A comprehensive but efficient framework of proposing and validating feature parameters from airborne LiDAR data for tree species classification

Tree species information is crucial for digital forestry, and efficient techniques for classifying tree species are extensively demanded. To this end, airborne light detection and ranging (LiDAR) has been introduced. However, the literature review suggests that most of the previous airborne LiDAR-based studies were only based on limited kinds of tree signatures. To address this gap, this study proposed developing a novel modular framework for LiDAR-based tree species classification, by deriving feature parameters in a systematic way. Specifically, feature parameters of point-distribution (PD), laser pulse intensity (IN), crown-internal (CI) and tree-external (TE) structures were proposed and derived. With a support-vector-machine (SVM) classifier used, the classifications were conducted in a leave-one-out-for-cross-validation (LOOCV) mode. Based on the samples of four typical boreal tree species, i.e., Picea abies, Pinus sylvestris, Populus tremula and Quercus robur, tests showed that the accuracies of the classifications based on the acquired PD-, IN-, CI- and TE-categorized feature parameters as well as the integration of their individual optimal parameters are 65.00%, 80.00%, 82.50%, 85.00% and 92.50%, respectively. These results indicate that the procedures proposed in this study can be used as a comprehensive but efficient framework of proposing and validating feature parameters from airborne LiDAR data for tree species classification.     

Taxonomic distinctness in the diet of two sympatric marine turtle species

Marine turtles are considered keystone consumers in tropical coastal ecosystems and their decline through overexploitation has been implicated in the deterioration of reefs and seagrass pastures in the Caribbean. In the present study, we analysed stomach contents of green (Chelonia mydas) and hawksbill turtles (Eretmochelys imbricata) harvested in the legal turtle fishery of the Turks and Caicos Islands (Caribbean) during 2008–2010. Small juveniles to adult‐sized turtles were sampled. Together with data from habitat surveys, we assessed diet composition and the taxonomic distinctness (and other species diversity measures) in the diets of these sympatric marine turtle species. The diet of green turtles (n = 92) consisted of a total of 47 taxa: including three species of seagrass (present in 99% of individuals), 29 species of algae and eight sponge species. Hawksbill turtles (n = 45) consumed 73 taxa and were largely spongivorous (16 species; sponges present in 100% of individuals) but also foraged on 50 species of algae (present in 73% of individuals) and three species of seagrass. Plastics were found in trace amounts in 4% of green turtle and 9% of hawksbill turtle stomach samples. We expected to find changes in diet that might reflect ontogenetic shifts from small (oceanic‐pelagic) turtles to larger (coastal‐benthic) turtles. Dietary composition (abundance and biomass), however, did not change significantly with turtle size, although average taxonomic distinctness was lower in larger green turtles. There was little overlap in prey between the two turtle species, suggesting niche separation. Taxonomic distinctness routines indicated that green turtles had the most selective diet, whereas hawksbill turtles were less selective than expected when compared with the relative frequency and biomass of diet items. We discuss these findings in relation to the likely important trophic roles that these sympatric turtle species play in reef and seagrass habitats.     

台湾海峡游泳动物群落的空间结构及其季节变化

The Taiwan Strait is a transition zone between the East China Sea and the South China Sea with unique hydrology and a geographical environment that creates special marine community features.To analyze the spatial structure and seasonal changes of the nekton assemblages in the Taiwan Strait,seasonal experimental trawl surveys were conducted during 2006–2007.The results showed that there were two assemblages in the area with different sets of species,and the average similarity within each group varies between 39.38% and 74.20%.By using multivariate statistical analysis and analyzing the distribution of dominant species,we found that the structures of the assemblages had obvious seasonal variation.The middle region from the Putian transect to the Xiamen transect could be considered a mixing area for the two assemblages.The analysis of the relationship between species assemblages and environmental factors indicated that temperature was the most important factor affecting the community structure in cold seasons,and 22.5°C and 17°C could be considered dividing lines for spring and winter,respectively.In warm seasons,the most important factor was water depth,but the relationship with depth was not as significant,with a correlation between 0.264 and 0.399.The seasonal changes of nekton assemblages basically reflected the dynamic currents in the Taiwan Strait.The south coastal assemblage extended to nearly the entire area of the Taiwan Strait along with a strong and intense warm current that shrinks in spring and winter when the southward intrusion of the cold Zhejiang-Fujian coastal current becomes stronger.The impact of shortterm and long-term environmental changes,such as extreme weather,global warming and human activity on nekton assemblages,had been recognized but need further research.Our study on nekton assemblages could be used as a baseline for measuring future changes.     

