter‐relationship between grazing species and shore zonation at several places near Auckland is discussed.     

Genetic variation and population structure in the New Zealand snapper

Fifteen proteins encoded by 23 gene loci were electrophoretically surveyed in two samples of snapper Chrysophrys auratus (Forster) from Wellington Harbour and the Hauraki Gulf. Between 17% and 26% of the loci examined were found to be polymorphic and the proportion of heterozygous loci per individual was 7.9% to 8.4%. Using Rogers’ genetic distance coefficient an overall similarity of 0.98 was calculated between the two samples.

Three polymorphic loci Est‐4, Gpi‐1, and Idh were examined in an additional 10 samples from around New Zealand. Two genetically distinct stocks were apparent: one along the west coast, the other along the east coast of the North Island. There was an indication of stock mixing at Ninety Mile Beach and in the Bay of Plenty and East Cape. The distribution of alleles at the Est‐4 locus revealed a third stock in Hawke Bay that is genetically more similar to the west coast than the east coast stock. Hydrological conditions in Hawke Bay are more similar to those of the west coast than to those of the north east coast of the North Island. Thus it is possible that Est‐4 alleles are selectively maintained in response to an environmental factor.