东海春季赤潮过程中优势种的演替:生物-物理耦合数值模拟

In the East China Sea(ECS), the succession of causative species responsible for blooms is a recurrent phenomenon during the spring, which changes from diatoms to dinoflagellates. Observations from space and in situ cruises captured this pattern of succession during spring of 2005. In this study, we coupled two biological models, which were developed previously for Skeletonema costatum and Prorocentrum donghaiense,into a circulation model tailored for the ECS. The coupled biophysical model was used to hindcast the blooms and to test the hypothesis proposed in earlier studies that phosphate(PO4 3–) is the first-order decider of the succession. The coupled model successfully reproduced the hydrodynamics(as described in a companion paper by Sun et al.(1), the spatiotemporal distribution of the chlorophyll a(Chl a) concentration, and the species succession reasonably well. By analyzing the effects of different factors on the surface Chl a distribution, we confirmed that the offshore boundaries of the blooms were confined by PO4 3–. In addition, we suggest that surface wind fields may modulate the horizontal distribution of blooms. Thus, during the dispersal of blooms, surface winds coupled with PO4 3– may control the succession of blooms in the ECS. The proposed coupled model provides a benchmark to facilitate future improvements by including more size classes for organisms, multiple nutrient schemes, and additional processes.     

Balanced harvesting: The institutional incompatibilities

Balanced harvesting is the name of a newly proposed approach to fishing which promises the extraction of high and sustainable fisheries yields while maintaining the structure of the ecosystem from which those yields could be obtained. This is to be achieved through exposing all components of ecosystems (from zooplankton to top predators, including seals, sea birds and marine mammals) to a fishing mortality proportional to their size-specific productivity. This study briefly analyses the incompatibility between balanced harvesting (and its implications) and the stated missions of two major organizations, FAO (which stresses the need of selective fishing in its Code of Conduct for Sustainable Fisheries) and IUCN (which maintains the Red List of Threatened Species), but which have issued reports or organized conferences promoting balanced harvesting. The study also demonstrates the incompatibility of balanced harvesting with the recently reformed Common Fisheries Policy of the European Union. While balanced harvesting appears partly compatible with declared fisheries policies of a few countries, e.g. with regard to whaling, sealing, and indiscriminate biomass fishing, it is not only incompatible with the basic tenets of fisheries science, but also with the vision, gradually emerging globally, that marine organisms such as marine mammals, sea turtles, sea-birds and other fauna have an intrinsic value and right to life that should not be undermined by more of the indiscriminate fishing which currently shapes much of our interactions with the oceans.     

The MSY concept in a multi-objective fisheries environment – Lessons from the North Sea

One of the most important goals in current fisheries management is to maintain or restore stocks above levels that can produce the maximum sustainable yield (MSY). However, it may not be feasible to achieve MSY simultaneously for multiple species because of trade-offs that result from interactions between species, mixed fisheries and the multiple objectives of stakeholders. The premise in this study is that MSY is a concept that needs adaptation, not wholesale replacement. The approach chosen to identify trade-offs and stakeholder preferences involved a process of consulting and discussing options with stakeholders as well as scenario modelling with bio-economic and multi-species models. It is difficult to intuitively anticipate the consequences of complex trade-offs and it is also complicated to address them from a political point of view. However, scenario modelling showed that the current approach of treating each stock separately and ignoring trade-offs may result in unacceptable ecosystem, economic or social effects in North Sea fisheries. Setting F_MSY as a management target without any flexibility for compromises may lead to disappointment for some of the stakeholders. To treat F_MSY no longer as a point estimate but rather as a “Pretty Good Yield” within sustainable ranges was seen as a promising way forward to avoid unacceptable outcomes when trying to fish all stocks simultaneously at F_MSY. This study gives insights on how inclusive governance can help to reach consensus in difficult political processes, and how science can be used to make informed decisions inside a multi-dimensional trade-off space.     

南麂列岛火焜岙潮间带底栖纤毛虫物种多样性和群落时空分布

纤毛虫是潮间带沉积物中多样性高且丰度占优势的类群,其群落结构可反映环境状态。于2013年11月(秋季)、2014年2月(冬季)、5月(春季)和8月(夏季)开展了南麂列岛火焜岙砂质潮间带沉积物中纤毛虫物种多样性和群落结构的时空分布研究。结果表明,该生境中底栖纤毛虫物种丰富,共检获148种纤毛虫,涉及19目70余属;纤毛虫的丰度和物种组成呈现显著的季节差异和垂直分层差异。其中,丰度占优势的纤毛虫按食性依次为菌食类群、肉食类群和藻食类群;已非典型的砂隙纤毛虫区系,而是呈现出某些有机质丰富的泥沙质沉积物中的纤毛虫群落的特点,这可能是该生境受人类活动影响的后续效应。但纤毛虫物种多样性较高,这表明尽管存在人类干扰的长期效应,潮间带周边环境良好,对周边居民及设施的动迁等多样性保护措施可能已经产生了向好的结果。     

Biting midges of the extinct genus Protoculicoides Boesel from Lower Cretaceous amber of San Just,Spain and new synonymy in recently described fossil genera (Diptera: Ceratopogonidae)

We describe two new species of extinct biting midges in the fossil genus Protoculicoides: Protoculicoides hispanicus Szadziewski and Arillo, sp. nov. and Protoculicodes sanjusti Szadziewski and Arillo, sp. nov., from Albian (101–113 Ma) amber of San Just, Spain. Atriculicoides Remm, 1976 is recognized as a new junior synonym of Protoculicoides Boesel, 1937 (NEW SYNONYM). Devalquia Choufani et al., 2013 is regarded here as a new junior synonym of the extant genus Culicoides Latreille, 1809 (NEW SYNONYM). Metahelea roggeroi Choufani et al., 2013 from Upper Cretaceous French amber, is excluded from the tribe Heteromyiini and placed in the extant genus Stilobezzia Kieffer, 1911, tribe Ceratopogonini: Stilobezzia roggeroi (Choufani et al., 2013), comb. nov. The extinct tribe Atriculicoidini Szadziewski, 1996 is regarded as a new subfamily, Atriculicoidinae, stat. nov., that includes the fossil genus Protoculicoides, with 13 species reported from Albian, Turonian, Cenomanian, Coniacian, Santonian and Campanian ambers (78–113 Ma). Protoculicoides skalskii Szadziewski & Arillo, 1998 from Lower Cretaceous amber of Álava, Spain, Protoculicoides succineus Szadziewski, 1966 from Lower Cretaceous Lebanese amber and Protoculicoides burmiticus Szadziewski & Poinar, 2005 from Upper Cretaceous Burmese amber are transferred to the extinct genus Archiculicoides Szadziewski, 1996, comb. nov. Protoculicoides krzeminskii Choufani et al., 2014 from Lower Cretaceous Lebanese amber is transferred to the extinct genus Archiaustroconops Szadziewski, 1996, comb. nov. The Cretaceous subfamily Atriculicoidinae forms an unresolved trichotomy with the extant subfamilies Forcipomyiinae and Dasyheleinae, both of which date to the Eocene. The fossil record indicates that wings with macrotrichia in biting midges evolved during the mid-Cretaceous greenhouse climate. We suggest that this was an evolutionary adaptation to new atmospheric conditions with higher levels of CO₂ in order for the antennal Johnston's organs of males to receive the vibrational sex signals produced by females during flight.     

Ptismidae fam. nov. (Coleoptera,Staphyliniformia) from the Lower Cretaceous Lebanese amber

Ptisma zasukhae gen et sp. nov. is described from the Lower Cretaceous Lebanese amber and attributed to a new family Ptismidae fam. nov. with unclear position within the infraorder Staphylinoformia, hypothetically in the superfamily Staphylinoidea. This species is characterized by the rather small body size (0.59 mm) and structural similarities with different staphylinoid groups. The particular development of the legs of the new taxa shows some similarities with those of small and medium-sized jumping beetles from the superfamilies Scirtoidea, Buprestoidea, Tenebrionoidea, Chrysomeloidea and Curculionoidea. However, jumping beetles of these groups have strong femora and tibiae with large spurs and thick apical setae only on the posterior legs while P. zasukhae sp. nov. demonstrates such features on both mid and posterior legs. Another particularity of P. zasukhae sp. nov. is the unusual large femoral plate of metacoxae extending behind the suture between ventrites 2 and 3. Strong development of these structures are rare among Coleoptera and occurs in different taxonomic groups without close relationship. The studies were carried out with the usage of usual conventional light microscopy and confocal laser scanning microscopy.     

The first fossil Megalopsidiinae (Coleoptera: Staphylinidae) from Upper Cretaceous Burmese amber and its potential for understanding basal relationships of rove beetles

The first definitive fossil of the peculiar monotypic rove beetle subfamily Megalopsidiinae is described as a new species Megalopinus extinctus sp. n. It represents a stem lineage valuable for the study of the early diversification of Staphylinidae, where sister group relationships of Megalopsidiinae currently remain a big controversy. This discovery corroborates the Mesozoic origin of this subfamily implied by its presumably basal phylogenetic position within Staphylinidae and hitherto available fossil record for the family. Well preserved peculiar mouthparts of M. extinctus specialized similarly with recent Megalopinus suggest the same mode of feeding in Megalopsidiinae for nearly a hundred million years.